RNA–Protein interactions for RNA: YBL017C

PEP1, Transcript of Type I transmembrane sorting receptor for multiple vacuolar hydrolases, yeastyeast

Gene PEP1, Length 4,740 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP1YBL017C ICL2Q12031 575 aa2.27□□□□□ -2.05
PEP1YBL017C RAD2P07276 1031 aa2.27□□□□□ -2.05
PEP1YBL017C FRD1P32614 470 aaKnown RBP2.27□□□□□ -2.05
PEP1YBL017C STV1P37296 890 aa2.27□□□□□ -2.05
PEP1YBL017C RFT1P38206 574 aaPredicted RBP2.27□□□□□ -2.05
PEP1YBL017C ERG7P38604 731 aa2.27□□□□□ -2.05
PEP1YBL017C AIM9P40053 627 aaKnown RBP2.27□□□□□ -2.05
PEP1YBL017C YLR225CQ05948 407 aaKnown RBP2.27□□□□□ -2.05
PEP1YBL017C YLR407WQ06070 228 aa2.27□□□□□ -2.05
PEP1YBL017C CUR1Q06469 252 aa2.27□□□□□ -2.05
PEP1YBL017C ICL1P28240 557 aaPredicted RBP2.27□□□□□ -2.05
PEP1YBL017C DLD1P32891 587 aa2.27□□□□□ -2.05
PEP1YBL017C YFL040WP43562 540 aa2.27□□□□□ -2.05
PEP1YBL017C EAR1Q03212 550 aa2.27□□□□□ -2.05
PEP1YBL017C NOT3P06102 836 aaKnown RBP2.27□□□□□ -2.05
PEP1YBL017C CBP3P21560 335 aa2.27□□□□□ -2.05
PEP1YBL017C VPS29P38759 282 aa2.27□□□□□ -2.05
PEP1YBL017C NMD2P38798 1089 aaKnown RBP2.27□□□□□ -2.05
PEP1YBL017C YAP1801P38856 637 aa2.27□□□□□ -2.05
PEP1YBL017C ROG3P43602 733 aa2.27□□□□□ -2.05
PEP1YBL017C RPT4P53549 437 aaKnown RBP2.27□□□□□ -2.05
PEP1YBL017C ALO1P54783 526 aaKnown RBP2.27□□□□□ -2.05
PEP1YBL017C MDM20Q12387 796 aaKnown RBP2.27□□□□□ -2.05
PEP1YBL017C RSC30P38781 883 aa2.26□□□□□ -2.05
PEP1YBL017C NIT1P40447 199 aa2.26□□□□□ -2.05
PEP1YBL017C SPO22P40511 975 aa2.26□□□□□ -2.05
PEP1YBL017C THI6P41835 540 aa2.26□□□□□ -2.05
PEP1YBL017C POL32P47110 350 aa2.26□□□□□ -2.05
PEP1YBL017C HPC2Q01448 625 aa2.26□□□□□ -2.05
PEP1YBL017C UBX5Q06682 500 aa2.26□□□□□ -2.05
PEP1YBL017C TIF1P10081 395 aaKnown RBP2.26□□□□□ -2.05
PEP1YBL017C SRM1P21827 482 aa2.26□□□□□ -2.05
PEP1YBL017C CRG1P38892 291 aaRIP-Chip data2.26□□□□□ -2.05 RIP-Chip
PEP1YBL017C SPR3P41901 512 aa2.26□□□□□ -2.05
PEP1YBL017C PTA1Q01329 785 aaPredicted RBP2.26□□□□□ -2.05
PEP1YBL017C RPL22AP05749 121 aaKnown RBP2.26□□□□□ -2.05
PEP1YBL017C MRF1P30775 413 aaPredicted RBP2.26□□□□□ -2.05
PEP1YBL017C RTS1P38903 757 aa2.26□□□□□ -2.05
PEP1YBL017C HYR1P40581 163 aaKnown RBP2.26□□□□□ -2.05
PEP1YBL017C SEC20P28791 383 aa2.26□□□□□ -2.05
PEP1YBL017C GPB2P39717 880 aa2.26□□□□□ -2.05
PEP1YBL017C TIF4632P39936 914 aaKnown RBP2.26□□□□□ -2.05
PEP1YBL017C BRE1Q07457 700 aaKnown RBP2.26□□□□□ -2.05
PEP1YBL017C PKC1P24583 1151 aa2.25□□□□□ -2.05
PEP1YBL017C DBP7P36120 742 aaKnown RBP2.25□□□□□ -2.05
PEP1YBL017C OPY1P38271 328 aa2.25□□□□□ -2.05
PEP1YBL017C FPR3P38911 411 aaKnown RBP2.25□□□□□ -2.05
PEP1YBL017C ALD6P54115 500 aaKnown RBP2.25□□□□□ -2.05
PEP1YBL017C SPH1Q06160 661 aa2.25□□□□□ -2.05
PEP1YBL017C HEM1P09950 548 aaPredicted RBP2.25□□□□□ -2.05
PEP1YBL017C YGR130CP53278 816 aa2.25□□□□□ -2.05
PEP1YBL017C WHI4Q07655 649 aaKnown RBP2.25□□□□□ -2.05
PEP1YBL017C TOP1P04786 769 aa2.25□□□□□ -2.05
PEP1YBL017C PRE8P23639 250 aa2.25□□□□□ -2.05
PEP1YBL017C AVT3P36062 692 aa2.25□□□□□ -2.05
PEP1YBL017C AAP1P37898 856 aaKnown RBP2.25□□□□□ -2.05
PEP1YBL017C GRS1P38088 690 aaKnown RBP2.25□□□□□ -2.05
PEP1YBL017C YGL082WP53155 381 aa2.25□□□□□ -2.05
PEP1YBL017C ERG12P07277 443 aa2.25□□□□□ -2.05
PEP1YBL017C YDJ1P25491 409 aaKnown RBP2.25□□□□□ -2.05
PEP1YBL017C KTR1P27810 393 aaKnown RBP2.25□□□□□ -2.05
PEP1YBL017C SER1P33330 395 aaKnown RBP2.25□□□□□ -2.05
PEP1YBL017C CAB3P36076 571 aa2.25□□□□□ -2.05
PEP1YBL017C YKR018CP36114 725 aa2.25□□□□□ -2.05
PEP1YBL017C SPE3Q12074 293 aaKnown RBP2.25□□□□□ -2.05
PEP1YBL017C YPL150WQ12152 901 aa2.25□□□□□ -2.05
PEP1YBL017C ISF1P32488 338 aa2.24□□□□□ -2.05
PEP1YBL017C NAB3P38996 802 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
PEP1YBL017C CDC60P26637 1090 aaKnown RBP2.24□□□□□ -2.05
PEP1YBL017C SEC8P32855 1065 aa2.24□□□□□ -2.05
PEP1YBL017C PXL1P36166 706 aa2.24□□□□□ -2.05
PEP1YBL017C GRX7P38068 203 aa2.24□□□□□ -2.05
PEP1YBL017C RPN1P38764 993 aaKnown RBP2.24□□□□□ -2.05
PEP1YBL017C MRPS35P53292 345 aa2.24□□□□□ -2.05
PEP1YBL017C RGT1P32862 1170 aa2.24□□□□□ -2.05
PEP1YBL017C BOI1P38041 980 aaKnown RBP2.24□□□□□ -2.05
PEP1YBL017C DMA1P38823 416 aa2.24□□□□□ -2.05
PEP1YBL017C TOM71P38825 639 aaKnown RBP2.24□□□□□ -2.05
PEP1YBL017C CCT3P39077 534 aaKnown RBP2.24□□□□□ -2.05
PEP1YBL017C SSF2Q12153 453 aaPredicted RBP2.24□□□□□ -2.05
PEP1YBL017C SAS4Q04003 481 aa2.23□□□□□ -2.05
PEP1YBL017C SUB2Q07478 446 aaKnown RBP2.23□□□□□ -2.05
PEP1YBL017C MATALPHA2P0CY08 210 aa2.23□□□□□ -2.05
PEP1YBL017C HMLALPHA2P0CY09 210 aa2.23□□□□□ -2.05
PEP1YBL017C SRO9P25567 434 aaKnown RBP2.23□□□□□ -2.05
PEP1YBL017C ASH1P34233 588 aa2.23□□□□□ -2.05
PEP1YBL017C OCT1P35999 772 aa2.23□□□□□ -2.05
PEP1YBL017C NUP133P36161 1157 aa2.23□□□□□ -2.05
PEP1YBL017C CST26P38226 397 aa2.23□□□□□ -2.05
PEP1YBL017C YGL138CP53122 345 aa2.23□□□□□ -2.05
PEP1YBL017C PAP2P53632 584 aaKnown RBP2.23□□□□□ -2.05
PEP1YBL017C MDM1Q01846 1127 aa2.23□□□□□ -2.05
PEP1YBL017C RPN7Q06103 429 aaKnown RBP2.23□□□□□ -2.05
PEP1YBL017C STT4P37297 1900 aa2.23□□□□□ -2.05
PEP1YBL017C KIN82P25341 720 aa2.23□□□□□ -2.05
PEP1YBL017C RPS7AP26786 190 aaKnown RBP2.23□□□□□ -2.05
PEP1YBL017C BCS1P32839 456 aa2.23□□□□□ -2.05
PEP1YBL017C YGR125WP53273 1036 aa2.23□□□□□ -2.05
PEP1YBL017C RPS15Q01855 142 aaKnown RBP2.23□□□□□ -2.05
PEP1YBL017C TY1B-AO13527 1196 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms