RNA–Protein interactions for RNA: ENSMUST00000034053.6

Pdlim3-201, Transcript of PDZ and LIM domain protein 3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pdlim3, Length 1,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3-201ENSMUST00000034053 Gm35339A0A140LHH9 1649 aa29.79■■■□□ 2.36
Pdlim3-201ENSMUST00000034053 NischQ80TM9 1593 aa29.68■■■□□ 2.34
Pdlim3-201ENSMUST00000034053 Abcc9P70170 1546 aa28.86■■■□□ 2.21
Pdlim3-201ENSMUST00000034053 Abcc8B2RUS7 1588 aa28.44■■■□□ 2.14
Pdlim3-201ENSMUST00000034053 ScribQ80U72 1612 aa27.04■■□□□ 1.92
Pdlim3-201ENSMUST00000034053 Dcaf1Q80TR8 1506 aa26.42■■□□□ 1.82
Pdlim3-201ENSMUST00000034053 Rhox8Q6VSS7 320 aa26.39■■□□□ 1.81
Pdlim3-201ENSMUST00000034053 Kdm5dQ62240 1548 aa26.26■■□□□ 1.79
Pdlim3-201ENSMUST00000034053 NacadQ5SWP3 1504 aa26.19■■□□□ 1.78
Pdlim3-201ENSMUST00000034053 Rb1cc1Q9ESK9 1588 aa25.98■■□□□ 1.75
Pdlim3-201ENSMUST00000034053 Ccdc180J3QNE4 1664 aa25.85■■□□□ 1.73
Pdlim3-201ENSMUST00000034053 Rtl1Q7M732 1744 aa25.76■■□□□ 1.71
Pdlim3-201ENSMUST00000034053 Baz1aO88379 1555 aa25.66■■□□□ 1.7
Pdlim3-201ENSMUST00000034053 Sycp2Q9CUU3 1500 aa25.66■■□□□ 1.7
Pdlim3-201ENSMUST00000034053 Crybg2B7ZCC2 1516 aa25.33■■□□□ 1.65
Pdlim3-201ENSMUST00000034053 BicraF8VPZ9 1578 aa25.24■■□□□ 1.63
Pdlim3-201ENSMUST00000034053 Zcchc6Q5BLK4 1491 aaKnown RBP25.05■■□□□ 1.6
Pdlim3-201ENSMUST00000034053 Smarca2Q6DIC0 1577 aa25.04■■□□□ 1.6
Pdlim3-201ENSMUST00000034053 Ccdc136Q3TVA9 1136 aa24.57■■□□□ 1.52
Pdlim3-201ENSMUST00000034053 Cecr2E9Q2Z1 1453 aa24.54■■□□□ 1.52
Pdlim3-201ENSMUST00000034053 Smarca4Q3TKT4 1613 aaKnown RBP24.34■■□□□ 1.49
Pdlim3-201ENSMUST00000034053 Pds5bQ4VA53 1446 aaKnown RBP24.33■■□□□ 1.49
Pdlim3-201ENSMUST00000034053 Brd4Q9ESU6 1400 aaKnown RBP24.24■■□□□ 1.47
Pdlim3-201ENSMUST00000034053 Atad2bE9Q166 1460 aaKnown RBP24.24■■□□□ 1.47
Pdlim3-201ENSMUST00000034053 Synj1Q8CHC4 1574 aa24.24■■□□□ 1.47
Pdlim3-201ENSMUST00000034053 Trim41Q5NCC3 630 aa24.17■■□□□ 1.46
Pdlim3-201ENSMUST00000034053 Cttnbp2B9EJA2 1648 aa24.14■■□□□ 1.46
Pdlim3-201ENSMUST00000034053 Iqgap2Q3UQ44 1575 aa24.12■■□□□ 1.45
Pdlim3-201ENSMUST00000034053 CftrP26361 1476 aa24.11■■□□□ 1.45
Pdlim3-201ENSMUST00000034053 Thoc2B1AZI6 1594 aaKnown RBP23.98■■□□□ 1.43
Pdlim3-201ENSMUST00000034053 Ercc6F8VPZ5 1481 aa23.87■■□□□ 1.41
Pdlim3-201ENSMUST00000034053 Wdr62Q3U3T8 1523 aa23.81■■□□□ 1.4
Pdlim3-201ENSMUST00000034053 Golga3P55937 1487 aa23.78■■□□□ 1.4
Pdlim3-201ENSMUST00000034053 Top2bQ64511 1612 aa23.76■■□□□ 1.39
Pdlim3-201ENSMUST00000034053 HrcG5E8J6 738 aa23.75■■□□□ 1.39
Pdlim3-201ENSMUST00000034053 Frmpd1A2AKB4 1549 aa23.75■■□□□ 1.39
Pdlim3-201ENSMUST00000034053 Cc2d2aQ8CFW7 1633 aa23.62■■□□□ 1.37
Pdlim3-201ENSMUST00000034053 Unc13aQ4KUS2 1712 aa23.6■■□□□ 1.37
Pdlim3-201ENSMUST00000034053 Esf1Q3V1V3 845 aaKnown RBP23.59■■□□□ 1.37
Pdlim3-201ENSMUST00000034053 Cngb1E1AZ71 1325 aa23.59■■□□□ 1.37
Pdlim3-201ENSMUST00000034053 Fam135aQ6NS59 1506 aa23.54■■□□□ 1.36
Pdlim3-201ENSMUST00000034053 Dnajc5bQ9CQ94 199 aa23.54■■□□□ 1.36
Pdlim3-201ENSMUST00000034053 Rsf1E9PWW9 1441 aaKnown RBP23.45■■□□□ 1.34
Pdlim3-201ENSMUST00000034053 Ccdc88bQ4QRL3 1481 aa23.43■■□□□ 1.34
Pdlim3-201ENSMUST00000034053 Phldb1Q6PDH0 1371 aaKnown RBP23.43■■□□□ 1.34
Pdlim3-201ENSMUST00000034053 Cep164Q5DU05 1446 aa23.42■■□□□ 1.34
Pdlim3-201ENSMUST00000034053 Fmn1Q05860 1466 aa23.32■■□□□ 1.32
Pdlim3-201ENSMUST00000034053 Chic1Q8CBW7 227 aa23.31■■□□□ 1.32
Pdlim3-201ENSMUST00000034053 TnnQ80Z71 1560 aa23.31■■□□□ 1.32
Pdlim3-201ENSMUST00000034053 Lamc3Q9R0B6 1581 aa23.25■■□□□ 1.31
Pdlim3-201ENSMUST00000034053 Baz1bQ9Z277 1479 aa23.23■■□□□ 1.31
Pdlim3-201ENSMUST00000034053 Ubl4bQ9CQ84 188 aa23.15■■□□□ 1.3
Pdlim3-201ENSMUST00000034053 Top2aQ01320 1528 aaKnown RBP23.13■■□□□ 1.29
Pdlim3-201ENSMUST00000034053 Kif15Q6P9L6 1387 aa23.07■■□□□ 1.28
Pdlim3-201ENSMUST00000034053 Mrc2Q64449 1479 aa22.96■■□□□ 1.27
Pdlim3-201ENSMUST00000034053 Camsap1A2AHC3 1581 aa22.95■■□□□ 1.26
Pdlim3-201ENSMUST00000034053 Cux2P70298 1426 aa22.92■■□□□ 1.26
Pdlim3-201ENSMUST00000034053 Gab3Q8BSM5 595 aa22.86■■□□□ 1.25
Pdlim3-201ENSMUST00000034053 Rapgef2Q8CHG7 1496 aa22.79■■□□□ 1.24
Pdlim3-201ENSMUST00000034053 Ccdc18Q640L5 1455 aa22.78■■□□□ 1.24
Pdlim3-201ENSMUST00000034053 Kif21aQ9QXL2 1672 aa22.71■■□□□ 1.23
Pdlim3-201ENSMUST00000034053 Npm1Q61937 292 aaKnown RBP22.68■■□□□ 1.22
Pdlim3-201ENSMUST00000034053 Eif4g1Q6NZJ6 1600 aaKnown RBP22.67■■□□□ 1.22
Pdlim3-201ENSMUST00000034053 Grin2bQ01097 1482 aa22.67■■□□□ 1.22
Pdlim3-201ENSMUST00000034053 Il27Q8K3I6 234 aa22.65■■□□□ 1.22
Pdlim3-201ENSMUST00000034053 NrkQ9R0G8 1455 aa22.63■■□□□ 1.21
Pdlim3-201ENSMUST00000034053 PtprkP35822 1457 aa22.61■■□□□ 1.21
Pdlim3-201ENSMUST00000034053 Shroom4Q1W617 1475 aa22.6■■□□□ 1.21
Pdlim3-201ENSMUST00000034053 Cep162Q6ZQ06 1403 aa22.57■■□□□ 1.2
Pdlim3-201ENSMUST00000034053 LrpprcQ6PB66 1392 aaKnown RBP22.55■■□□□ 1.2
Pdlim3-201ENSMUST00000034053 PogzQ8BZH4 1409 aaKnown RBP22.5■■□□□ 1.19
Pdlim3-201ENSMUST00000034053 Dhx29Q6PGC1 1365 aaKnown RBP22.49■■□□□ 1.19
Pdlim3-201ENSMUST00000034053 Lrriq1Q0P5X1 1673 aa22.49■■□□□ 1.19
Pdlim3-201ENSMUST00000034053 Crocc2F6XLV1 1638 aa22.46■■□□□ 1.19
Pdlim3-201ENSMUST00000034053 Arhgap35Q91YM2 1499 aa22.44■■□□□ 1.18
Pdlim3-201ENSMUST00000034053 Duox2A2AQ99 1517 aa22.43■■□□□ 1.18
Pdlim3-201ENSMUST00000034053 Npm2Q80W85 207 aa22.42■■□□□ 1.18
Pdlim3-201ENSMUST00000034053 Efcab5A0JP43 1406 aa22.4■■□□□ 1.18
Pdlim3-201ENSMUST00000034053 Samd9lQ69Z37 1561 aa22.37■■□□□ 1.17
Pdlim3-201ENSMUST00000034053 Map3k1P53349 1493 aa22.36■■□□□ 1.17
Pdlim3-201ENSMUST00000034053 Mroh2bQ7M6Y6 1581 aa22.33■■□□□ 1.17
Pdlim3-201ENSMUST00000034053 Urb2E9Q7L1 1524 aaKnown RBP22.32■■□□□ 1.16
Pdlim3-201ENSMUST00000034053 Ehmt2Q9Z148 1263 aaKnown RBP22.31■■□□□ 1.16
Pdlim3-201ENSMUST00000034053 Plb1Q3TTY0 1478 aa22.3■■□□□ 1.16
Pdlim3-201ENSMUST00000034053 AqrQ8CFQ3 1481 aaKnown RBP22.24■■□□□ 1.15
Pdlim3-201ENSMUST00000034053 SynmQ70IV5 1561 aa22.23■■□□□ 1.15
Pdlim3-201ENSMUST00000034053 Myt1lP97500 1187 aa22.23■■□□□ 1.15
Pdlim3-201ENSMUST00000034053 Setd1bQ8CFT2 1985 aa22.2■■□□□ 1.14
Pdlim3-201ENSMUST00000034053 Eif4g3Q80XI3 1579 aaKnown RBP22.16■■□□□ 1.14
Pdlim3-201ENSMUST00000034053 Ift140E9PY46 1464 aa22.15■■□□□ 1.14
Pdlim3-201ENSMUST00000034053 Clip1Q922J3 1391 aa22.12■■□□□ 1.13
Pdlim3-201ENSMUST00000034053 Rad54l2Q99NG0 1466 aa22.12■■□□□ 1.13
Pdlim3-201ENSMUST00000034053 Pbrm1Q8BSQ9 1634 aaKnown RBP22.1■■□□□ 1.13
Pdlim3-201ENSMUST00000034053 Zeb1Q64318 1117 aa22.09■■□□□ 1.13
Pdlim3-201ENSMUST00000034053 Erich3F6QRE9 1637 aa22.09■■□□□ 1.13
Pdlim3-201ENSMUST00000034053 Disp1Q3TDN0 1521 aa22.08■■□□□ 1.13
Pdlim3-201ENSMUST00000034053 Magi3Q9EQJ9 1476 aa22.08■■□□□ 1.12
Pdlim3-201ENSMUST00000034053 Carmil1Q6EDY6 1374 aa22.07■■□□□ 1.12
Pdlim3-201ENSMUST00000034053 Ankrd26Q811D2 1581 aa22.07■■□□□ 1.12
Pdlim3-201ENSMUST00000034053 Pla2r1Q62028 1487 aa22.04■■□□□ 1.12
Retrieved 100 of 22,080 RNA–protein pairs in 138.4 ms