RNA–Protein interactions for RNA: YOR322C

LDB19, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene LDB19, Length 2,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB19YOR322C GGA2P38817 585 aaKnown RBP6.67□□□□□ -1.34
LDB19YOR322C DBP9Q06218 594 aaKnown RBP6.67□□□□□ -1.34
LDB19YOR322C THS1P04801 734 aaKnown RBP6.67□□□□□ -1.34
LDB19YOR322C COY1P34237 679 aa6.67□□□□□ -1.34
LDB19YOR322C RXT2P38255 430 aa6.67□□□□□ -1.34
LDB19YOR322C SRB7P47822 140 aa6.67□□□□□ -1.34
LDB19YOR322C SPO19Q03029 223 aa6.67□□□□□ -1.34
LDB19YOR322C CFT1Q06632 1357 aaKnown RBP6.66□□□□□ -1.34
LDB19YOR322C TUF1P02992 437 aaKnown RBP6.66□□□□□ -1.34
LDB19YOR322C HMG1P12683 1054 aa6.66□□□□□ -1.34
LDB19YOR322C TRX2P22803 104 aaKnown RBP6.66□□□□□ -1.34
LDB19YOR322C STE11P23561 717 aa6.66□□□□□ -1.34
LDB19YOR322C STN1P38960 494 aa6.66□□□□□ -1.34
LDB19YOR322C GTT3P39996 337 aa6.66□□□□□ -1.34
LDB19YOR322C SET2P46995 733 aaKnown RBP6.66□□□□□ -1.34
LDB19YOR322C RTC4P53850 401 aa6.66□□□□□ -1.34
LDB19YOR322C MMS1Q06211 1407 aa6.66□□□□□ -1.34
LDB19YOR322C FOB1O13329 566 aa6.66□□□□□ -1.34
LDB19YOR322C NAT1P12945 854 aaKnown RBP6.66□□□□□ -1.34
LDB19YOR322C THR4P16120 514 aaKnown RBP6.66□□□□□ -1.34
LDB19YOR322C STO1P34160 861 aaKnown RBP6.66□□□□□ -1.34
LDB19YOR322C YEL1P34225 687 aa6.66□□□□□ -1.34
LDB19YOR322C EXO84P38261 753 aa6.65□□□□□ -1.34
LDB19YOR322C YMR1P47147 688 aaKnown RBP RIP-Chip data6.65□□□□□ -1.34not detected
LDB19YOR322C HOL1P53389 586 aa6.65□□□□□ -1.34
LDB19YOR322C RME1P32338 300 aaKnown RBP6.65□□□□□ -1.35
LDB19YOR322C ECM32P32644 1121 aaKnown RBP6.65□□□□□ -1.35
LDB19YOR322C RRF1P38771 230 aa6.65□□□□□ -1.35
LDB19YOR322C TOM71P38825 639 aaKnown RBP6.65□□□□□ -1.35
LDB19YOR322C RRP8P38961 392 aaKnown RBP6.65□□□□□ -1.35
LDB19YOR322C VPS30Q02948 557 aa6.65□□□□□ -1.35
LDB19YOR322C OYE2Q03558 400 aaKnown RBP6.65□□□□□ -1.35
LDB19YOR322C SSQ1Q05931 657 aaPredicted RBP6.65□□□□□ -1.35
LDB19YOR322C YLH47Q06493 454 aa6.65□□□□□ -1.35
LDB19YOR322C HNM1P19807 563 aa6.64□□□□□ -1.35
LDB19YOR322C SAS3P34218 831 aa6.64□□□□□ -1.35
LDB19YOR322C ABZ1P37254 787 aaPredicted RBP6.64□□□□□ -1.35
LDB19YOR322C TBS1P38114 1094 aa6.64□□□□□ -1.35
LDB19YOR322C APE4P38821 490 aa6.64□□□□□ -1.35
LDB19YOR322C UTP18P40362 594 aaPredicted RBP6.64□□□□□ -1.35
LDB19YOR322C SDS3P40505 327 aa6.64□□□□□ -1.35
LDB19YOR322C DAS1P47005 663 aa6.64□□□□□ -1.35
LDB19YOR322C VTC4P47075 721 aa6.64□□□□□ -1.35
LDB19YOR322C YGR016WP53209 190 aa6.64□□□□□ -1.35
LDB19YOR322C UBP10P53874 792 aaPredicted RBP6.64□□□□□ -1.35
LDB19YOR322C PNG1Q02890 363 aa6.64□□□□□ -1.35
LDB19YOR322C SNZ1Q03148 297 aa6.64□□□□□ -1.35
LDB19YOR322C SPP382Q06411 708 aaPredicted RBP6.64□□□□□ -1.35
LDB19YOR322C DNF2Q12675 1612 aa6.64□□□□□ -1.35
LDB19YOR322C BUD14P27637 709 aa6.64□□□□□ -1.35
LDB19YOR322C SMY2P32909 740 aaKnown RBP6.64□□□□□ -1.35
LDB19YOR322C TIF3P34167 436 aaKnown RBP6.64□□□□□ -1.35
LDB19YOR322C SNF7P39929 240 aaKnown RBP6.64□□□□□ -1.35
LDB19YOR322C SUM1P46676 1062 aa6.64□□□□□ -1.35
LDB19YOR322C RIM21P48565 533 aa6.64□□□□□ -1.35
LDB19YOR322C PEX19Q07418 342 aa6.64□□□□□ -1.35
LDB19YOR322C GRC3Q07845 632 aa6.64□□□□□ -1.35
LDB19YOR322C AAD3P25612 363 aa6.63□□□□□ -1.35
LDB19YOR322C SMY1P32364 656 aaKnown RBP6.63□□□□□ -1.35
LDB19YOR322C SLD2P34252 453 aa6.63□□□□□ -1.35
LDB19YOR322C RTG3P38165 486 aa6.63□□□□□ -1.35
LDB19YOR322C PXR1P53335 271 aaPredicted RBP6.63□□□□□ -1.35
LDB19YOR322C CLB1P24868 471 aa6.62□□□□□ -1.35
LDB19YOR322C PUF4P25339 888 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35not detected
LDB19YOR322C FMP10P40098 244 aa6.62□□□□□ -1.35
LDB19YOR322C LAM5P43560 674 aa6.62□□□□□ -1.35
LDB19YOR322C NNF1P47149 201 aa6.62□□□□□ -1.35
LDB19YOR322C RSM28Q03430 361 aa6.62□□□□□ -1.35
LDB19YOR322C YMR111CQ04461 462 aaPredicted RBP6.62□□□□□ -1.35
LDB19YOR322C HMI1Q12039 706 aa6.62□□□□□ -1.35
LDB19YOR322C HOM3P10869 527 aa6.62□□□□□ -1.35
LDB19YOR322C SEC15P22224 910 aa6.62□□□□□ -1.35
LDB19YOR322C VPS29P38759 282 aa6.62□□□□□ -1.35
LDB19YOR322C SXM1Q04175 944 aaKnown RBP6.62□□□□□ -1.35
LDB19YOR322C SLX4Q12098 748 aa6.62□□□□□ -1.35
LDB19YOR322C MPH2P0CD99 609 aa6.61□□□□□ -1.35
LDB19YOR322C PKC1P24583 1151 aa6.61□□□□□ -1.35
LDB19YOR322C PSE1P32337 1089 aaKnown RBP6.61□□□□□ -1.35
LDB19YOR322C APL2P36000 726 aaPredicted RBP6.61□□□□□ -1.35
LDB19YOR322C OTU2P38747 307 aaKnown RBP6.61□□□□□ -1.35
LDB19YOR322C ERC1P38767 581 aa6.61□□□□□ -1.35
LDB19YOR322C ACF4P47129 309 aa6.61□□□□□ -1.35
LDB19YOR322C ATG2P53855 1592 aa6.61□□□□□ -1.35
LDB19YOR322C SKI3P17883 1432 aaKnown RBP6.61□□□□□ -1.35
LDB19YOR322C MAK11P20484 414 aaKnown RBP6.61□□□□□ -1.35
LDB19YOR322C YBL028CP38202 106 aa6.61□□□□□ -1.35
LDB19YOR322C MXR1P40029 184 aa6.61□□□□□ -1.35
LDB19YOR322C TIM54P47045 478 aa6.61□□□□□ -1.35
LDB19YOR322C TAP42Q04372 366 aa6.61□□□□□ -1.35
LDB19YOR322C AOS1Q06624 347 aa6.61□□□□□ -1.35
LDB19YOR322C CIT2P08679 460 aa6.6□□□□□ -1.35
LDB19YOR322C EFB1P32471 206 aaKnown RBP6.6□□□□□ -1.35
LDB19YOR322C SWH1P35845 1188 aa6.6□□□□□ -1.35
LDB19YOR322C SSZ1P38788 538 aaKnown RBP6.6□□□□□ -1.35
LDB19YOR322C YIR042CP40586 236 aa6.6□□□□□ -1.35
LDB19YOR322C IAH1P41734 238 aa6.6□□□□□ -1.35
LDB19YOR322C ALG2P43636 503 aa6.6□□□□□ -1.35
LDB19YOR322C RAD33Q04231 177 aa6.6□□□□□ -1.35
LDB19YOR322C SWC3P31376 625 aa6.6□□□□□ -1.35
LDB19YOR322C ATG14P38270 344 aa6.6□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms