RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 NischQ80TM9 1593 aa20.31■□□□□ 0.84
Cpsf3-211ENSMUST00000222968 Gm35339A0A140LHH9 1649 aa20.16■□□□□ 0.82
Cpsf3-211ENSMUST00000222968 Abcc9P70170 1546 aa19.77■□□□□ 0.76
Cpsf3-211ENSMUST00000222968 Abcc8B2RUS7 1588 aa19.37■□□□□ 0.69
Cpsf3-211ENSMUST00000222968 Rhox8Q6VSS7 320 aa18.46■□□□□ 0.54
Cpsf3-211ENSMUST00000222968 Rtl1Q7M732 1744 aa18.35■□□□□ 0.53
Cpsf3-211ENSMUST00000222968 ScribQ80U72 1612 aa18.13■□□□□ 0.49
Cpsf3-211ENSMUST00000222968 Dcaf1Q80TR8 1506 aa18.12■□□□□ 0.49
Cpsf3-211ENSMUST00000222968 Ccdc180J3QNE4 1664 aa17.94■□□□□ 0.46
Cpsf3-211ENSMUST00000222968 Rb1cc1Q9ESK9 1588 aa17.78■□□□□ 0.44
Cpsf3-211ENSMUST00000222968 Zcchc6Q5BLK4 1491 aaKnown RBP17.76■□□□□ 0.43
Cpsf3-211ENSMUST00000222968 Kdm5dQ62240 1548 aa17.73■□□□□ 0.43
Cpsf3-211ENSMUST00000222968 NacadQ5SWP3 1504 aa17.61■□□□□ 0.41
Cpsf3-211ENSMUST00000222968 Baz1aO88379 1555 aa17.6■□□□□ 0.41
Cpsf3-211ENSMUST00000222968 Crybg2B7ZCC2 1516 aa17.37■□□□□ 0.37
Cpsf3-211ENSMUST00000222968 Sycp2Q9CUU3 1500 aa17.24■□□□□ 0.35
Cpsf3-211ENSMUST00000222968 Smarca2Q6DIC0 1577 aa17.22■□□□□ 0.35
Cpsf3-211ENSMUST00000222968 Ccdc136Q3TVA9 1136 aa17.14■□□□□ 0.33
Cpsf3-211ENSMUST00000222968 HrcG5E8J6 738 aa17.1■□□□□ 0.33
Cpsf3-211ENSMUST00000222968 BicraF8VPZ9 1578 aa16.88■□□□□ 0.29
Cpsf3-211ENSMUST00000222968 Trim41Q5NCC3 630 aa16.88■□□□□ 0.29
Cpsf3-211ENSMUST00000222968 Cecr2E9Q2Z1 1453 aa16.77■□□□□ 0.28
Cpsf3-211ENSMUST00000222968 Brd4Q9ESU6 1400 aaKnown RBP16.73■□□□□ 0.27
Cpsf3-211ENSMUST00000222968 Cep164Q5DU05 1446 aa16.65■□□□□ 0.26
Cpsf3-211ENSMUST00000222968 Synj1Q8CHC4 1574 aa16.62■□□□□ 0.25
Cpsf3-211ENSMUST00000222968 Rpgrip1Q9EPQ2 1331 aa16.55■□□□□ 0.24
Cpsf3-211ENSMUST00000222968 CftrP26361 1476 aa16.55■□□□□ 0.24
Cpsf3-211ENSMUST00000222968 Golga3P55937 1487 aa16.53■□□□□ 0.24
Cpsf3-211ENSMUST00000222968 Rsf1E9PWW9 1441 aaKnown RBP16.48■□□□□ 0.23
Cpsf3-211ENSMUST00000222968 Cttnbp2B9EJA2 1648 aa16.48■□□□□ 0.23
Cpsf3-211ENSMUST00000222968 Smarca4Q3TKT4 1613 aaKnown RBP16.45■□□□□ 0.22
Cpsf3-211ENSMUST00000222968 Top2bQ64511 1612 aa16.42■□□□□ 0.22
Cpsf3-211ENSMUST00000222968 Acin1Q9JIX8 1338 aaKnown RBP16.42■□□□□ 0.22
Cpsf3-211ENSMUST00000222968 Cngb1E1AZ71 1325 aa16.4■□□□□ 0.22
Cpsf3-211ENSMUST00000222968 Chic1Q8CBW7 227 aa16.39■□□□□ 0.22
Cpsf3-211ENSMUST00000222968 Ccdc88bQ4QRL3 1481 aa16.39■□□□□ 0.21
Cpsf3-211ENSMUST00000222968 Ehmt2Q9Z148 1263 aaKnown RBP16.3■□□□□ 0.2
Cpsf3-211ENSMUST00000222968 Iqgap2Q3UQ44 1575 aa16.23■□□□□ 0.19
Cpsf3-211ENSMUST00000222968 Esf1Q3V1V3 845 aaKnown RBP16.22■□□□□ 0.19
Cpsf3-211ENSMUST00000222968 Cc2d2aQ8CFW7 1633 aa16.19■□□□□ 0.18
Cpsf3-211ENSMUST00000222968 Atad2bE9Q166 1460 aaKnown RBP16.19■□□□□ 0.18
Cpsf3-211ENSMUST00000222968 Fmn1Q05860 1466 aa16.12■□□□□ 0.17
Cpsf3-211ENSMUST00000222968 Gab3Q8BSM5 595 aa16.11■□□□□ 0.17
Cpsf3-211ENSMUST00000222968 Pds5bQ4VA53 1446 aaKnown RBP16.1■□□□□ 0.17
Cpsf3-211ENSMUST00000222968 Top2aQ01320 1528 aaKnown RBP16.06■□□□□ 0.16
Cpsf3-211ENSMUST00000222968 Rapgef2Q8CHG7 1496 aa15.99■□□□□ 0.15
Cpsf3-211ENSMUST00000222968 TnnQ80Z71 1560 aa15.96■□□□□ 0.15
Cpsf3-211ENSMUST00000222968 Wdr62Q3U3T8 1523 aa15.95■□□□□ 0.14
Cpsf3-211ENSMUST00000222968 Frmpd1A2AKB4 1549 aa15.94■□□□□ 0.14
Cpsf3-211ENSMUST00000222968 Thoc2B1AZI6 1594 aaKnown RBP15.93■□□□□ 0.14
Cpsf3-211ENSMUST00000222968 Cep162Q6ZQ06 1403 aa15.83■□□□□ 0.12
Cpsf3-211ENSMUST00000222968 Eif4g1Q6NZJ6 1600 aaKnown RBP15.82■□□□□ 0.12
Cpsf3-211ENSMUST00000222968 Lamc3Q9R0B6 1581 aa15.82■□□□□ 0.12
Cpsf3-211ENSMUST00000222968 Unc13aQ4KUS2 1712 aa15.81■□□□□ 0.12
Cpsf3-211ENSMUST00000222968 Ercc6F8VPZ5 1481 aa15.77■□□□□ 0.12
Cpsf3-211ENSMUST00000222968 Dnajc5bQ9CQ94 199 aa15.71■□□□□ 0.11
Cpsf3-211ENSMUST00000222968 NrkQ9R0G8 1455 aa15.66■□□□□ 0.1
Cpsf3-211ENSMUST00000222968 Kif15Q6P9L6 1387 aa15.65■□□□□ 0.1
Cpsf3-211ENSMUST00000222968 Camsap1A2AHC3 1581 aa15.65■□□□□ 0.1
Cpsf3-211ENSMUST00000222968 Mier1Q5UAK0 511 aa15.65■□□□□ 0.1
Cpsf3-211ENSMUST00000222968 PtprkP35822 1457 aa15.63■□□□□ 0.09
Cpsf3-211ENSMUST00000222968 Arhgap35Q91YM2 1499 aa15.62■□□□□ 0.09
Cpsf3-211ENSMUST00000222968 Fam135aQ6NS59 1506 aa15.59■□□□□ 0.09
Cpsf3-211ENSMUST00000222968 Npm2Q80W85 207 aa15.59■□□□□ 0.09
Cpsf3-211ENSMUST00000222968 Shroom4Q1W617 1475 aa15.58■□□□□ 0.09
Cpsf3-211ENSMUST00000222968 NefmP08553 848 aa15.57■□□□□ 0.08
Cpsf3-211ENSMUST00000222968 Pcgf6Q99NA9 353 aa15.57■□□□□ 0.08
Cpsf3-211ENSMUST00000222968 Phldb1Q6PDH0 1371 aaKnown RBP15.56■□□□□ 0.08
Cpsf3-211ENSMUST00000222968 Myt1lP97500 1187 aa15.55■□□□□ 0.08
Cpsf3-211ENSMUST00000222968 Map3k1P53349 1493 aa15.53■□□□□ 0.08
Cpsf3-211ENSMUST00000222968 Grin2bQ01097 1482 aa15.53■□□□□ 0.08
Cpsf3-211ENSMUST00000222968 Ccdc18Q640L5 1455 aa15.52■□□□□ 0.07
Cpsf3-211ENSMUST00000222968 Clip1Q922J3 1391 aa15.51■□□□□ 0.07
Cpsf3-211ENSMUST00000222968 UbtfP25976 765 aaKnown RBP15.45■□□□□ 0.06
Cpsf3-211ENSMUST00000222968 Il27Q8K3I6 234 aa15.45■□□□□ 0.06
Cpsf3-211ENSMUST00000222968 Mroh2bQ7M6Y6 1581 aa15.43■□□□□ 0.06
Cpsf3-211ENSMUST00000222968 Arap1Q4LDD4 1452 aa15.43■□□□□ 0.06
Cpsf3-211ENSMUST00000222968 Cux2P70298 1426 aa15.43■□□□□ 0.06
Cpsf3-211ENSMUST00000222968 Eea1Q8BL66 1411 aa15.42■□□□□ 0.06
Cpsf3-211ENSMUST00000222968 AqrQ8CFQ3 1481 aaKnown RBP15.39■□□□□ 0.05
Cpsf3-211ENSMUST00000222968 Supt5hO55201 1082 aaKnown RBP15.39■□□□□ 0.05
Cpsf3-211ENSMUST00000222968 Arhgef5E9Q7D5 1581 aa15.38■□□□□ 0.05
Cpsf3-211ENSMUST00000222968 Efcab5A0JP43 1406 aa15.36■□□□□ 0.05
Cpsf3-211ENSMUST00000222968 Ubl4bQ9CQ84 188 aa15.36■□□□□ 0.05
Cpsf3-211ENSMUST00000222968 Ncapd3Q6ZQK0 1506 aa15.36■□□□□ 0.05
Cpsf3-211ENSMUST00000222968 Erich3F6QRE9 1637 aa15.36■□□□□ 0.05
Cpsf3-211ENSMUST00000222968 Baz1bQ9Z277 1479 aa15.34■□□□□ 0.05
Cpsf3-211ENSMUST00000222968 Plekhg3Q4VAC9 1341 aa15.33■□□□□ 0.04
Cpsf3-211ENSMUST00000222968 LrpprcQ6PB66 1392 aaKnown RBP15.33■□□□□ 0.04
Cpsf3-211ENSMUST00000222968 Setd5Q5XJV7 1441 aa15.33■□□□□ 0.04
Cpsf3-211ENSMUST00000222968 PogzQ8BZH4 1409 aaKnown RBP15.33■□□□□ 0.04
Cpsf3-211ENSMUST00000222968 Ankrd26Q811D2 1581 aa15.32■□□□□ 0.04
Cpsf3-211ENSMUST00000222968 Duox2A2AQ99 1517 aa15.29■□□□□ 0.04
Cpsf3-211ENSMUST00000222968 Tiam1Q60610 1591 aa15.28■□□□□ 0.04
Cpsf3-211ENSMUST00000222968 Npm1Q61937 292 aaKnown RBP15.28■□□□□ 0.04
Cpsf3-211ENSMUST00000222968 Zeb1Q64318 1117 aa15.28■□□□□ 0.04
Cpsf3-211ENSMUST00000222968 Carmil1Q6EDY6 1374 aa15.25■□□□□ 0.03
Cpsf3-211ENSMUST00000222968 Lmo7E9PYF4 1699 aaKnown RBP15.24■□□□□ 0.03
Cpsf3-211ENSMUST00000222968 Naip1Q9QWK5 1403 aa15.23■□□□□ 0.03
Cpsf3-211ENSMUST00000222968 Pcf11G3X9Z4 1553 aa15.22■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms