RNA–Protein interactions for RNA: ENSMUST00000106118.9

Ebf3-202, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 3,736 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-202ENSMUST00000106118 NischQ80TM9 1593 aa22.37■■□□□ 1.17
Ebf3-202ENSMUST00000106118 Gm35339A0A140LHH9 1649 aa22.12■■□□□ 1.13
Ebf3-202ENSMUST00000106118 Abcc9P70170 1546 aa21.69■■□□□ 1.06
Ebf3-202ENSMUST00000106118 Abcc8B2RUS7 1588 aa21.31■■□□□ 1
Ebf3-202ENSMUST00000106118 Rhox8Q6VSS7 320 aa20.5■□□□□ 0.87
Ebf3-202ENSMUST00000106118 ScribQ80U72 1612 aa19.94■□□□□ 0.78
Ebf3-202ENSMUST00000106118 Rtl1Q7M732 1744 aa19.93■□□□□ 0.78
Ebf3-202ENSMUST00000106118 Dcaf1Q80TR8 1506 aa19.93■□□□□ 0.78
Ebf3-202ENSMUST00000106118 Rb1cc1Q9ESK9 1588 aa19.58■□□□□ 0.73
Ebf3-202ENSMUST00000106118 NacadQ5SWP3 1504 aa19.58■□□□□ 0.72
Ebf3-202ENSMUST00000106118 Kdm5dQ62240 1548 aa19.58■□□□□ 0.72
Ebf3-202ENSMUST00000106118 Ccdc180J3QNE4 1664 aa19.45■□□□□ 0.7
Ebf3-202ENSMUST00000106118 Baz1aO88379 1555 aa19.37■□□□□ 0.69
Ebf3-202ENSMUST00000106118 Crybg2B7ZCC2 1516 aa19.15■□□□□ 0.66
Ebf3-202ENSMUST00000106118 Sycp2Q9CUU3 1500 aa19.1■□□□□ 0.65
Ebf3-202ENSMUST00000106118 Zcchc6Q5BLK4 1491 aaKnown RBP19.07■□□□□ 0.64
Ebf3-202ENSMUST00000106118 Ccdc136Q3TVA9 1136 aa18.95■□□□□ 0.62
Ebf3-202ENSMUST00000106118 Smarca2Q6DIC0 1577 aa18.85■□□□□ 0.61
Ebf3-202ENSMUST00000106118 Trim41Q5NCC3 630 aa18.77■□□□□ 0.6
Ebf3-202ENSMUST00000106118 HrcG5E8J6 738 aa18.62■□□□□ 0.57
Ebf3-202ENSMUST00000106118 BicraF8VPZ9 1578 aa18.61■□□□□ 0.57
Ebf3-202ENSMUST00000106118 Brd4Q9ESU6 1400 aaKnown RBP18.53■□□□□ 0.56
Ebf3-202ENSMUST00000106118 Cecr2E9Q2Z1 1453 aa18.41■□□□□ 0.54
Ebf3-202ENSMUST00000106118 Smarca4Q3TKT4 1613 aaKnown RBP18.24■□□□□ 0.51
Ebf3-202ENSMUST00000106118 Cngb1E1AZ71 1325 aa18.24■□□□□ 0.51
Ebf3-202ENSMUST00000106118 Synj1Q8CHC4 1574 aa18.24■□□□□ 0.51
Ebf3-202ENSMUST00000106118 Esf1Q3V1V3 845 aaKnown RBP18.22■□□□□ 0.51
Ebf3-202ENSMUST00000106118 CftrP26361 1476 aa18.21■□□□□ 0.51
Ebf3-202ENSMUST00000106118 Ehmt2Q9Z148 1263 aaKnown RBP18.19■□□□□ 0.5
Ebf3-202ENSMUST00000106118 Cttnbp2B9EJA2 1648 aa18.17■□□□□ 0.5
Ebf3-202ENSMUST00000106118 Golga3P55937 1487 aa18.16■□□□□ 0.5
Ebf3-202ENSMUST00000106118 Cep164Q5DU05 1446 aa18.13■□□□□ 0.49
Ebf3-202ENSMUST00000106118 Pds5bQ4VA53 1446 aaKnown RBP18.1■□□□□ 0.49
Ebf3-202ENSMUST00000106118 Atad2bE9Q166 1460 aaKnown RBP18.07■□□□□ 0.48
Ebf3-202ENSMUST00000106118 Iqgap2Q3UQ44 1575 aa18.01■□□□□ 0.47
Ebf3-202ENSMUST00000106118 Rsf1E9PWW9 1441 aaKnown RBP17.92■□□□□ 0.46
Ebf3-202ENSMUST00000106118 Top2bQ64511 1612 aa17.9■□□□□ 0.46
Ebf3-202ENSMUST00000106118 Chic1Q8CBW7 227 aa17.88■□□□□ 0.45
Ebf3-202ENSMUST00000106118 Ccdc88bQ4QRL3 1481 aa17.84■□□□□ 0.45
Ebf3-202ENSMUST00000106118 Ercc6F8VPZ5 1481 aa17.78■□□□□ 0.44
Ebf3-202ENSMUST00000106118 Fmn1Q05860 1466 aa17.77■□□□□ 0.44
Ebf3-202ENSMUST00000106118 Gab3Q8BSM5 595 aa17.77■□□□□ 0.43
Ebf3-202ENSMUST00000106118 Rpgrip1Q9EPQ2 1331 aa17.76■□□□□ 0.43
Ebf3-202ENSMUST00000106118 Cc2d2aQ8CFW7 1633 aa17.7■□□□□ 0.42
Ebf3-202ENSMUST00000106118 Wdr62Q3U3T8 1523 aa17.69■□□□□ 0.42
Ebf3-202ENSMUST00000106118 Frmpd1A2AKB4 1549 aa17.67■□□□□ 0.42
Ebf3-202ENSMUST00000106118 Top2aQ01320 1528 aaKnown RBP17.55■□□□□ 0.4
Ebf3-202ENSMUST00000106118 Acin1Q9JIX8 1338 aaKnown RBP17.53■□□□□ 0.4
Ebf3-202ENSMUST00000106118 TnnQ80Z71 1560 aa17.48■□□□□ 0.39
Ebf3-202ENSMUST00000106118 Kif15Q6P9L6 1387 aa17.47■□□□□ 0.39
Ebf3-202ENSMUST00000106118 Phldb1Q6PDH0 1371 aaKnown RBP17.47■□□□□ 0.39
Ebf3-202ENSMUST00000106118 Lamc3Q9R0B6 1581 aa17.45■□□□□ 0.38
Ebf3-202ENSMUST00000106118 Thoc2B1AZI6 1594 aaKnown RBP17.44■□□□□ 0.38
Ebf3-202ENSMUST00000106118 Npm2Q80W85 207 aa17.44■□□□□ 0.38
Ebf3-202ENSMUST00000106118 Rapgef2Q8CHG7 1496 aa17.42■□□□□ 0.38
Ebf3-202ENSMUST00000106118 Unc13aQ4KUS2 1712 aa17.36■□□□□ 0.37
Ebf3-202ENSMUST00000106118 Ccdc18Q640L5 1455 aa17.35■□□□□ 0.37
Ebf3-202ENSMUST00000106118 Ubl4bQ9CQ84 188 aa17.34■□□□□ 0.37
Ebf3-202ENSMUST00000106118 Il27Q8K3I6 234 aa17.34■□□□□ 0.37
Ebf3-202ENSMUST00000106118 Cep162Q6ZQ06 1403 aa17.31■□□□□ 0.36
Ebf3-202ENSMUST00000106118 Myt1lP97500 1187 aa17.28■□□□□ 0.36
Ebf3-202ENSMUST00000106118 Fam135aQ6NS59 1506 aa17.28■□□□□ 0.36
Ebf3-202ENSMUST00000106118 Camsap1A2AHC3 1581 aa17.25■□□□□ 0.35
Ebf3-202ENSMUST00000106118 Npm1Q61937 292 aaKnown RBP17.25■□□□□ 0.35
Ebf3-202ENSMUST00000106118 Cux2P70298 1426 aa17.22■□□□□ 0.35
Ebf3-202ENSMUST00000106118 NrkQ9R0G8 1455 aa17.19■□□□□ 0.34
Ebf3-202ENSMUST00000106118 Baz1bQ9Z277 1479 aa17.18■□□□□ 0.34
Ebf3-202ENSMUST00000106118 Shroom4Q1W617 1475 aa17.15■□□□□ 0.34
Ebf3-202ENSMUST00000106118 Zeb1Q64318 1117 aa17.14■□□□□ 0.34
Ebf3-202ENSMUST00000106118 Grin2bQ01097 1482 aa17.13■□□□□ 0.33
Ebf3-202ENSMUST00000106118 Pcgf6Q99NA9 353 aa17.09■□□□□ 0.33
Ebf3-202ENSMUST00000106118 Eif4g1Q6NZJ6 1600 aaKnown RBP17.09■□□□□ 0.33
Ebf3-202ENSMUST00000106118 PtprkP35822 1457 aa17.08■□□□□ 0.32
Ebf3-202ENSMUST00000106118 Arhgap35Q91YM2 1499 aa17.07■□□□□ 0.32
Ebf3-202ENSMUST00000106118 LrpprcQ6PB66 1392 aaKnown RBP17.06■□□□□ 0.32
Ebf3-202ENSMUST00000106118 Clip1Q922J3 1391 aa17.06■□□□□ 0.32
Ebf3-202ENSMUST00000106118 Map3k1P53349 1493 aa17.05■□□□□ 0.32
Ebf3-202ENSMUST00000106118 Efcab5A0JP43 1406 aa17.02■□□□□ 0.32
Ebf3-202ENSMUST00000106118 PogzQ8BZH4 1409 aaKnown RBP16.99■□□□□ 0.31
Ebf3-202ENSMUST00000106118 Eea1Q8BL66 1411 aa16.98■□□□□ 0.31
Ebf3-202ENSMUST00000106118 Mrc2Q64449 1479 aa16.97■□□□□ 0.31
Ebf3-202ENSMUST00000106118 Mroh2bQ7M6Y6 1581 aa16.96■□□□□ 0.31
Ebf3-202ENSMUST00000106118 UbtfP25976 765 aaKnown RBP16.95■□□□□ 0.3
Ebf3-202ENSMUST00000106118 Duox2A2AQ99 1517 aa16.94■□□□□ 0.3
Ebf3-202ENSMUST00000106118 NefmP08553 848 aa16.93■□□□□ 0.3
Ebf3-202ENSMUST00000106118 Dhx29Q6PGC1 1365 aaKnown RBP16.93■□□□□ 0.3
Ebf3-202ENSMUST00000106118 Mier1Q5UAK0 511 aa16.91■□□□□ 0.3
Ebf3-202ENSMUST00000106118 AqrQ8CFQ3 1481 aaKnown RBP16.91■□□□□ 0.3
Ebf3-202ENSMUST00000106118 Setd5Q5XJV7 1441 aa16.91■□□□□ 0.3
Ebf3-202ENSMUST00000106118 Las1lA2BE28 776 aaKnown RBP16.88■□□□□ 0.29
Ebf3-202ENSMUST00000106118 Carmil1Q6EDY6 1374 aa16.87■□□□□ 0.29
Ebf3-202ENSMUST00000106118 Plekhg3Q4VAC9 1341 aa16.83■□□□□ 0.28
Ebf3-202ENSMUST00000106118 Dnajc5bQ9CQ94 199 aa16.82■□□□□ 0.28
Ebf3-202ENSMUST00000106118 Crocc2F6XLV1 1638 aa16.82■□□□□ 0.28
Ebf3-202ENSMUST00000106118 Ap3b1Q9Z1T1 1105 aa16.79■□□□□ 0.28
Ebf3-202ENSMUST00000106118 SynmQ70IV5 1561 aa16.78■□□□□ 0.28
Ebf3-202ENSMUST00000106118 Kif21aQ9QXL2 1672 aa16.78■□□□□ 0.28
Ebf3-202ENSMUST00000106118 Wdr66E9Q743 1299 aa16.78■□□□□ 0.28
Ebf3-202ENSMUST00000106118 Arap1Q4LDD4 1452 aa16.77■□□□□ 0.28
Ebf3-202ENSMUST00000106118 Arhgef5E9Q7D5 1581 aa16.76■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms