RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Usp32F8VPZ3 1604 aa30.92■■■□□ 2.54
Ubp1-203ENSMUST00000116492 Cavin4A2AMM0 362 aa30.92■■■□□ 2.54
Ubp1-203ENSMUST00000116492 PaskQ8CEE6 1383 aa30.91■■■□□ 2.54
Ubp1-203ENSMUST00000116492 Map3k19E9Q3S4 1311 aa30.9■■■□□ 2.54
Ubp1-203ENSMUST00000116492 NudcO35685 332 aaKnown RBP30.9■■■□□ 2.54
Ubp1-203ENSMUST00000116492 Polr3glQ8R0C0 218 aa30.9■■■□□ 2.54
Ubp1-203ENSMUST00000116492 Fchsd2Q3USJ8 740 aa30.89■■■□□ 2.54
Ubp1-203ENSMUST00000116492 Trim28Q62318 834 aa30.89■■■□□ 2.54
Ubp1-203ENSMUST00000116492 Duxf3A0A0N4SV92 674 aa30.88■■■□□ 2.53
Ubp1-203ENSMUST00000116492 ChgaP26339 463 aaKnown RBP30.86■■■□□ 2.53
Ubp1-203ENSMUST00000116492 Nkx1-2P42580 305 aa30.85■■■□□ 2.53
Ubp1-203ENSMUST00000116492 Ttc21aQ8C0S4 1314 aa30.84■■■□□ 2.53
Ubp1-203ENSMUST00000116492 Slc12a5Q91V14 1138 aa30.83■■■□□ 2.53
Ubp1-203ENSMUST00000116492 Psme1P97371 249 aa30.83■■■□□ 2.53
Ubp1-203ENSMUST00000116492 Asxl2Q8BZ32 1370 aa30.81■■■□□ 2.52
Ubp1-203ENSMUST00000116492 Gemin5Q8BX17 1502 aaKnown RBP30.81■■■□□ 2.52
Ubp1-203ENSMUST00000116492 Trim26Q99PN3 545 aa30.81■■■□□ 2.52
Ubp1-203ENSMUST00000116492 Ankrd50F7BE84 1390 aa30.81■■■□□ 2.52
Ubp1-203ENSMUST00000116492 CastP51125 788 aa30.8■■■□□ 2.52
Ubp1-203ENSMUST00000116492 Rlbp1Q9Z275 317 aa30.8■■■□□ 2.52
Ubp1-203ENSMUST00000116492 Txndc2Q6P902 515 aa30.78■■■□□ 2.52
Ubp1-203ENSMUST00000116492 Ppp1r15aP17564 657 aa30.77■■■□□ 2.52
Ubp1-203ENSMUST00000116492 Q4VA45 678 aa30.77■■■□□ 2.52
Ubp1-203ENSMUST00000116492 Idi2Q8BFZ6 227 aa30.77■■■□□ 2.52
Ubp1-203ENSMUST00000116492 Swt1Q9DBQ9 907 aa30.77■■■□□ 2.52
Ubp1-203ENSMUST00000116492 PalmQ9Z0P4 383 aa30.77■■■□□ 2.52
Ubp1-203ENSMUST00000116492 Tmc1Q8R4P5 757 aa30.76■■■□□ 2.52
Ubp1-203ENSMUST00000116492 CanxP35564 591 aaKnown RBP30.76■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Ppm1gQ61074 542 aa30.76■■■□□ 2.51
Ubp1-203ENSMUST00000116492 PtpruB1AUH1 1446 aa30.76■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Atp7bQ64446 1462 aa30.76■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Cps1Q8C196 1500 aa30.76■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Kif1aP33173 1695 aa30.75■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Ccdc171E9Q1U1 1324 aa30.75■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Iqcf3Q9D498 203 aa30.75■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Ipo8Q7TMY7 1010 aa30.73■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Rbm25B2RY56 838 aaKnown RBP30.73■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Pik3r4Q8VD65 1358 aa30.72■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Trim30dE9PWL0 497 aa30.71■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Chd2E9PZM4 1827 aaKnown RBP30.71■■■□□ 2.51
Ubp1-203ENSMUST00000116492 DiexfQ8BTT6 772 aaKnown RBP30.71■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Dnai1Q8C0M8 701 aa30.71■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Atl3Q91YH5 541 aa30.7■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Ccdc183A2AJB1 534 aa30.68■■■□□ 2.5
Ubp1-203ENSMUST00000116492 Birc3O08863 600 aa30.68■■■□□ 2.5
Ubp1-203ENSMUST00000116492 Ak7Q9D2H2 614 aa30.68■■■□□ 2.5
Ubp1-203ENSMUST00000116492 Slit3Q9WVB4 1523 aa30.67■■■□□ 2.5
Ubp1-203ENSMUST00000116492 Hoxb7P09024 217 aa30.67■■■□□ 2.5
Ubp1-203ENSMUST00000116492 Ccdc60Q8C4J0 545 aa30.65■■■□□ 2.5
Ubp1-203ENSMUST00000116492 Hs1bp3Q3TC93 395 aa30.64■■■□□ 2.5
Ubp1-203ENSMUST00000116492 Bcl11aQ9QYE3 773 aa30.64■■■□□ 2.5
Ubp1-203ENSMUST00000116492 Ppp2r3aB2RXC8 1150 aa30.64■■■□□ 2.49
Ubp1-203ENSMUST00000116492 CatipB9EKE5 520 aa30.64■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Spef2Q8C9J3 1734 aa30.63■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Znf316Q6PGE4 1016 aa30.62■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Pik3c2bE9QAN8 1632 aa30.62■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Dip2bQ3UH60 1574 aa30.62■■■□□ 2.49
Ubp1-203ENSMUST00000116492 IghaA0A0A6YXW6 389 aa30.62■■■□□ 2.49
Ubp1-203ENSMUST00000116492 G3bp1P97855 465 aaKnown RBP30.62■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Ppp1r3fQ9JIG4 799 aa30.62■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Tnrc6bQ8BKI2 1810 aaKnown RBP30.62■■■□□ 2.49
Ubp1-203ENSMUST00000116492 4930567H17RikQ3V0K5 233 aa30.61■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Uhrf1bp1lA2RSJ4 1457 aa30.61■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Sirt1Q923E4 737 aa30.6■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Adamtsl3G3UXC7 1706 aa30.6■■■□□ 2.49
Ubp1-203ENSMUST00000116492 PzpQ61838 1495 aa30.59■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Armcx1Q9CX83 456 aa30.58■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Rsph6aQ8CDR2 708 aa30.57■■■□□ 2.48
Ubp1-203ENSMUST00000116492 Hsp90ab1P11499 724 aaKnown RBP30.56■■■□□ 2.48
Ubp1-203ENSMUST00000116492 Mre11Q61216 706 aa30.56■■■□□ 2.48
Ubp1-203ENSMUST00000116492 Maco1Q7TQE6 664 aaKnown RBP30.56■■■□□ 2.48
Ubp1-203ENSMUST00000116492 Cdc37l1Q9CZP7 335 aa30.55■■■□□ 2.48
Ubp1-203ENSMUST00000116492 Sart3Q9JLI8 962 aaKnown RBP30.55■■■□□ 2.48
Ubp1-203ENSMUST00000116492 Gnai1B2RSH2 354 aa30.54■■■□□ 2.48
Ubp1-203ENSMUST00000116492 Gnai3Q9DC51 354 aa30.54■■■□□ 2.48
Ubp1-203ENSMUST00000116492 HnrnpmQ9D0E1 729 aaKnown RBP30.52■■■□□ 2.48
Ubp1-203ENSMUST00000116492 Hsp90aa1P07901 733 aaKnown RBP30.52■■■□□ 2.48
Ubp1-203ENSMUST00000116492 Chd4Q6PDQ2 1915 aaKnown RBP30.51■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Znf335A2A5K6 1337 aa30.51■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Mdc1Q5PSV9 1707 aa30.51■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Astn2Q80Z10 1352 aa30.51■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Arap3Q8R5G7 1538 aa30.5■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Eif2s2Q99L45 331 aaKnown RBP30.5■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Vamp4O70480 141 aa30.49■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Plekhm2Q80TQ5 1018 aa30.49■■■□□ 2.47
Ubp1-203ENSMUST00000116492 KarsQ99MN1 595 aaKnown RBP30.49■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Phlpp2Q8BXA7 1320 aa30.48■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Gm6268A2A3U9 297 aa30.47■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Ppp1r9bQ6R891 817 aaKnown RBP30.47■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Aldh1l1Q8R0Y6 902 aa30.47■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Cluap1Q8R3P7 413 aa30.47■■■□□ 2.47
Ubp1-203ENSMUST00000116492 N4bp2F8VQG7 1678 aaKnown RBP30.46■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Znf330Q922H9 316 aa30.46■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Dnajc5gQ8C632 165 aa30.45■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Sos1Q62245 1319 aa30.45■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Nsd3Q6P2L6 1439 aa30.45■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Q3UJC8 639 aa30.44■■■□□ 2.46
Ubp1-203ENSMUST00000116492 Q3UPC7 1272 aa30.44■■■□□ 2.46
Ubp1-203ENSMUST00000116492 Ccdc9Q8VC31 543 aaKnown RBP30.44■■■□□ 2.46
Ubp1-203ENSMUST00000116492 Cabp2Q9JLK4 216 aa30.43■■■□□ 2.46
Retrieved 100 of 22,080 RNA–protein pairs in 41.6 ms