RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 REC8Q12188 680 aa1.44□□□□□ -2.18
snR38snR38 THI80P35202 319 aa1.43□□□□□ -2.18
snR38snR38 TY4B-PA0A0B7P3V8 1104 aa1.42□□□□□ -2.18
snR38snR38 TSA1P34760 196 aaKnown RBP1.42□□□□□ -2.18
snR38snR38 DSF2P38213 736 aa1.42□□□□□ -2.18
snR38snR38 YNR065CP53751 1116 aa1.42□□□□□ -2.18
snR38snR38 TFB3Q03290 321 aa1.42□□□□□ -2.18
snR38snR38 TY4A-HQ6Q5P6 413 aa1.42□□□□□ -2.18
snR38snR38 RPS31P05759 152 aaKnown RBP1.41□□□□□ -2.18
snR38snR38 SLX8P40072 274 aa1.41□□□□□ -2.18
snR38snR38 ALD2P47771 506 aa1.41□□□□□ -2.18
snR38snR38 ATF2P53296 535 aa1.41□□□□□ -2.18
snR38snR38 RAD59Q12223 238 aa1.41□□□□□ -2.18
snR38snR38 SEA4P38164 1038 aa1.4□□□□□ -2.19
snR38snR38 HPC2Q01448 625 aa1.4□□□□□ -2.19
snR38snR38 HSP78P33416 811 aa1.39□□□□□ -2.19
snR38snR38 URN1Q06525 465 aaKnown RBP1.39□□□□□ -2.19
snR38snR38 DIT2P21595 489 aa1.38□□□□□ -2.19
snR38snR38 GIP2P40036 548 aa1.38□□□□□ -2.19
snR38snR38 ATG3P40344 310 aa1.38□□□□□ -2.19
snR38snR38 TED1P40533 473 aa1.38□□□□□ -2.19
snR38snR38 RIM8P53179 542 aa1.38□□□□□ -2.19
snR38snR38 GCD1P09032 578 aaPredicted RBP1.37□□□□□ -2.19
snR38snR38 MAK16P10962 306 aaPredicted RBP1.37□□□□□ -2.19
snR38snR38 APM2P38700 605 aa1.37□□□□□ -2.19
snR38snR38 SKP1P52286 194 aa1.37□□□□□ -2.19
snR38snR38 GIC2Q06648 383 aa1.37□□□□□ -2.19
snR38snR38 YOR059CQ08448 450 aaKnown RBP1.37□□□□□ -2.19
snR38snR38 YLR358CO13565 187 aa1.36□□□□□ -2.19
snR38snR38 MCM1P11746 286 aa1.36□□□□□ -2.19
snR38snR38 MMM1P41800 426 aa1.36□□□□□ -2.19
snR38snR38 CIT3P43635 486 aa1.36□□□□□ -2.19
snR38snR38 MTO1P53070 669 aa1.36□□□□□ -2.19
snR38snR38 YPQ2Q06328 317 aa1.36□□□□□ -2.19
snR38snR38 MLF3P32047 452 aa1.35□□□□□ -2.19
snR38snR38 MAE1P36013 669 aaKnown RBP1.35□□□□□ -2.19
snR38snR38 AIM3P38266 947 aaKnown RBP1.35□□□□□ -2.19
snR38snR38 APL6P46682 809 aa1.35□□□□□ -2.19
snR38snR38 UTP13Q05946 817 aaKnown RBP1.35□□□□□ -2.19
snR38snR38 HDA3Q06623 655 aa1.35□□□□□ -2.19
snR38snR38 ADP1P25371 1049 aa1.34□□□□□ -2.19
snR38snR38 SHM2P37291 469 aaKnown RBP1.34□□□□□ -2.19
snR38snR38 LEM3P42838 414 aa1.34□□□□□ -2.19
snR38snR38 EMP47P43555 445 aa1.34□□□□□ -2.19
snR38snR38 SOK2P53438 785 aaPredicted RBP1.34□□□□□ -2.19
snR38snR38 RSC2Q06488 889 aa1.34□□□□□ -2.19
snR38snR38 BDF2Q07442 638 aa1.34□□□□□ -2.19
snR38snR38 SOD2P00447 233 aa1.33□□□□□ -2.2
snR38snR38 SWI5P08153 709 aa1.33□□□□□ -2.2
snR38snR38 RDS2P19541 446 aaKnown RBP1.33□□□□□ -2.2
snR38snR38 TOD6P34219 525 aa1.33□□□□□ -2.2
snR38snR38 HAL5P38970 855 aaKnown RBP1.33□□□□□ -2.2
snR38snR38 ORC3P54790 616 aa1.33□□□□□ -2.2
snR38snR38 CUS1Q02554 436 aaPredicted RBP1.33□□□□□ -2.2
snR38snR38 CLU1Q03690 1277 aaKnown RBP1.33□□□□□ -2.2
snR38snR38 Q0182Q9ZZW1 134 aa1.33□□□□□ -2.2
snR38snR38 IDI1P15496 288 aa1.32□□□□□ -2.2
snR38snR38 TRM2P33753 639 aa1.32□□□□□ -2.2
snR38snR38 YER156CP40093 338 aaKnown RBP1.32□□□□□ -2.2
snR38snR38 YFL034WP43564 1073 aa1.32□□□□□ -2.2
snR38snR38 IOC3P43596 787 aa1.32□□□□□ -2.2
snR38snR38 NCE103P53615 221 aa1.32□□□□□ -2.2
snR38snR38 MRPL22P53881 309 aa1.32□□□□□ -2.2
snR38snR38 YNL165WP53891 406 aa1.32□□□□□ -2.2
snR38snR38 RCM1P53972 490 aa1.32□□□□□ -2.2
snR38snR38 UTP4Q06679 776 aaKnown RBP1.32□□□□□ -2.2
snR38snR38 PUS9Q12069 462 aa1.32□□□□□ -2.2
snR38snR38 SPB4P25808 606 aaPredicted RBP1.31□□□□□ -2.2
snR38snR38 CTS1P29029 562 aa1.31□□□□□ -2.2
snR38snR38 KAP122P32767 1081 aa1.31□□□□□ -2.2
snR38snR38 CSN12P47130 423 aa1.31□□□□□ -2.2
snR38snR38 MSE1P48525 536 aa1.31□□□□□ -2.2
snR38snR38 MRP10O75012 95 aa1.3□□□□□ -2.2
snR38snR38 RAD53P22216 821 aa1.3□□□□□ -2.2
snR38snR38 SOH1P38633 127 aa1.3□□□□□ -2.2
snR38snR38 PAN5P38787 379 aa1.3□□□□□ -2.2
snR38snR38 RPS13P05756 151 aaKnown RBP1.29□□□□□ -2.2
snR38snR38 KTR1P27810 393 aaKnown RBP1.29□□□□□ -2.2
snR38snR38 AIM9P40053 627 aaKnown RBP1.29□□□□□ -2.2
snR38snR38 GUP1P53154 560 aa1.29□□□□□ -2.2
snR38snR38 CBC2Q08920 208 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
snR38snR38 RPS6AP0CX37 236 aaKnown RBP1.28□□□□□ -2.2
snR38snR38 RPS6BP0CX38 236 aaPredicted RBP1.28□□□□□ -2.2
snR38snR38 SPT5P27692 1063 aaKnown RBP1.28□□□□□ -2.2
snR38snR38 ISF1P32488 338 aa1.28□□□□□ -2.2
snR38snR38 SCD5P34758 872 aa1.28□□□□□ -2.2
snR38snR38 WHI3P34761 661 aaKnown RBP1.28□□□□□ -2.2
snR38snR38 MPT5P39016 859 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
snR38snR38 YPP1P46951 817 aa1.28□□□□□ -2.2
snR38snR38 YNR040WP53736 256 aa1.28□□□□□ -2.2
snR38snR38 CTF4Q01454 927 aa1.28□□□□□ -2.2
snR38snR38 SPO71Q03868 1245 aa1.28□□□□□ -2.2
snR38snR38 FAR11P53917 953 aa1.27□□□□□ -2.21
snR38snR38 YPL277CQ08989 487 aa1.27□□□□□ -2.21
snR38snR38 ELG1Q12050 791 aa1.27□□□□□ -2.21
snR38snR38 SSA2P10592 639 aaKnown RBP1.26□□□□□ -2.21
snR38snR38 RPC31P17890 251 aa1.26□□□□□ -2.21
snR38snR38 PRE10P21242 288 aaKnown RBP RIP-Chip data1.26□□□□□ -2.21not detected
snR38snR38 CSE4P36012 229 aa1.26□□□□□ -2.21
snR38snR38 TAT2P38967 592 aa1.26□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms