RNA–Protein interactions for RNA: ENSMUST00000112451.7

Sh3kbp1-204, Transcript of SH3 domain-containing kinase-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Sh3kbp1, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1-204ENSMUST00000112451 Kif20bQ80WE4 1774 aaKnown RBP13.12□□□□□ -0.31
Sh3kbp1-204ENSMUST00000112451 CatipB9EKE5 520 aa13.12□□□□□ -0.31
Sh3kbp1-204ENSMUST00000112451 Zfp777B9EKF4 885 aa13.12□□□□□ -0.31
Sh3kbp1-204ENSMUST00000112451 NalcnQ8BXR5 1738 aa13.12□□□□□ -0.31
Sh3kbp1-204ENSMUST00000112451 Astn2Q80Z10 1352 aa13.12□□□□□ -0.31
Sh3kbp1-204ENSMUST00000112451 Atp7bQ64446 1462 aa13.11□□□□□ -0.31
Sh3kbp1-204ENSMUST00000112451 Als2Q920R0 1651 aa13.11□□□□□ -0.31
Sh3kbp1-204ENSMUST00000112451 Ppp1r15aP17564 657 aa13.11□□□□□ -0.31
Sh3kbp1-204ENSMUST00000112451 Tsen2Q6P7W5 460 aa13.11□□□□□ -0.31
Sh3kbp1-204ENSMUST00000112451 C5P06684 1680 aa13.11□□□□□ -0.31
Sh3kbp1-204ENSMUST00000112451 Med1Q925J9 1575 aa13.1□□□□□ -0.31
Sh3kbp1-204ENSMUST00000112451 Gm38655A0A286YDK6 273 aa13.1□□□□□ -0.31
Sh3kbp1-204ENSMUST00000112451 Rad17Q6NXW6 688 aa13.1□□□□□ -0.31
Sh3kbp1-204ENSMUST00000112451 4930407I10RikD3Z5T8 1512 aa13.1□□□□□ -0.31
Sh3kbp1-204ENSMUST00000112451 CemipQ8BI06 1361 aa13.09□□□□□ -0.31
Sh3kbp1-204ENSMUST00000112451 Safb2Q80YR5 991 aaKnown RBP13.09□□□□□ -0.31
Sh3kbp1-204ENSMUST00000112451 Cavin4A2AMM0 362 aa13.08□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 Unc13bQ9Z1N9 1602 aa13.07□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 Supt16hQ920B9 1047 aa13.07□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 U2af1Q9D883 239 aaKnown RBP13.07□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 Rimbp3Q3V0F0 1606 aa13.07□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 Znf521Q6KAS7 1311 aa13.06□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 Kdm2bQ6P1G2 1309 aa13.06□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 GphnQ8BUV3 769 aaKnown RBP13.06□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 Mapk8ip3Q9ESN9 1337 aa13.05□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 Scn7aB1AYL1 1681 aa13.05□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 Ccar1Q8CH18 1146 aaKnown RBP13.05□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 Abcc10Q8R4P9 1501 aa13.05□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 Trim58Q5NCC9 485 aa13.05□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 Col16a1Q8BLX7 1580 aa13.04□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 Ttc21aQ8C0S4 1314 aa13.04□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 Cdk12Q14AX6 1484 aaKnown RBP13.03□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 IghaA0A0A6YXW6 389 aa13.03□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 Fam71e1A1L3C1 212 aa13.03□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 Ccdc171E9Q1U1 1324 aa13.03□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 Asxl2Q8BZ32 1370 aa13.03□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 NudcO35685 332 aaKnown RBP13.03□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 Q3UJC8 639 aa13.02□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 Slit2Q9R1B9 1521 aa13.02□□□□□ -0.32
Sh3kbp1-204ENSMUST00000112451 Dnajc5gQ8C632 165 aa13.02□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 Liat1Q810M6 228 aa13.02□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 Topaz1E5FYH1 1653 aa13.01□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 Chd4Q6PDQ2 1915 aaKnown RBP13.01□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 Ubr1O70481 1757 aa13.01□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 Swt1Q9DBQ9 907 aa13.01□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 Neurod2Q62414 383 aa13□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 Pik3c2aQ61194 1686 aa13□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 Ptpn23Q6PB44 1692 aa13□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 Dusp27Q148W8 1138 aa13□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 Q4VA45 678 aa12.99□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 Zranb1Q7M760 708 aa12.99□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 Slc12a5Q91V14 1138 aa12.99□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 Ankrd50F7BE84 1390 aa12.99□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 HnrnpmQ9D0E1 729 aaKnown RBP12.99□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 Thsd7aQ69ZU6 1645 aa12.99□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 Sos1Q62245 1319 aa12.98□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 Hs1bp3Q3TC93 395 aa12.98□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 Smc5Q8CG46 1101 aaKnown RBP12.97□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 Iqcf3Q9D498 203 aa12.97□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 Rsph6aQ8CDR2 708 aa12.97□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 Apaf1O88879 1249 aa12.96□□□□□ -0.33
Sh3kbp1-204ENSMUST00000112451 CastP51125 788 aa12.95□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Kcnh8P59111 1102 aa12.95□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 EspnQ9ET47 871 aa12.95□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 PalmQ9Z0P4 383 aa12.95□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Map2P20357 1828 aa12.95□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Prdm10Q3UTQ7 1184 aa12.95□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Rab11fip3Q8CHD8 1047 aa12.95□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Uhrf1bp1lA2RSJ4 1457 aa12.95□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Trpm3Q5F4S9 1721 aa12.95□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Ksr2Q3UVC0 959 aa12.94□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Cavin2Q63918 418 aaKnown RBP12.94□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Col14a1Q80X19 1797 aa12.94□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Phlpp1Q8CHE4 1687 aa12.93□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Alpk3Q924C5 1678 aa12.93□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Chmp4bQ9D8B3 224 aaKnown RBP12.93□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Camta1A2A891 1682 aa12.93□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Gnai1B2RSH2 354 aa12.93□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Atxn3Q9CVD2 355 aa12.93□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Gnai3Q9DC51 354 aa12.93□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Tmc1Q8R4P5 757 aa12.92□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Ano8Q6PB70 1060 aa12.92□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Nrxn3Q6P9K9 1571 aa12.91□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 PtprvP70289 1705 aa12.91□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 C3P01027 1663 aa12.91□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Ttll13A4Q9F6 804 aa12.91□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Atl3Q91YH5 541 aa12.91□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Gas2l2Q5SSG4 860 aa12.9□□□□□ -0.34
Sh3kbp1-204ENSMUST00000112451 Tns3Q5SSZ5 1440 aa12.89□□□□□ -0.35
Sh3kbp1-204ENSMUST00000112451 Rbm25B2RY56 838 aaKnown RBP12.89□□□□□ -0.35
Sh3kbp1-204ENSMUST00000112451 Robo1O89026 1612 aa12.89□□□□□ -0.35
Sh3kbp1-204ENSMUST00000112451 Birc3O08863 600 aa12.89□□□□□ -0.35
Sh3kbp1-204ENSMUST00000112451 Ipo9Q91YE6 1041 aa12.89□□□□□ -0.35
Sh3kbp1-204ENSMUST00000112451 Wnk3Q80XP9 1757 aa12.89□□□□□ -0.35
Sh3kbp1-204ENSMUST00000112451 Egfem1Q8C088 590 aa12.88□□□□□ -0.35
Sh3kbp1-204ENSMUST00000112451 Ap3b2Q9JME5 1082 aa12.87□□□□□ -0.35
Sh3kbp1-204ENSMUST00000112451 Tet3Q8BG87 1668 aa12.87□□□□□ -0.35
Sh3kbp1-204ENSMUST00000112451 Myo5bP21271 1818 aa12.87□□□□□ -0.35
Sh3kbp1-204ENSMUST00000112451 Eif4a2P10630 407 aa12.87□□□□□ -0.35
Sh3kbp1-204ENSMUST00000112451 Stk31Q99MW1 1018 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms