RNA–Protein interactions for RNA: ENSMUST00000034053.6

Pdlim3-201, Transcript of PDZ and LIM domain protein 3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pdlim3, Length 1,604 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3-201ENSMUST00000034053 Scn7aB1AYL1 1681 aa18.75■□□□□ 0.59
Pdlim3-201ENSMUST00000034053 Idi1P58044 227 aa18.75■□□□□ 0.59
Pdlim3-201ENSMUST00000034053 Col16a1Q8BLX7 1580 aa18.73■□□□□ 0.59
Pdlim3-201ENSMUST00000034053 Znf335A2A5K6 1337 aa18.72■□□□□ 0.59
Pdlim3-201ENSMUST00000034053 GsdmaQ9EST1 446 aa18.72■□□□□ 0.59
Pdlim3-201ENSMUST00000034053 Wnk3Q80XP9 1757 aa18.71■□□□□ 0.59
Pdlim3-201ENSMUST00000034053 Astn2Q80Z10 1352 aa18.7■□□□□ 0.58
Pdlim3-201ENSMUST00000034053 Eif5bQ05D44 1216 aaKnown RBP18.7■□□□□ 0.58
Pdlim3-201ENSMUST00000034053 Trim28Q62318 834 aa18.68■□□□□ 0.58
Pdlim3-201ENSMUST00000034053 CrbnQ8C7D2 445 aa18.68■□□□□ 0.58
Pdlim3-201ENSMUST00000034053 Slain2Q8CI08 581 aa18.68■□□□□ 0.58
Pdlim3-201ENSMUST00000034053 Sox12Q04890 314 aa18.67■□□□□ 0.58
Pdlim3-201ENSMUST00000034053 Rad21Q61550 635 aaKnown RBP18.67■□□□□ 0.58
Pdlim3-201ENSMUST00000034053 NgefQ8CHT1 710 aa18.67■□□□□ 0.58
Pdlim3-201ENSMUST00000034053 Golga2Q921M4 999 aa18.67■□□□□ 0.58
Pdlim3-201ENSMUST00000034053 Map4k4P97820 1233 aaKnown RBP18.67■□□□□ 0.58
Pdlim3-201ENSMUST00000034053 Camta1A2A891 1682 aa18.66■□□□□ 0.58
Pdlim3-201ENSMUST00000034053 Uspl1Q3ULM6 1089 aa18.66■□□□□ 0.58
Pdlim3-201ENSMUST00000034053 Spef2Q8C9J3 1734 aa18.66■□□□□ 0.58
Pdlim3-201ENSMUST00000034053 Cdk12Q14AX6 1484 aaKnown RBP18.65■□□□□ 0.58
Pdlim3-201ENSMUST00000034053 Evi5lH3BKQ3 813 aa18.65■□□□□ 0.58
Pdlim3-201ENSMUST00000034053 L3mbtl2P59178 703 aa18.65■□□□□ 0.58
Pdlim3-201ENSMUST00000034053 Tsen2Q6P7W5 460 aa18.64■□□□□ 0.57
Pdlim3-201ENSMUST00000034053 Kank1E9Q238 1360 aa18.64■□□□□ 0.57
Pdlim3-201ENSMUST00000034053 Tmem2Q5FWI3 1383 aa18.64■□□□□ 0.57
Pdlim3-201ENSMUST00000034053 CemipQ8BI06 1361 aa18.64■□□□□ 0.57
Pdlim3-201ENSMUST00000034053 PtprvP70289 1705 aa18.64■□□□□ 0.57
Pdlim3-201ENSMUST00000034053 Birc3O08863 600 aa18.63■□□□□ 0.57
Pdlim3-201ENSMUST00000034053 Hoxb7P09024 217 aa18.63■□□□□ 0.57
Pdlim3-201ENSMUST00000034053 Uhrf1bp1lA2RSJ4 1457 aa18.63■□□□□ 0.57
Pdlim3-201ENSMUST00000034053 Ap3b2Q9JME5 1082 aa18.63■□□□□ 0.57
Pdlim3-201ENSMUST00000034053 U2af1Q9D883 239 aaKnown RBP18.62■□□□□ 0.57
Pdlim3-201ENSMUST00000034053 Erbb3Q61526 1339 aa18.62■□□□□ 0.57
Pdlim3-201ENSMUST00000034053 Csrnp3P59055 597 aa18.61■□□□□ 0.57
Pdlim3-201ENSMUST00000034053 Amigo3Q8C2S7 508 aa18.61■□□□□ 0.57
Pdlim3-201ENSMUST00000034053 Fam135bQ9DAI6 1403 aa18.6■□□□□ 0.57
Pdlim3-201ENSMUST00000034053 Frmpd2A0A140LI67 1392 aa18.6■□□□□ 0.57
Pdlim3-201ENSMUST00000034053 Znf541Q0GGX2 1363 aa18.6■□□□□ 0.57
Pdlim3-201ENSMUST00000034053 Slc12a5Q91V14 1138 aa18.6■□□□□ 0.57
Pdlim3-201ENSMUST00000034053 Ppp1r15aP17564 657 aa18.6■□□□□ 0.57
Pdlim3-201ENSMUST00000034053 Speer4f1Q9D5Q6 258 aa18.6■□□□□ 0.57
Pdlim3-201ENSMUST00000034053 Parp14Q2EMV9 1817 aa18.59■□□□□ 0.57
Pdlim3-201ENSMUST00000034053 Tcerg1Q8CGF7 1100 aaKnown RBP18.59■□□□□ 0.57
Pdlim3-201ENSMUST00000034053 Robo1O89026 1612 aa18.57■□□□□ 0.56
Pdlim3-201ENSMUST00000034053 Ttc41Q692V3 1318 aa18.56■□□□□ 0.56
Pdlim3-201ENSMUST00000034053 Slc35g1Q8BY79 368 aa18.56■□□□□ 0.56
Pdlim3-201ENSMUST00000034053 Siglec1Q62230 1695 aa18.55■□□□□ 0.56
Pdlim3-201ENSMUST00000034053 Apaf1O88879 1249 aa18.55■□□□□ 0.56
Pdlim3-201ENSMUST00000034053 FancaQ9JL70 1439 aa18.55■□□□□ 0.56
Pdlim3-201ENSMUST00000034053 Atf3Q60765 181 aa18.54■□□□□ 0.56
Pdlim3-201ENSMUST00000034053 Ralbp1Q62172 648 aa18.54■□□□□ 0.56
Pdlim3-201ENSMUST00000034053 Dennd6aQ8BH65 605 aa18.54■□□□□ 0.56
Pdlim3-201ENSMUST00000034053 Ccdc30Q8BVF4 654 aa18.54■□□□□ 0.56
Pdlim3-201ENSMUST00000034053 PalmQ9Z0P4 383 aa18.54■□□□□ 0.56
Pdlim3-201ENSMUST00000034053 Rsph6aQ8CDR2 708 aa18.53■□□□□ 0.56
Pdlim3-201ENSMUST00000034053 Nlgn1Q99K10 843 aa18.53■□□□□ 0.56
Pdlim3-201ENSMUST00000034053 Calr4Q3TQS0 420 aa18.52■□□□□ 0.56
Pdlim3-201ENSMUST00000034053 Brinp3Q499E0 766 aa18.52■□□□□ 0.56
Pdlim3-201ENSMUST00000034053 Neurod2Q62414 383 aa18.52■□□□□ 0.56
Pdlim3-201ENSMUST00000034053 Ncbp3Q8BZR9 615 aaKnown RBP18.52■□□□□ 0.55
Pdlim3-201ENSMUST00000034053 Uhrf1bp1B2KF50 1429 aa18.51■□□□□ 0.55
Pdlim3-201ENSMUST00000034053 Nfat5Q9WV30 1534 aa18.51■□□□□ 0.55
Pdlim3-201ENSMUST00000034053 Wdr17E9Q271 1322 aa18.51■□□□□ 0.55
Pdlim3-201ENSMUST00000034053 Fchsd2Q3USJ8 740 aa18.5■□□□□ 0.55
Pdlim3-201ENSMUST00000034053 Kcna6Q61923 529 aa18.5■□□□□ 0.55
Pdlim3-201ENSMUST00000034053 Nckap5lQ6GQX2 1323 aa18.5■□□□□ 0.55
Pdlim3-201ENSMUST00000034053 Plekhh1Q80TI1 1356 aa18.49■□□□□ 0.55
Pdlim3-201ENSMUST00000034053 Gm21190A0A0G2JGJ6 266 aa18.49■□□□□ 0.55
Pdlim3-201ENSMUST00000034053 Q4VA45 678 aa18.49■□□□□ 0.55
Pdlim3-201ENSMUST00000034053 Ptpn23Q6PB44 1692 aa18.48■□□□□ 0.55
Pdlim3-201ENSMUST00000034053 Tet3Q8BG87 1668 aa18.48■□□□□ 0.55
Pdlim3-201ENSMUST00000034053 Eif4a2P10630 407 aa18.48■□□□□ 0.55
Pdlim3-201ENSMUST00000034053 Upf2A2AT37 1269 aaKnown RBP18.47■□□□□ 0.55
Pdlim3-201ENSMUST00000034053 Farp2Q91VS8 1065 aa18.47■□□□□ 0.55
Pdlim3-201ENSMUST00000034053 Mapk8ip3Q9ESN9 1337 aa18.47■□□□□ 0.55
Pdlim3-201ENSMUST00000034053 Ncapd2Q8K2Z4 1392 aa18.47■□□□□ 0.55
Pdlim3-201ENSMUST00000034053 Gas2l2Q5SSG4 860 aa18.46■□□□□ 0.55
Pdlim3-201ENSMUST00000034053 Atxn3Q9CVD2 355 aa18.46■□□□□ 0.55
Pdlim3-201ENSMUST00000034053 DccP70211 1447 aa18.46■□□□□ 0.55
Pdlim3-201ENSMUST00000034053 Atp7bQ64446 1462 aa18.45■□□□□ 0.54
Pdlim3-201ENSMUST00000034053 Dusp27Q148W8 1138 aa18.45■□□□□ 0.54
Pdlim3-201ENSMUST00000034053 Slit2Q9R1B9 1521 aa18.45■□□□□ 0.54
Pdlim3-201ENSMUST00000034053 Cavin4A2AMM0 362 aa18.45■□□□□ 0.54
Pdlim3-201ENSMUST00000034053 Cabp4Q8VHC5 271 aa18.45■□□□□ 0.54
Pdlim3-201ENSMUST00000034053 Fyb1O35601 819 aa18.44■□□□□ 0.54
Pdlim3-201ENSMUST00000034053 PaskQ8CEE6 1383 aa18.44■□□□□ 0.54
Pdlim3-201ENSMUST00000034053 GnpatP98192 678 aa18.43■□□□□ 0.54
Pdlim3-201ENSMUST00000034053 Scaf1Q5U4C3 1256 aaKnown RBP18.43■□□□□ 0.54
Pdlim3-201ENSMUST00000034053 Ncoa4Q5U4H9 625 aa18.43■□□□□ 0.54
Pdlim3-201ENSMUST00000034053 Ano8Q6PB70 1060 aa18.43■□□□□ 0.54
Pdlim3-201ENSMUST00000034053 TimelessQ9R1X4 1197 aa18.43■□□□□ 0.54
Pdlim3-201ENSMUST00000034053 Abca15E9PWH4 1668 aa18.43■□□□□ 0.54
Pdlim3-201ENSMUST00000034053 SafbD3YXK2 937 aaKnown RBP18.42■□□□□ 0.54
Pdlim3-201ENSMUST00000034053 Ciz1Q8VEH2 845 aa18.41■□□□□ 0.54
Pdlim3-201ENSMUST00000034053 Mcm10Q0VBD2 885 aa18.41■□□□□ 0.54
Pdlim3-201ENSMUST00000034053 Rad17Q6NXW6 688 aa18.4■□□□□ 0.54
Pdlim3-201ENSMUST00000034053 MpripP97434 1024 aa18.39■□□□□ 0.53
Pdlim3-201ENSMUST00000034053 Trpm3Q5F4S9 1721 aa18.39■□□□□ 0.53
Pdlim3-201ENSMUST00000034053 Arfgef2A2A5R2 1792 aa18.38■□□□□ 0.53
Pdlim3-201ENSMUST00000034053 Hoxc9P09633 260 aa18.38■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms