RNA–Protein interactions for RNA: ENSMUST00000106118.9

Ebf3-202, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 3,736 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-202ENSMUST00000106118 Lmtk3Q5XJV6 1424 aa14.49□□□□□ -0.09
Ebf3-202ENSMUST00000106118 Dip2bQ3UH60 1574 aa14.49□□□□□ -0.09
Ebf3-202ENSMUST00000106118 Hoxb7P09024 217 aa14.49□□□□□ -0.09
Ebf3-202ENSMUST00000106118 Zfp777B9EKF4 885 aa14.48□□□□□ -0.09
Ebf3-202ENSMUST00000106118 Fchsd2Q3USJ8 740 aa14.48□□□□□ -0.09
Ebf3-202ENSMUST00000106118 Prkrip1Q9CWV6 186 aaKnown RBP14.48□□□□□ -0.09
Ebf3-202ENSMUST00000106118 P2rx7Q9Z1M0 595 aa14.48□□□□□ -0.09
Ebf3-202ENSMUST00000106118 Irx3P81067 507 aa14.47□□□□□ -0.09
Ebf3-202ENSMUST00000106118 Ppp1r15aP17564 657 aa14.46□□□□□ -0.09
Ebf3-202ENSMUST00000106118 Rreb1Q3UH06 1700 aaKnown RBP14.46□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Znf335A2A5K6 1337 aa14.46□□□□□ -0.1
Ebf3-202ENSMUST00000106118 IghaA0A0A6YXW6 389 aa14.45□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Arap3Q8R5G7 1538 aa14.45□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Cavin4A2AMM0 362 aa14.45□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Apaf1O88879 1249 aa14.45□□□□□ -0.1
Ebf3-202ENSMUST00000106118 CanxP35564 591 aaKnown RBP14.44□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Trim28Q62318 834 aa14.44□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Tcerg1Q8CGF7 1100 aaKnown RBP14.44□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Tnrc6bQ8BKI2 1810 aaKnown RBP14.44□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Usp32F8VPZ3 1604 aa14.44□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Astn2Q80Z10 1352 aa14.43□□□□□ -0.1
Ebf3-202ENSMUST00000106118 4930407I10RikD3Z5T8 1512 aa14.43□□□□□ -0.1
Ebf3-202ENSMUST00000106118 MlecQ6ZQI3 291 aaKnown RBP14.43□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Ccar1Q8CH18 1146 aaKnown RBP14.43□□□□□ -0.1
Ebf3-202ENSMUST00000106118 NgefQ8CHT1 710 aa14.43□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Ap3b2Q9JME5 1082 aa14.43□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Iqsec2Q5DU25 1478 aa14.43□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Pcdh10E9PXQ7 1057 aa14.42□□□□□ -0.1
Ebf3-202ENSMUST00000106118 NudcO35685 332 aaKnown RBP14.42□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Dnajc5P60904 198 aa14.42□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Slc12a5Q91V14 1138 aa14.42□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Iqcf3Q9D498 203 aa14.42□□□□□ -0.1
Ebf3-202ENSMUST00000106118 PaskQ8CEE6 1383 aa14.42□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Dusp27Q148W8 1138 aa14.41□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Polr3glQ8R0C0 218 aa14.41□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Ksr2Q3UVC0 959 aa14.41□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Apbb1Q9QXJ1 710 aa14.41□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Rims2Q9EQZ7 1530 aa14.41□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Kif1aP33173 1695 aa14.41□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Spryd3E9Q9B3 442 aa14.4□□□□□ -0.1
Ebf3-202ENSMUST00000106118 AampJ3QN89 436 aa14.4□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Pik3c2bE9QAN8 1632 aa14.4□□□□□ -0.1
Ebf3-202ENSMUST00000106118 TnikP83510 1323 aa14.4□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Znf541Q0GGX2 1363 aa14.4□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Plcd4Q8K3R3 807 aa14.4□□□□□ -0.1
Ebf3-202ENSMUST00000106118 Swt1Q9DBQ9 907 aa14.39□□□□□ -0.11
Ebf3-202ENSMUST00000106118 PalmQ9Z0P4 383 aa14.39□□□□□ -0.11
Ebf3-202ENSMUST00000106118 Ythdc1E9Q5K9 736 aaKnown RBP14.39□□□□□ -0.11
Ebf3-202ENSMUST00000106118 Sox12Q04890 314 aa14.38□□□□□ -0.11
Ebf3-202ENSMUST00000106118 Pak3Q61036 559 aa14.38□□□□□ -0.11
Ebf3-202ENSMUST00000106118 Taok2Q6ZQ29 1240 aa14.38□□□□□ -0.11
Ebf3-202ENSMUST00000106118 Gm10563F6WIE4 79 aa14.38□□□□□ -0.11
Ebf3-202ENSMUST00000106118 Rangap1P46061 589 aaKnown RBP14.37□□□□□ -0.11
Ebf3-202ENSMUST00000106118 Gtf3c3Q3TMP1 882 aa14.37□□□□□ -0.11
Ebf3-202ENSMUST00000106118 Trim58Q5NCC9 485 aa14.37□□□□□ -0.11
Ebf3-202ENSMUST00000106118 Dbr1Q923B1 550 aa14.37□□□□□ -0.11
Ebf3-202ENSMUST00000106118 Atxn3Q9CVD2 355 aa14.37□□□□□ -0.11
Ebf3-202ENSMUST00000106118 Kcnh8P59111 1102 aa14.36□□□□□ -0.11
Ebf3-202ENSMUST00000106118 B4galnt3Q6L8S8 986 aa14.36□□□□□ -0.11
Ebf3-202ENSMUST00000106118 ChgaP26339 463 aaKnown RBP14.35□□□□□ -0.11
Ebf3-202ENSMUST00000106118 Scaf1Q5U4C3 1256 aaKnown RBP14.35□□□□□ -0.11
Ebf3-202ENSMUST00000106118 Kif20bQ80WE4 1774 aaKnown RBP14.34□□□□□ -0.11
Ebf3-202ENSMUST00000106118 Uhrf1bp1B2KF50 1429 aa14.34□□□□□ -0.11
Ebf3-202ENSMUST00000106118 Vsig10D3YX43 558 aa14.34□□□□□ -0.11
Ebf3-202ENSMUST00000106118 Rsph6aQ8CDR2 708 aa14.34□□□□□ -0.11
Ebf3-202ENSMUST00000106118 Stk31Q99MW1 1018 aa14.33□□□□□ -0.11
Ebf3-202ENSMUST00000106118 Trim26Q99PN3 545 aa14.33□□□□□ -0.11
Ebf3-202ENSMUST00000106118 Tmem94Q7TSH8 1360 aa14.33□□□□□ -0.12
Ebf3-202ENSMUST00000106118 CemipQ8BI06 1361 aa14.33□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Ccdc171E9Q1U1 1324 aa14.33□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Abcc10Q8R4P9 1501 aa14.33□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Dennd6aQ8BH65 605 aa14.32□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Fam135bQ9DAI6 1403 aa14.32□□□□□ -0.12
Ebf3-202ENSMUST00000106118 N4bp2F8VQG7 1678 aaKnown RBP14.32□□□□□ -0.12
Ebf3-202ENSMUST00000106118 D430041D05RikF6ZGR6 1678 aa14.32□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Idi1P58044 227 aa14.31□□□□□ -0.12
Ebf3-202ENSMUST00000106118 4930567H17RikQ3V0K5 233 aa14.31□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Uhrf1bp1lA2RSJ4 1457 aa14.31□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Gnai1B2RSH2 354 aa14.31□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Rbm25B2RY56 838 aaKnown RBP14.31□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Rad17Q6NXW6 688 aa14.31□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Cabp4Q8VHC5 271 aa14.31□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Gnai3Q9DC51 354 aa14.31□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Chd4Q6PDQ2 1915 aaKnown RBP14.31□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Cdk12Q14AX6 1484 aaKnown RBP14.3□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Gm21190A0A0G2JGJ6 266 aa14.3□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Topaz1E5FYH1 1653 aa14.3□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Ttc21aQ8C0S4 1314 aa14.3□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Gas2l2Q5SSG4 860 aa14.3□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Frmpd2A0A140LI67 1392 aa14.3□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Q4VA45 678 aa14.29□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Ankrd50F7BE84 1390 aa14.29□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Zmym3Q9JLM4 1370 aa14.29□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Rab11fip3Q8CHD8 1047 aa14.28□□□□□ -0.12
Ebf3-202ENSMUST00000106118 C5P06684 1680 aa14.28□□□□□ -0.12
Ebf3-202ENSMUST00000106118 CastP51125 788 aa14.28□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Pank1Q8K4K6 548 aa14.28□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Atp7bQ64446 1462 aa14.28□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Tns3Q5SSZ5 1440 aa14.27□□□□□ -0.12
Ebf3-202ENSMUST00000106118 Mon2Q80TL7 1715 aa14.27□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms