RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C SPR3P41901 512 aa4.89□□□□□ -1.63
SHE4YOR035C CCP1P00431 361 aa4.88□□□□□ -1.63
SHE4YOR035C DIT1P21623 536 aa4.88□□□□□ -1.63
SHE4YOR035C ACF4P47129 309 aa4.88□□□□□ -1.63
SHE4YOR035C APC11Q12157 165 aa4.88□□□□□ -1.63
SHE4YOR035C CEM1P39525 442 aa4.87□□□□□ -1.63
SHE4YOR035C HXT8P40886 569 aa4.87□□□□□ -1.63
SHE4YOR035C MDJ2P42834 146 aa4.87□□□□□ -1.63
SHE4YOR035C KRE33P53914 1056 aaKnown RBP4.87□□□□□ -1.63
SHE4YOR035C CUS1Q02554 436 aaPredicted RBP4.87□□□□□ -1.63
SHE4YOR035C YDL176WQ12027 708 aa4.87□□□□□ -1.63
SHE4YOR035C SLD2P34252 453 aa4.87□□□□□ -1.63
SHE4YOR035C RPC31P17890 251 aa4.86□□□□□ -1.63
SHE4YOR035C STM1P39015 273 aaKnown RBP4.86□□□□□ -1.63
SHE4YOR035C FIR1P40020 876 aa4.86□□□□□ -1.63
SHE4YOR035C BSD2P38356 321 aa4.86□□□□□ -1.63
SHE4YOR035C YHL050CP38721 697 aa4.86□□□□□ -1.63
SHE4YOR035C YHR219WP38900 624 aa4.86□□□□□ -1.63
SHE4YOR035C YOR296WQ08748 1289 aa4.86□□□□□ -1.63
SHE4YOR035C RPP1AP05318 106 aaPredicted RBP4.85□□□□□ -1.63
SHE4YOR035C MSN1P22148 382 aa4.85□□□□□ -1.63
SHE4YOR035C SMC1P32908 1225 aa4.85□□□□□ -1.63
SHE4YOR035C NOP8Q08287 484 aaPredicted RBP4.85□□□□□ -1.63
SHE4YOR035C FPS1P23900 669 aa4.85□□□□□ -1.63
SHE4YOR035C GIP1P38229 639 aa4.85□□□□□ -1.63
SHE4YOR035C ADE12P80210 433 aaKnown RBP4.85□□□□□ -1.63
SHE4YOR035C KTR2P33550 425 aa4.84□□□□□ -1.63
SHE4YOR035C ISW1P38144 1129 aa4.84□□□□□ -1.63
SHE4YOR035C NCL1P38205 684 aaKnown RBP4.84□□□□□ -1.63
SHE4YOR035C SKP1P52286 194 aa4.84□□□□□ -1.63
SHE4YOR035C UFD2P54860 961 aa4.84□□□□□ -1.63
SHE4YOR035C NUT2Q06213 157 aa4.84□□□□□ -1.63
SHE4YOR035C NAB2P32505 525 aaKnown RBP RIP-Chip data4.84□□□□□ -1.64not detected
SHE4YOR035C YBR287WP38355 427 aa4.84□□□□□ -1.64
SHE4YOR035C RAD55P38953 406 aa4.84□□□□□ -1.64
SHE4YOR035C APM2P38700 605 aa4.83□□□□□ -1.64
SHE4YOR035C YGR035CP53222 116 aa4.83□□□□□ -1.64
SHE4YOR035C TRS120Q04183 1289 aa4.83□□□□□ -1.64
SHE4YOR035C YDR461C-AQ2V2P7 80 aa4.83□□□□□ -1.64
SHE4YOR035C SYT1Q06836 1226 aa4.83□□□□□ -1.64
SHE4YOR035C LYS5P50113 272 aa4.82□□□□□ -1.64
SHE4YOR035C YNR040WP53736 256 aa4.82□□□□□ -1.64
SHE4YOR035C FRT1Q99332 602 aa4.82□□□□□ -1.64
SHE4YOR035C SEC20P28791 383 aa4.82□□□□□ -1.64
SHE4YOR035C THI12P42883 340 aa4.82□□□□□ -1.64
SHE4YOR035C THI5P43534 340 aa4.82□□□□□ -1.64
SHE4YOR035C RGD2P43556 714 aa4.82□□□□□ -1.64
SHE4YOR035C THI11P47183 340 aa4.82□□□□□ -1.64
SHE4YOR035C ITC1P53125 1264 aa4.82□□□□□ -1.64
SHE4YOR035C SEN54Q02825 467 aaPredicted RBP4.82□□□□□ -1.64
SHE4YOR035C THI13Q07748 340 aa4.82□□□□□ -1.64
SHE4YOR035C NTA1P40354 457 aa4.81□□□□□ -1.64
SHE4YOR035C HEH2Q03281 663 aa4.81□□□□□ -1.64
SHE4YOR035C MSC6Q08818 692 aaKnown RBP4.81□□□□□ -1.64
SHE4YOR035C HPF1Q05164 967 aa4.8□□□□□ -1.64
SHE4YOR035C AIM46P38885 310 aa4.8□□□□□ -1.64
SHE4YOR035C IPL1P38991 367 aa4.8□□□□□ -1.64
SHE4YOR035C TIF6Q12522 245 aaKnown RBP4.8□□□□□ -1.64
SHE4YOR035C IRS4P36115 615 aaKnown RBP4.79□□□□□ -1.64
SHE4YOR035C MSC7P38694 644 aa4.79□□□□□ -1.64
SHE4YOR035C PSY2P40164 858 aa4.79□□□□□ -1.64
SHE4YOR035C YPL062WQ02781 134 aa4.79□□□□□ -1.64
SHE4YOR035C TY1A-DR2Q03964 440 aaKnown RBP4.79□□□□□ -1.64
SHE4YOR035C PPX1P38698 397 aa4.79□□□□□ -1.64
SHE4YOR035C DPH6Q12429 685 aa4.78□□□□□ -1.64
SHE4YOR035C YIL165CP40446 119 aa4.78□□□□□ -1.64
SHE4YOR035C JJJ3P47138 172 aa4.78□□□□□ -1.64
SHE4YOR035C EMG1Q06287 252 aaKnown RBP4.78□□□□□ -1.64
SHE4YOR035C IDI1P15496 288 aa4.77□□□□□ -1.65
SHE4YOR035C YNL011CP53980 444 aa4.77□□□□□ -1.65
SHE4YOR035C MNL2Q12205 849 aa4.77□□□□□ -1.65
SHE4YOR035C PRK1P40494 810 aa4.77□□□□□ -1.65
SHE4YOR035C PPT1P53043 513 aa4.77□□□□□ -1.65
SHE4YOR035C RSC2Q06488 889 aa4.77□□□□□ -1.65
SHE4YOR035C YER156CP40093 338 aaKnown RBP4.76□□□□□ -1.65
SHE4YOR035C YJL181WP46987 611 aa4.76□□□□□ -1.65
SHE4YOR035C RSC4Q02206 625 aa4.76□□□□□ -1.65
SHE4YOR035C GPI13Q07830 1017 aa4.76□□□□□ -1.65
SHE4YOR035C WHI5Q12416 295 aa4.76□□□□□ -1.65
SHE4YOR035C CDC55Q00362 526 aa4.76□□□□□ -1.65
SHE4YOR035C HEM3P28789 327 aa4.75□□□□□ -1.65
SHE4YOR035C GPM1P00950 247 aaKnown RBP4.75□□□□□ -1.65
SHE4YOR035C BSC2Q05611 235 aa4.75□□□□□ -1.65
SHE4YOR035C PDC5P16467 563 aaKnown RBP4.74□□□□□ -1.65
SHE4YOR035C ECM2P38241 364 aaKnown RBP4.74□□□□□ -1.65
SHE4YOR035C YHL008CP38750 627 aa4.73□□□□□ -1.65
SHE4YOR035C TRK2P28584 889 aa4.73□□□□□ -1.65
SHE4YOR035C KNS1P32350 737 aaPredicted RBP4.73□□□□□ -1.65
SHE4YOR035C MET4P32389 672 aa4.73□□□□□ -1.65
SHE4YOR035C SAM37P50110 327 aa4.73□□□□□ -1.65
SHE4YOR035C NOC3Q07896 663 aaPredicted RBP4.73□□□□□ -1.65
SHE4YOR035C MRP10O75012 95 aa4.72□□□□□ -1.65
SHE4YOR035C PYC2P32327 1180 aaKnown RBP4.72□□□□□ -1.65
SHE4YOR035C CIC1P38779 376 aaKnown RBP4.72□□□□□ -1.65
SHE4YOR035C POL32P47110 350 aa4.72□□□□□ -1.65
SHE4YOR035C GCD6P32501 712 aaKnown RBP4.71□□□□□ -1.66
SHE4YOR035C INP54Q08227 384 aaKnown RBP4.71□□□□□ -1.66
SHE4YOR035C PHO4P07270 312 aaKnown RBP4.7□□□□□ -1.66
SHE4YOR035C FUS1P11710 512 aa4.7□□□□□ -1.66
SHE4YOR035C ALD3P54114 506 aa4.7□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms