RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 APL6P46682 809 aa1.71□□□□□ -2.14
snR50snR50 YNL165WP53891 406 aa1.71□□□□□ -2.14
snR50snR50 KTR1P27810 393 aaKnown RBP1.69□□□□□ -2.14
snR50snR50 HAL5P38970 855 aaKnown RBP1.69□□□□□ -2.14
snR50snR50 SLI1P53304 468 aa1.69□□□□□ -2.14
snR50snR50 ISR1Q06098 443 aaKnown RBP1.69□□□□□ -2.14
snR50snR50 PNS1Q12412 539 aa1.69□□□□□ -2.14
snR50snR50 YLR358CO13565 187 aa1.68□□□□□ -2.14
snR50snR50 TBS1P38114 1094 aa1.68□□□□□ -2.14
snR50snR50 SLP1Q12232 587 aa1.68□□□□□ -2.14
snR50snR50 ARG8P18544 423 aa1.66□□□□□ -2.14
snR50snR50 DSF2P38213 736 aa1.66□□□□□ -2.14
snR50snR50 TED1P40533 473 aa1.66□□□□□ -2.14
snR50snR50 PKH3Q03306 898 aaPredicted RBP1.66□□□□□ -2.14
snR50snR50 SKP1P52286 194 aa1.65□□□□□ -2.15
snR50snR50 TUB2P02557 457 aaKnown RBP1.64□□□□□ -2.15
snR50snR50 HSP78P33416 811 aa1.64□□□□□ -2.15
snR50snR50 YNR040WP53736 256 aa1.64□□□□□ -2.15
snR50snR50 STE20Q03497 939 aaKnown RBP1.64□□□□□ -2.15
snR50snR50 AIM3P38266 947 aaKnown RBP1.63□□□□□ -2.15
snR50snR50 HPC2Q01448 625 aa1.63□□□□□ -2.15
snR50snR50 GIP2P40036 548 aa1.62□□□□□ -2.15
snR50snR50 CKB1P43639 278 aa1.62□□□□□ -2.15
snR50snR50 DSE4P53753 1117 aa1.62□□□□□ -2.15
snR50snR50 SHM2P37291 469 aaKnown RBP1.61□□□□□ -2.15
snR50snR50 NCL1P38205 684 aaKnown RBP1.61□□□□□ -2.15
snR50snR50 NCE103P53615 221 aa1.61□□□□□ -2.15
snR50snR50 IDI1P15496 288 aa1.6□□□□□ -2.15
snR50snR50 CTS1P29029 562 aa1.6□□□□□ -2.15
snR50snR50 MLF3P32047 452 aa1.6□□□□□ -2.15
snR50snR50 MSH6Q03834 1242 aa1.6□□□□□ -2.15
snR50snR50 HDA3Q06623 655 aa1.6□□□□□ -2.15
snR50snR50 MAK16P10962 306 aaPredicted RBP1.59□□□□□ -2.15
snR50snR50 RIM8P53179 542 aa1.59□□□□□ -2.15
snR50snR50 ORC3P54790 616 aa1.59□□□□□ -2.15
snR50snR50 CLU1Q03690 1277 aaKnown RBP1.59□□□□□ -2.15
snR50snR50 PUS9Q12069 462 aa1.59□□□□□ -2.15
snR50snR50 CUS1Q02554 436 aaPredicted RBP1.58□□□□□ -2.16
snR50snR50 MCM1P11746 286 aa1.57□□□□□ -2.16
snR50snR50 SOK2P53438 785 aaPredicted RBP1.57□□□□□ -2.16
snR50snR50 RAD53P22216 821 aa1.56□□□□□ -2.16
snR50snR50 TOD6P34219 525 aa1.56□□□□□ -2.16
snR50snR50 YTA6P40328 754 aa1.56□□□□□ -2.16
snR50snR50 MRX12P47084 519 aa1.56□□□□□ -2.16
snR50snR50 SWI5P08153 709 aa1.55□□□□□ -2.16
snR50snR50 RDS2P19541 446 aaKnown RBP1.55□□□□□ -2.16
snR50snR50 APM2P38700 605 aa1.55□□□□□ -2.16
snR50snR50 Q0182Q9ZZW1 134 aa1.55□□□□□ -2.16
snR50snR50 SOD2P00447 233 aa1.54□□□□□ -2.16
snR50snR50 EMP47P43555 445 aa1.54□□□□□ -2.16
snR50snR50 MTO1P53070 669 aa1.54□□□□□ -2.16
snR50snR50 GIC2Q06648 383 aa1.54□□□□□ -2.16
snR50snR50 BDF2Q07442 638 aa1.54□□□□□ -2.16
snR50snR50 YDL177CQ12257 170 aa1.54□□□□□ -2.16
snR50snR50 ISF1P32488 338 aa1.53□□□□□ -2.16
snR50snR50 YER156CP40093 338 aaKnown RBP1.53□□□□□ -2.16
snR50snR50 YPL277CQ08989 487 aa1.53□□□□□ -2.16
snR50snR50 LPX1Q12405 387 aaKnown RBP1.53□□□□□ -2.16
snR50snR50 RPC31P17890 251 aa1.52□□□□□ -2.17
snR50snR50 OYE3P41816 400 aaPredicted RBP1.52□□□□□ -2.17
snR50snR50 MRPL22P53881 309 aa1.52□□□□□ -2.17
snR50snR50 WHI3P34761 661 aaKnown RBP1.51□□□□□ -2.17
snR50snR50 PAN5P38787 379 aa1.51□□□□□ -2.17
snR50snR50 ITC1P53125 1264 aa1.51□□□□□ -2.17
snR50snR50 PRE10P21242 288 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
snR50snR50 POL5P39985 1022 aaKnown RBP1.5□□□□□ -2.17
snR50snR50 CHS7P38843 316 aa1.49□□□□□ -2.17
snR50snR50 MSE1P48525 536 aa1.49□□□□□ -2.17
snR50snR50 CTF4Q01454 927 aa1.49□□□□□ -2.17
snR50snR50 UTP13Q05946 817 aaKnown RBP1.49□□□□□ -2.17
snR50snR50 KAP122P32767 1081 aa1.48□□□□□ -2.17
snR50snR50 SOH1P38633 127 aa1.48□□□□□ -2.17
snR50snR50 MMM1P41800 426 aa1.48□□□□□ -2.17
snR50snR50 CIT3P43635 486 aa1.48□□□□□ -2.17
snR50snR50 SUN4P53616 420 aa1.48□□□□□ -2.17
snR50snR50 TFB3Q03290 321 aa1.48□□□□□ -2.17
snR50snR50 CBC2Q08920 208 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
snR50snR50 TRM2P33753 639 aa1.47□□□□□ -2.17
snR50snR50 MAE1P36013 669 aaKnown RBP1.47□□□□□ -2.17
snR50snR50 ATF1P40353 525 aa1.47□□□□□ -2.17
snR50snR50 UTP4Q06679 776 aaKnown RBP1.47□□□□□ -2.17
snR50snR50 RPS13P05756 151 aaKnown RBP1.46□□□□□ -2.18
snR50snR50 RPS6AP0CX37 236 aaKnown RBP1.46□□□□□ -2.18
snR50snR50 RPS6BP0CX38 236 aaPredicted RBP1.46□□□□□ -2.18
snR50snR50 ADP1P25371 1049 aa1.46□□□□□ -2.18
snR50snR50 RCM1P53972 490 aa1.46□□□□□ -2.18
snR50snR50 ERS1P17261 260 aa1.45□□□□□ -2.18
snR50snR50 KIP3P53086 805 aaKnown RBP1.45□□□□□ -2.18
snR50snR50 SSY1Q03770 852 aa1.45□□□□□ -2.18
snR50snR50 ATF2P53296 535 aa1.44□□□□□ -2.18
snR50snR50 ELG1Q12050 791 aa1.44□□□□□ -2.18
snR50snR50 NSI1Q12457 570 aa1.44□□□□□ -2.18
snR50snR50 TFA2P36145 328 aa1.43□□□□□ -2.18
snR50snR50 TAT2P38967 592 aa1.43□□□□□ -2.18
snR50snR50 PEX7P39108 375 aa1.43□□□□□ -2.18
snR50snR50 CSN12P47130 423 aa1.43□□□□□ -2.18
snR50snR50 MPT5P39016 859 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
snR50snR50 AIM9P40053 627 aaKnown RBP1.42□□□□□ -2.18
snR50snR50 GUP1P53154 560 aa1.42□□□□□ -2.18
snR50snR50 YOR059CQ08448 450 aaKnown RBP1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms