RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 ABCC8Q09428 1581 aa11.73□□□□□ -0.53
PTP4A1-202ENST00000470661 PLA2G2CQ5R387 149 aa11.73□□□□□ -0.53
PTP4A1-202ENST00000470661 FGD5Q6ZNL6 1462 aa11.73□□□□□ -0.53
PTP4A1-202ENST00000470661 TARBP1Q13395 1621 aaKnown RBP11.72□□□□□ -0.53
PTP4A1-202ENST00000470661 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.72□□□□□ -0.53
PTP4A1-202ENST00000470661 TSC1Q92574 1164 aa11.71□□□□□ -0.53
PTP4A1-202ENST00000470661 EMID1Q96A84 441 aaPredicted RBP11.71□□□□□ -0.53
PTP4A1-202ENST00000470661 PCMTD1Q96MG8 357 aaPredicted RBP11.71□□□□□ -0.53
PTP4A1-202ENST00000470661 PRKD2Q9BZL6 878 aa11.7□□□□□ -0.54
PTP4A1-202ENST00000470661 GOPCQ9HD26 462 aa11.7□□□□□ -0.54
PTP4A1-202ENST00000470661 EIF4G3O43432 1585 aaKnown RBP11.69□□□□□ -0.54
PTP4A1-202ENST00000470661 CCDC24Q8N4L8 307 aa11.68□□□□□ -0.54
PTP4A1-202ENST00000470661 LIAT1Q6ZQX7 453 aa11.67□□□□□ -0.54
PTP4A1-202ENST00000470661 NUDT12Q9BQG2 462 aa11.66□□□□□ -0.54
PTP4A1-202ENST00000470661 RGS20O76081 388 aa11.65□□□□□ -0.54
PTP4A1-202ENST00000470661 SLC19A1P41440 591 aa11.65□□□□□ -0.54
PTP4A1-202ENST00000470661 DESI1Q6ICB0 168 aa11.65□□□□□ -0.54
PTP4A1-202ENST00000470661 PER1O15534 1290 aaPredicted RBP11.64□□□□□ -0.55
PTP4A1-202ENST00000470661 CCNYL3P0C7X3 344 aa11.63□□□□□ -0.55
PTP4A1-202ENST00000470661 PTPRNQ16849 979 aa11.63□□□□□ -0.55
PTP4A1-202ENST00000470661 PPP2R2DQ66LE6 453 aa11.63□□□□□ -0.55
PTP4A1-202ENST00000470661 LYPD8Q6UX82 237 aa11.62□□□□□ -0.55
PTP4A1-202ENST00000470661 HELBQ8NG08 1087 aaPredicted RBP11.62□□□□□ -0.55
PTP4A1-202ENST00000470661 CHMP7Q8WUX9 453 aaPredicted RBP11.62□□□□□ -0.55
PTP4A1-202ENST00000470661 V9GY48 417 aaPredicted RBP11.62□□□□□ -0.55
PTP4A1-202ENST00000470661 RFC5P40937 340 aa11.61□□□□□ -0.55
PTP4A1-202ENST00000470661 PTCRAQ6ISU1 281 aaPredicted RBP11.61□□□□□ -0.55
PTP4A1-202ENST00000470661 SNAPC4Q5SXM2 1469 aa11.61□□□□□ -0.55
PTP4A1-202ENST00000470661 SYNJ1O43426 1573 aa11.61□□□□□ -0.55
PTP4A1-202ENST00000470661 WRNQ14191 1432 aaPredicted RBP eCLIP11.6□□□□□ -0.55
PTP4A1-202ENST00000470661 AP1G2O75843 785 aa11.6□□□□□ -0.55
PTP4A1-202ENST00000470661 CTDSPL2Q05D32 466 aa11.6□□□□□ -0.55
PTP4A1-202ENST00000470661 CHD1O14646 1710 aa11.6□□□□□ -0.55
PTP4A1-202ENST00000470661 SPRYD7Q5W111 196 aa11.59□□□□□ -0.55
PTP4A1-202ENST00000470661 CYB5RLQ6IPT4 315 aa11.59□□□□□ -0.55
PTP4A1-202ENST00000470661 ZBTB24O43167 697 aaPredicted RBP11.58□□□□□ -0.56
PTP4A1-202ENST00000470661 CTHP32929 405 aa11.58□□□□□ -0.56
PTP4A1-202ENST00000470661 RPIAP49247 311 aa11.58□□□□□ -0.56
PTP4A1-202ENST00000470661 MAP10Q9P2G4 905 aa11.58□□□□□ -0.56
PTP4A1-202ENST00000470661 GAPVD1Q14C86 1478 aa11.57□□□□□ -0.56
PTP4A1-202ENST00000470661 LRRN4Q8WUT4 740 aa11.57□□□□□ -0.56
PTP4A1-202ENST00000470661 EVA1BQ9NVM1 165 aa11.57□□□□□ -0.56
PTP4A1-202ENST00000470661 KCNH2Q12809 1159 aa11.56□□□□□ -0.56
PTP4A1-202ENST00000470661 TRIM32Q13049 653 aa11.56□□□□□ -0.56
PTP4A1-202ENST00000470661 GRIN2BQ13224 1484 aa11.56□□□□□ -0.56
PTP4A1-202ENST00000470661 F12P00748 615 aaPredicted RBP11.55□□□□□ -0.56
PTP4A1-202ENST00000470661 ZNF697Q5TEC3 545 aa11.55□□□□□ -0.56
PTP4A1-202ENST00000470661 RIMBP3CA6NJZ7 1639 aa11.55□□□□□ -0.56
PTP4A1-202ENST00000470661 RIMBP3BA6NNM3 1639 aa11.55□□□□□ -0.56
PTP4A1-202ENST00000470661 RIMBP3Q9UFD9 1639 aa11.55□□□□□ -0.56
PTP4A1-202ENST00000470661 UNC93B1Q9H1C4 597 aa11.54□□□□□ -0.56
PTP4A1-202ENST00000470661 ABCA10Q8WWZ4 1543 aa11.54□□□□□ -0.56
PTP4A1-202ENST00000470661 TOP2BQ02880 1626 aa11.53□□□□□ -0.56
PTP4A1-202ENST00000470661 CD2BP2O95400 341 aaKnown RBP11.53□□□□□ -0.56
PTP4A1-202ENST00000470661 USP17L8P0C7I0 530 aa11.53□□□□□ -0.56
PTP4A1-202ENST00000470661 ZNF598Q86UK7 904 aaKnown RBP11.53□□□□□ -0.56
PTP4A1-202ENST00000470661 WDR97A6NE52 1622 aa11.53□□□□□ -0.56
PTP4A1-202ENST00000470661 ARHGEF11O15085 1522 aa11.52□□□□□ -0.57
PTP4A1-202ENST00000470661 TMEM259Q4ZIN3 620 aa11.51□□□□□ -0.57
PTP4A1-202ENST00000470661 BIVM-ERCC5R4GMW8 1640 aa11.5□□□□□ -0.57
PTP4A1-202ENST00000470661 FOXC1Q12948 553 aa11.5□□□□□ -0.57
PTP4A1-202ENST00000470661 LINC01559Q495D7 138 aa11.5□□□□□ -0.57
PTP4A1-202ENST00000470661 HMX1Q9NP08 348 aaPredicted RBP11.5□□□□□ -0.57
PTP4A1-202ENST00000470661 PBRM1Q86U86 1689 aa11.49□□□□□ -0.57
PTP4A1-202ENST00000470661 SKOR1P84550 965 aa11.49□□□□□ -0.57
PTP4A1-202ENST00000470661 TMEM132AQ24JP5 1023 aa11.49□□□□□ -0.57
PTP4A1-202ENST00000470661 TRIM67Q6ZTA4 783 aa11.49□□□□□ -0.57
PTP4A1-202ENST00000470661 BAP1Q92560 729 aa11.49□□□□□ -0.57
PTP4A1-202ENST00000470661 SYNJ2O15056 1496 aa11.49□□□□□ -0.57
PTP4A1-202ENST00000470661 MAGI1Q96QZ7 1491 aaPredicted RBP11.49□□□□□ -0.57
PTP4A1-202ENST00000470661 ABCA5Q8WWZ7 1642 aa11.49□□□□□ -0.57
PTP4A1-202ENST00000470661 TNFRSF10AO00220 468 aa11.48□□□□□ -0.57
PTP4A1-202ENST00000470661 NR6A1Q15406 480 aa11.47□□□□□ -0.57
PTP4A1-202ENST00000470661 EPS8L1Q8TE68 723 aa11.47□□□□□ -0.57
PTP4A1-202ENST00000470661 PKD2L1Q9P0L9 805 aa11.47□□□□□ -0.57
PTP4A1-202ENST00000470661 IRX2Q9BZI1 471 aaPredicted RBP11.46□□□□□ -0.57
PTP4A1-202ENST00000470661 PDZRN3Q9UPQ7 1066 aa11.46□□□□□ -0.57
PTP4A1-202ENST00000470661 ARAP1Q96P48 1450 aa11.45□□□□□ -0.58
PTP4A1-202ENST00000470661 SH3BP2P78314 561 aa11.45□□□□□ -0.58
PTP4A1-202ENST00000470661 GDF9O60383 454 aa11.44□□□□□ -0.58
PTP4A1-202ENST00000470661 WNT7BP56706 349 aa11.44□□□□□ -0.58
PTP4A1-202ENST00000470661 ZNF511Q8NB15 262 aa11.44□□□□□ -0.58
PTP4A1-202ENST00000470661 GFRA3O60609 400 aa11.43□□□□□ -0.58
PTP4A1-202ENST00000470661 RC3H1Q5TC82 1133 aaKnown RBP11.43□□□□□ -0.58
PTP4A1-202ENST00000470661 SNRKQ9NRH2 765 aa11.43□□□□□ -0.58
PTP4A1-202ENST00000470661 CLASP1Q7Z460 1538 aa11.43□□□□□ -0.58
PTP4A1-202ENST00000470661 BANK1Q8NDB2 785 aa11.42□□□□□ -0.58
PTP4A1-202ENST00000470661 IGF1RP08069 1367 aa11.41□□□□□ -0.58
PTP4A1-202ENST00000470661 ERCC6L2Q5T890 1561 aa11.41□□□□□ -0.58
PTP4A1-202ENST00000470661 GRIN2AQ12879 1464 aa11.41□□□□□ -0.58
PTP4A1-202ENST00000470661 WNT7AO00755 349 aa11.41□□□□□ -0.58
PTP4A1-202ENST00000470661 MTMR14Q8NCE2 650 aa11.41□□□□□ -0.58
PTP4A1-202ENST00000470661 FOXJ1Q92949 421 aa11.41□□□□□ -0.58
PTP4A1-202ENST00000470661 MRGPRX2Q96LB1 330 aa11.41□□□□□ -0.58
PTP4A1-202ENST00000470661 TRIM34Q9BYJ4 488 aa11.41□□□□□ -0.58
PTP4A1-202ENST00000470661 FHAD1B1AJZ9 1412 aa11.4□□□□□ -0.58
PTP4A1-202ENST00000470661 ADAMTS12P58397 1594 aa11.4□□□□□ -0.58
PTP4A1-202ENST00000470661 PRR20EP86478 221 aa11.39□□□□□ -0.59
PTP4A1-202ENST00000470661 PRR20CP86479 221 aa11.39□□□□□ -0.59
PTP4A1-202ENST00000470661 PRR20DP86480 221 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms