RNA–Protein interactions for RNA: ENSMUST00000108419.8

Vps53-203, Transcript of Vacuolar protein sorting-associated protein 53 homolog, mousemouse

TSL 1 (best) BASIC

Gene Vps53, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53-203ENSMUST00000108419 N4bp2F8VQG7 1678 aaKnown RBP22.69■■□□□ 1.22
Vps53-203ENSMUST00000108419 IbtkQ6ZPR6 1352 aaKnown RBP22.68■■□□□ 1.22
Vps53-203ENSMUST00000108419 C5P06684 1680 aa22.68■■□□□ 1.22
Vps53-203ENSMUST00000108419 Als2Q920R0 1651 aa22.68■■□□□ 1.22
Vps53-203ENSMUST00000108419 Ofd1Q80Z25 1017 aa22.68■■□□□ 1.22
Vps53-203ENSMUST00000108419 Tcerg1Q8CGF7 1100 aaKnown RBP22.67■■□□□ 1.22
Vps53-203ENSMUST00000108419 Kiaa1107Q80TK0 1369 aa22.67■■□□□ 1.22
Vps53-203ENSMUST00000108419 Pip4k2bQ80XI4 416 aa22.66■■□□□ 1.22
Vps53-203ENSMUST00000108419 Abcc10Q8R4P9 1501 aa22.64■■□□□ 1.22
Vps53-203ENSMUST00000108419 L3mbtl2P59178 703 aa22.64■■□□□ 1.21
Vps53-203ENSMUST00000108419 NalcnQ8BXR5 1738 aa22.64■■□□□ 1.21
Vps53-203ENSMUST00000108419 Slc4a3P16283 1227 aa22.63■■□□□ 1.21
Vps53-203ENSMUST00000108419 Col14a1Q80X19 1797 aa22.63■■□□□ 1.21
Vps53-203ENSMUST00000108419 C3P01027 1663 aa22.63■■□□□ 1.21
Vps53-203ENSMUST00000108419 Iqsec2Q5DU25 1478 aa22.62■■□□□ 1.21
Vps53-203ENSMUST00000108419 Rapgef3Q8VCC8 918 aa22.61■■□□□ 1.21
Vps53-203ENSMUST00000108419 Chd4Q6PDQ2 1915 aaKnown RBP22.61■■□□□ 1.21
Vps53-203ENSMUST00000108419 GsdmaQ9EST1 446 aa22.6■■□□□ 1.21
Vps53-203ENSMUST00000108419 Rad21Q61550 635 aaKnown RBP22.59■■□□□ 1.21
Vps53-203ENSMUST00000108419 Slain2Q8CI08 581 aa22.59■■□□□ 1.21
Vps53-203ENSMUST00000108419 Ccdc9Q8VC31 543 aaKnown RBP22.59■■□□□ 1.21
Vps53-203ENSMUST00000108419 Birc3O08863 600 aa22.58■■□□□ 1.21
Vps53-203ENSMUST00000108419 Ap3b2Q9JME5 1082 aa22.58■■□□□ 1.21
Vps53-203ENSMUST00000108419 Zfp444Q3TDV8 331 aaKnown RBP22.58■■□□□ 1.2
Vps53-203ENSMUST00000108419 Znf335A2A5K6 1337 aa22.57■■□□□ 1.2
Vps53-203ENSMUST00000108419 Sipa1l2Q80TE4 1722 aa22.57■■□□□ 1.2
Vps53-203ENSMUST00000108419 CrbnQ8C7D2 445 aa22.56■■□□□ 1.2
Vps53-203ENSMUST00000108419 Ltbp4Q8K4G1 1666 aa22.56■■□□□ 1.2
Vps53-203ENSMUST00000108419 Mon2Q80TL7 1715 aa22.56■■□□□ 1.2
Vps53-203ENSMUST00000108419 Unc13bQ9Z1N9 1602 aa22.55■■□□□ 1.2
Vps53-203ENSMUST00000108419 Kcnh8P59111 1102 aa22.54■■□□□ 1.2
Vps53-203ENSMUST00000108419 Tsen2Q6P7W5 460 aa22.54■■□□□ 1.2
Vps53-203ENSMUST00000108419 Golga2Q921M4 999 aa22.54■■□□□ 1.2
Vps53-203ENSMUST00000108419 Evi5lH3BKQ3 813 aa22.53■■□□□ 1.2
Vps53-203ENSMUST00000108419 Kif1aP33173 1695 aa22.53■■□□□ 1.2
Vps53-203ENSMUST00000108419 Kank1E9Q238 1360 aa22.52■■□□□ 1.2
Vps53-203ENSMUST00000108419 Usp19Q3UJD6 1360 aa22.52■■□□□ 1.2
Vps53-203ENSMUST00000108419 U2af1Q9D883 239 aaKnown RBP22.51■■□□□ 1.19
Vps53-203ENSMUST00000108419 Trim28Q62318 834 aa22.51■■□□□ 1.19
Vps53-203ENSMUST00000108419 Slc35g1Q8BY79 368 aa22.51■■□□□ 1.19
Vps53-203ENSMUST00000108419 Astn2Q80Z10 1352 aa22.49■■□□□ 1.19
Vps53-203ENSMUST00000108419 Slc12a5Q91V14 1138 aa22.49■■□□□ 1.19
Vps53-203ENSMUST00000108419 Col18a1P39061 1774 aa22.49■■□□□ 1.19
Vps53-203ENSMUST00000108419 Pik3c2aQ61194 1686 aa22.49■■□□□ 1.19
Vps53-203ENSMUST00000108419 Tmem2Q5FWI3 1383 aa22.48■■□□□ 1.19
Vps53-203ENSMUST00000108419 Amigo3Q8C2S7 508 aa22.47■■□□□ 1.19
Vps53-203ENSMUST00000108419 Map4k4P97820 1233 aaKnown RBP22.46■■□□□ 1.19
Vps53-203ENSMUST00000108419 Uspl1Q3ULM6 1089 aa22.46■■□□□ 1.19
Vps53-203ENSMUST00000108419 Apaf1O88879 1249 aa22.46■■□□□ 1.19
Vps53-203ENSMUST00000108419 Frmpd2A0A140LI67 1392 aa22.46■■□□□ 1.19
Vps53-203ENSMUST00000108419 Erbb3Q61526 1339 aa22.45■■□□□ 1.18
Vps53-203ENSMUST00000108419 Hsp90aa1P07901 733 aaKnown RBP22.44■■□□□ 1.18
Vps53-203ENSMUST00000108419 Hoxb7P09024 217 aa22.43■■□□□ 1.18
Vps53-203ENSMUST00000108419 Speer4f1Q9D5Q6 258 aa22.43■■□□□ 1.18
Vps53-203ENSMUST00000108419 CemipQ8BI06 1361 aa22.43■■□□□ 1.18
Vps53-203ENSMUST00000108419 Cyb5rlB1AS42 316 aa22.43■■□□□ 1.18
Vps53-203ENSMUST00000108419 Col16a1Q8BLX7 1580 aa22.42■■□□□ 1.18
Vps53-203ENSMUST00000108419 Ppp1r15aP17564 657 aa22.42■■□□□ 1.18
Vps53-203ENSMUST00000108419 Dennd6aQ8BH65 605 aa22.42■■□□□ 1.18
Vps53-203ENSMUST00000108419 Nlgn1Q99K10 843 aa22.42■■□□□ 1.18
Vps53-203ENSMUST00000108419 Uhrf1bp1lA2RSJ4 1457 aa22.41■■□□□ 1.18
Vps53-203ENSMUST00000108419 Neurod2Q62414 383 aa22.41■■□□□ 1.18
Vps53-203ENSMUST00000108419 Nckap5lQ6GQX2 1323 aa22.41■■□□□ 1.18
Vps53-203ENSMUST00000108419 Cdk12Q14AX6 1484 aaKnown RBP22.41■■□□□ 1.18
Vps53-203ENSMUST00000108419 Ubr1O70481 1757 aa22.4■■□□□ 1.18
Vps53-203ENSMUST00000108419 Gm21190A0A0G2JGJ6 266 aa22.4■■□□□ 1.18
Vps53-203ENSMUST00000108419 Iqcf3Q9D498 203 aa22.4■■□□□ 1.18
Vps53-203ENSMUST00000108419 PalmQ9Z0P4 383 aa22.4■■□□□ 1.18
Vps53-203ENSMUST00000108419 Ecm2Q5FW85 670 aa22.39■■□□□ 1.18
Vps53-203ENSMUST00000108419 TnikP83510 1323 aa22.39■■□□□ 1.18
Vps53-203ENSMUST00000108419 Cabp4Q8VHC5 271 aa22.39■■□□□ 1.17
Vps53-203ENSMUST00000108419 Prkrip1Q9CWV6 186 aaKnown RBP22.38■■□□□ 1.17
Vps53-203ENSMUST00000108419 Atf3Q60765 181 aa22.37■■□□□ 1.17
Vps53-203ENSMUST00000108419 Map2P20357 1828 aa22.36■■□□□ 1.17
Vps53-203ENSMUST00000108419 Wdr17E9Q271 1322 aa22.36■■□□□ 1.17
Vps53-203ENSMUST00000108419 Camta1A2A891 1682 aa22.35■■□□□ 1.17
Vps53-203ENSMUST00000108419 Fyb1O35601 819 aa22.35■■□□□ 1.17
Vps53-203ENSMUST00000108419 GnpatP98192 678 aa22.35■■□□□ 1.17
Vps53-203ENSMUST00000108419 Rsph6aQ8CDR2 708 aa22.35■■□□□ 1.17
Vps53-203ENSMUST00000108419 Farp2Q91VS8 1065 aa22.35■■□□□ 1.17
Vps53-203ENSMUST00000108419 Gtf3c3Q3TMP1 882 aa22.34■■□□□ 1.17
Vps53-203ENSMUST00000108419 Kcna6Q61923 529 aa22.34■■□□□ 1.17
Vps53-203ENSMUST00000108419 Ccdc30Q8BVF4 654 aa22.33■■□□□ 1.17
Vps53-203ENSMUST00000108419 Ddx17Q501J6 650 aaKnown RBP22.33■■□□□ 1.16
Vps53-203ENSMUST00000108419 Atxn3Q9CVD2 355 aa22.33■■□□□ 1.16
Vps53-203ENSMUST00000108419 FancaQ9JL70 1439 aa22.32■■□□□ 1.16
Vps53-203ENSMUST00000108419 Eif4a2P10630 407 aa22.32■■□□□ 1.16
Vps53-203ENSMUST00000108419 Ralbp1Q62172 648 aa22.31■■□□□ 1.16
Vps53-203ENSMUST00000108419 TimelessQ9R1X4 1197 aa22.3■■□□□ 1.16
Vps53-203ENSMUST00000108419 Scn7aB1AYL1 1681 aa22.3■■□□□ 1.16
Vps53-203ENSMUST00000108419 Wnk3Q80XP9 1757 aa22.3■■□□□ 1.16
Vps53-203ENSMUST00000108419 Irx3P81067 507 aa22.3■■□□□ 1.16
Vps53-203ENSMUST00000108419 Q4VA45 678 aa22.3■■□□□ 1.16
Vps53-203ENSMUST00000108419 Mdc1Q5PSV9 1707 aa22.3■■□□□ 1.16
Vps53-203ENSMUST00000108419 Mapk8ip3Q9ESN9 1337 aa22.29■■□□□ 1.16
Vps53-203ENSMUST00000108419 Gli3Q61602 1583 aa22.29■■□□□ 1.16
Vps53-203ENSMUST00000108419 Dusp27Q148W8 1138 aa22.29■■□□□ 1.16
Vps53-203ENSMUST00000108419 Fchsd2Q3USJ8 740 aa22.28■■□□□ 1.16
Vps53-203ENSMUST00000108419 Ncapd2Q8K2Z4 1392 aa22.27■■□□□ 1.16
Vps53-203ENSMUST00000108419 Mcm10Q0VBD2 885 aa22.27■■□□□ 1.16
Retrieved 100 of 22,080 RNA–protein pairs in 185 ms