RNA–Protein interactions for RNA: YAL009W

SPO7, Transcript of Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme, yeastyeast

Gene SPO7, Length 780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO7YAL009W YNL050CP53952 270 aa7.53□□□□□ -1.2
SPO7YAL009W GBP2P25555 427 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21not detected
SPO7YAL009W RPN1P38764 993 aaKnown RBP7.52□□□□□ -1.21
SPO7YAL009W RTR1P40084 226 aaPredicted RBP7.52□□□□□ -1.21
SPO7YAL009W MDG1P53885 366 aa7.52□□□□□ -1.21
SPO7YAL009W YPL062WQ02781 134 aa7.52□□□□□ -1.21
SPO7YAL009W YDR444WQ04093 687 aa7.52□□□□□ -1.21
SPO7YAL009W SSP2Q08646 371 aa7.52□□□□□ -1.21
SPO7YAL009W PRD1P25375 712 aa7.51□□□□□ -1.21
SPO7YAL009W UGA3P26370 528 aa7.51□□□□□ -1.21
SPO7YAL009W APL2P36000 726 aaPredicted RBP7.51□□□□□ -1.21
SPO7YAL009W MRT4P33201 236 aaKnown RBP7.5□□□□□ -1.21
SPO7YAL009W ZDS2P54786 942 aa7.5□□□□□ -1.21
SPO7YAL009W NSE3Q05541 303 aa7.5□□□□□ -1.21
SPO7YAL009W YPR204WQ08995 1032 aa7.5□□□□□ -1.21
SPO7YAL009W TOP1P04786 769 aa7.49□□□□□ -1.21
SPO7YAL009W ICL1P28240 557 aaPredicted RBP7.49□□□□□ -1.21
SPO7YAL009W GUA1P38625 525 aaKnown RBP7.49□□□□□ -1.21
SPO7YAL009W RAT1Q02792 1006 aaKnown RBP7.49□□□□□ -1.21
SPO7YAL009W BDF2Q07442 638 aa7.49□□□□□ -1.21
SPO7YAL009W COQ4O13525 335 aa7.48□□□□□ -1.21
SPO7YAL009W SSA4P22202 642 aaKnown RBP7.48□□□□□ -1.21
SPO7YAL009W FIG4P42837 879 aa7.48□□□□□ -1.21
SPO7YAL009W ZDS1P50111 915 aaKnown RBP7.48□□□□□ -1.21
SPO7YAL009W ERO1Q03103 563 aa7.48□□□□□ -1.21
SPO7YAL009W LCB5Q06147 687 aaKnown RBP7.48□□□□□ -1.21
SPO7YAL009W THI22Q06490 572 aa7.48□□□□□ -1.21
SPO7YAL009W IRC3Q06683 689 aa7.48□□□□□ -1.21
SPO7YAL009W YBR287WP38355 427 aa7.47□□□□□ -1.21
SPO7YAL009W PTK2P47116 818 aaKnown RBP7.47□□□□□ -1.21
SPO7YAL009W BMS1Q08965 1183 aaKnown RBP7.47□□□□□ -1.21
SPO7YAL009W MPP10P47083 593 aaKnown RBP7.46□□□□□ -1.22
SPO7YAL009W VPS64Q03944 604 aa7.46□□□□□ -1.22
SPO7YAL009W RGA2Q06407 1009 aa7.46□□□□□ -1.22
SPO7YAL009W IOC4Q04213 475 aa7.45□□□□□ -1.22
SPO7YAL009W RTT109Q07794 436 aa7.45□□□□□ -1.22
SPO7YAL009W YKU70P32807 602 aa7.44□□□□□ -1.22
SPO7YAL009W MAM1P40065 302 aa7.44□□□□□ -1.22
SPO7YAL009W UBP16Q02863 499 aa7.44□□□□□ -1.22
SPO7YAL009W DIB1Q06819 143 aaPredicted RBP7.44□□□□□ -1.22
SPO7YAL009W ATG20Q07528 640 aa7.44□□□□□ -1.22
SPO7YAL009W TOM1Q03280 3268 aa7.43□□□□□ -1.22
SPO7YAL009W FRD1P32614 470 aaKnown RBP7.43□□□□□ -1.22
SPO7YAL009W SHC1P39000 512 aa7.43□□□□□ -1.22
SPO7YAL009W YDL176WQ12027 708 aa7.43□□□□□ -1.22
SPO7YAL009W HAT1Q12341 374 aa7.43□□□□□ -1.22
SPO7YAL009W SRF1Q12516 437 aa7.43□□□□□ -1.22
SPO7YAL009W RET1P22276 1149 aaKnown RBP7.42□□□□□ -1.22
SPO7YAL009W GYP7P48365 746 aa7.42□□□□□ -1.22
SPO7YAL009W SYF1Q04048 859 aaPredicted RBP7.42□□□□□ -1.22
SPO7YAL009W YOL057WQ08225 711 aa7.42□□□□□ -1.22
SPO7YAL009W LYS2P07702 1392 aa7.42□□□□□ -1.22
SPO7YAL009W THS1P04801 734 aaKnown RBP7.41□□□□□ -1.22
SPO7YAL009W FCP1Q03254 732 aa7.41□□□□□ -1.22
SPO7YAL009W OPT2Q06593 877 aa7.41□□□□□ -1.22
SPO7YAL009W HEF3P53978 1044 aaKnown RBP7.4□□□□□ -1.22
SPO7YAL009W YPR084WQ06821 456 aa7.4□□□□□ -1.22
SPO7YAL009W YDL144CQ07589 356 aa7.4□□□□□ -1.22
SPO7YAL009W GRX6Q12438 231 aa7.4□□□□□ -1.22
SPO7YAL009W SSK22P25390 1331 aaPredicted RBP7.39□□□□□ -1.23
SPO7YAL009W EMW1P42842 904 aaKnown RBP7.39□□□□□ -1.23
SPO7YAL009W YLR278CQ05854 1341 aa7.38□□□□□ -1.23
SPO7YAL009W RPS9BP05755 195 aaKnown RBP7.38□□□□□ -1.23
SPO7YAL009W MAK16P10962 306 aaPredicted RBP7.38□□□□□ -1.23
SPO7YAL009W TEC1P18412 486 aa7.38□□□□□ -1.23
SPO7YAL009W RTG2P32608 588 aaKnown RBP7.38□□□□□ -1.23
SPO7YAL009W SRT1Q03175 343 aa7.38□□□□□ -1.23
SPO7YAL009W PKH1Q03407 766 aa7.38□□□□□ -1.23
SPO7YAL009W SWI1P09547 1314 aa7.37□□□□□ -1.23
SPO7YAL009W DNM1P54861 757 aa7.37□□□□□ -1.23
SPO7YAL009W YDR306CQ06640 478 aa7.37□□□□□ -1.23
SPO7YAL009W DLD1P32891 587 aa7.36□□□□□ -1.23
SPO7YAL009W AAD14P42884 376 aa7.36□□□□□ -1.23
SPO7YAL009W CAF120P53836 1060 aa7.36□□□□□ -1.23
SPO7YAL009W NUP85P46673 744 aa7.35□□□□□ -1.23
SPO7YAL009W YJR008WP47085 338 aa7.35□□□□□ -1.23
SPO7YAL009W DFG5Q05031 458 aa7.35□□□□□ -1.23
SPO7YAL009W MSM1P22438 575 aa7.34□□□□□ -1.23
SPO7YAL009W PKC1P24583 1151 aa7.34□□□□□ -1.23
SPO7YAL009W NUP133P36161 1157 aa7.34□□□□□ -1.23
SPO7YAL009W FET4P40988 552 aa7.34□□□□□ -1.23
SPO7YAL009W YGR122WP53272 402 aa7.34□□□□□ -1.23
SPO7YAL009W GAS5Q08193 484 aa7.34□□□□□ -1.23
SPO7YAL009W PMD1P32634 1753 aa7.33□□□□□ -1.24
SPO7YAL009W UTP10P42945 1769 aaKnown RBP7.33□□□□□ -1.24
SPO7YAL009W MRP7P12687 371 aa7.33□□□□□ -1.24
SPO7YAL009W KRE2P27809 442 aa7.33□□□□□ -1.24
SPO7YAL009W MKS1P34072 584 aa7.33□□□□□ -1.24
SPO7YAL009W ICP55P40051 511 aa7.33□□□□□ -1.24
SPO7YAL009W ITC1P53125 1264 aa7.33□□□□□ -1.24
SPO7YAL009W ARG82P07250 355 aa7.32□□□□□ -1.24
SPO7YAL009W SUI2P20459 304 aaKnown RBP7.32□□□□□ -1.24
SPO7YAL009W SWC3P31376 625 aa7.32□□□□□ -1.24
SPO7YAL009W SPL2P38839 148 aa7.32□□□□□ -1.24
SPO7YAL009W VPS4P52917 437 aa7.32□□□□□ -1.24
SPO7YAL009W TFB3Q03290 321 aa7.32□□□□□ -1.24
SPO7YAL009W DPH6Q12429 685 aa7.32□□□□□ -1.24
SPO7YAL009W ISF1P32488 338 aa7.31□□□□□ -1.24
SPO7YAL009W TRM44Q02648 567 aaKnown RBP7.31□□□□□ -1.24
SPO7YAL009W AFG2P32794 780 aa7.3□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms