RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Tspyl2Q7TQI8 677 aa13.17□□□□□ -0.3
Cpsf3-211ENSMUST00000222968 Dusp27Q148W8 1138 aa13.16□□□□□ -0.3
Cpsf3-211ENSMUST00000222968 Ciz1Q8VEH2 845 aa13.16□□□□□ -0.3
Cpsf3-211ENSMUST00000222968 Kif1aP33173 1695 aa13.16□□□□□ -0.3
Cpsf3-211ENSMUST00000222968 PtpruB1AUH1 1446 aa13.16□□□□□ -0.3
Cpsf3-211ENSMUST00000222968 Alpk3Q924C5 1678 aa13.15□□□□□ -0.3
Cpsf3-211ENSMUST00000222968 AampJ3QN89 436 aa13.15□□□□□ -0.3
Cpsf3-211ENSMUST00000222968 Pank1Q8K4K6 548 aa13.15□□□□□ -0.3
Cpsf3-211ENSMUST00000222968 EspnQ9ET47 871 aa13.15□□□□□ -0.3
Cpsf3-211ENSMUST00000222968 Pik3r4Q8VD65 1358 aa13.15□□□□□ -0.3
Cpsf3-211ENSMUST00000222968 Tnrc6bQ8BKI2 1810 aaKnown RBP13.14□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Mapk8ip3Q9ESN9 1337 aa13.14□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Pik3c2bE9QAN8 1632 aa13.14□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 PaskQ8CEE6 1383 aa13.13□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Cavin4A2AMM0 362 aa13.13□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Psme1P97371 249 aa13.13□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Ksr2Q3UVC0 959 aa13.13□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Idi2Q8BFZ6 227 aa13.13□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Ccar1Q8CH18 1146 aaKnown RBP13.13□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Slc12a5Q91V14 1138 aa13.13□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Chd4Q6PDQ2 1915 aaKnown RBP13.13□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Ttc21aQ8C0S4 1314 aa13.13□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Fchsd2Q3USJ8 740 aa13.12□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Q4VA45 678 aa13.12□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Chmp5Q9D7S9 219 aa13.12□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Dip2bQ3UH60 1574 aa13.12□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Arap3Q8R5G7 1538 aa13.12□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 B4galnt3Q6L8S8 986 aa13.12□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Txndc2Q6P902 515 aa13.12□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Atp7bQ64446 1462 aa13.11□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Duxf3A0A0N4SV92 674 aa13.1□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Ankrd50F7BE84 1390 aa13.1□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Spef2Q8C9J3 1734 aa13.1□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Ppp1r15aP17564 657 aa13.1□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 CastP51125 788 aa13.09□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Rlbp1Q9Z275 317 aa13.09□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 PzpQ61838 1495 aa13.08□□□□□ -0.31
Cpsf3-211ENSMUST00000222968 Plppr3Q7TPB0 716 aa13.08□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 Sirt1Q923E4 737 aa13.08□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 PalmQ9Z0P4 383 aa13.08□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 Mdc1Q5PSV9 1707 aa13.08□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 Dbr1Q923B1 550 aa13.08□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 N4bp2F8VQG7 1678 aaKnown RBP13.07□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 CatipB9EKE5 520 aa13.07□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 Hoxb7P09024 217 aa13.07□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 Uhrf1bp1lA2RSJ4 1457 aa13.06□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 Swt1Q9DBQ9 907 aa13.06□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 Med1Q925J9 1575 aa13.05□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 Nkx1-2P42580 305 aa13.05□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 Znf316Q6PGE4 1016 aa13.04□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 NalcnQ8BXR5 1738 aa13.04□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 Rbm25B2RY56 838 aaKnown RBP13.04□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 Birc3O08863 600 aa13.04□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 NudcO35685 332 aaKnown RBP13.04□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 Rsph6aQ8CDR2 708 aa13.04□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 Polr3glQ8R0C0 218 aa13.04□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 HnrnpmQ9D0E1 729 aaKnown RBP13.04□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 Ppp1r3fQ9JIG4 799 aa13.04□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 Ccdc171E9Q1U1 1324 aa13.03□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 Rreb1Q3UH06 1700 aaKnown RBP13.03□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 D430041D05RikF6ZGR6 1678 aa13.02□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 Trim26Q99PN3 545 aa13.02□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 Znf335A2A5K6 1337 aa13.02□□□□□ -0.32
Cpsf3-211ENSMUST00000222968 Lmtk3Q5XJV6 1424 aa13.02□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Astn2Q80Z10 1352 aa13.01□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 ChgaP26339 463 aaKnown RBP13.01□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Tmc1Q8R4P5 757 aa13.01□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Rims2Q9EQZ7 1530 aa13□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 CemipQ8BI06 1361 aa13□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Mon2Q80TL7 1715 aa13□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Q3UJC8 639 aa12.99□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Ccdc60Q8C4J0 545 aa12.99□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Kif20bQ80WE4 1774 aaKnown RBP12.99□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Als2Q920R0 1651 aa12.99□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Ubr1O70481 1757 aa12.99□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 C5P06684 1680 aa12.99□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Pik3c2aQ61194 1686 aa12.98□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Hs1bp3Q3TC93 395 aa12.98□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Abcc10Q8R4P9 1501 aa12.98□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Atl3Q91YH5 541 aa12.97□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Cdc37l1Q9CZP7 335 aa12.97□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Bcl9Q9D219 1425 aa12.97□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Map2P20357 1828 aa12.97□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Vamp4O70480 141 aa12.97□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 G3bp1P97855 465 aaKnown RBP12.97□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Ccdc27Q3V036 639 aa12.97□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Cdk12Q14AX6 1484 aaKnown RBP12.96□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Ccdc183A2AJB1 534 aa12.96□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Maco1Q7TQE6 664 aaKnown RBP12.96□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Safb2Q80YR5 991 aaKnown RBP12.96□□□□□ -0.33
Cpsf3-211ENSMUST00000222968 Col16a1Q8BLX7 1580 aa12.96□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Gnai1B2RSH2 354 aa12.95□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Eif4a2P10630 407 aa12.95□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Ipo8Q7TMY7 1010 aa12.95□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Plekhm2Q80TQ5 1018 aa12.95□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Ak7Q9D2H2 614 aa12.95□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Iqcf3Q9D498 203 aa12.95□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Gnai3Q9DC51 354 aa12.95□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Nsd3Q6P2L6 1439 aa12.95□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Scn7aB1AYL1 1681 aa12.95□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms