RNA–Protein interactions for RNA: YMR272C

SCS7, Transcript of Sphingolipid alpha-hydroxylase, yeastyeast

Gene SCS7, Length 1,155 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCS7YMR272C SUI2P20459 304 aaKnown RBP7.69□□□□□ -1.18
SCS7YMR272C BOI2P39969 1040 aa7.69□□□□□ -1.18
SCS7YMR272C IRC4Q03036 179 aa7.69□□□□□ -1.18
SCS7YMR272C CST9Q06032 482 aa7.69□□□□□ -1.18
SCS7YMR272C POM152P39685 1337 aa7.69□□□□□ -1.18
SCS7YMR272C GAP1P19145 602 aaPredicted RBP7.68□□□□□ -1.18
SCS7YMR272C PCS60P38137 543 aaKnown RBP RIP-Chip data7.68□□□□□ -1.18not detected
SCS7YMR272C TPS3P38426 1054 aaKnown RBP7.68□□□□□ -1.18
SCS7YMR272C SPL2P38839 148 aa7.68□□□□□ -1.18
SCS7YMR272C YFH7P43591 353 aa7.68□□□□□ -1.18
SCS7YMR272C PUS6P53294 404 aa7.68□□□□□ -1.18
SCS7YMR272C CSR2Q12734 1121 aa7.68□□□□□ -1.18
SCS7YMR272C RAD24P32641 659 aa7.67□□□□□ -1.18
SCS7YMR272C SET4P42948 560 aa7.67□□□□□ -1.18
SCS7YMR272C CSI1Q04368 295 aa7.67□□□□□ -1.18
SCS7YMR272C RBA50Q04418 439 aa7.67□□□□□ -1.18
SCS7YMR272C GAS5Q08193 484 aa7.67□□□□□ -1.18
SCS7YMR272C ADR1P07248 1323 aa7.67□□□□□ -1.18
SCS7YMR272C HVG1P0CE11 249 aa7.66□□□□□ -1.18
SCS7YMR272C SWC3P31376 625 aa7.66□□□□□ -1.18
SCS7YMR272C YNG2P38806 282 aaKnown RBP7.66□□□□□ -1.18
SCS7YMR272C APL6P46682 809 aa7.66□□□□□ -1.18
SCS7YMR272C ENP2P48234 707 aaKnown RBP7.66□□□□□ -1.18
SCS7YMR272C NCS6P53088 359 aa7.66□□□□□ -1.18
SCS7YMR272C NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.66□□□□□ -1.18not detected
SCS7YMR272C GYP5Q12344 894 aa7.66□□□□□ -1.18
SCS7YMR272C LCB1P25045 558 aaKnown RBP7.65□□□□□ -1.18
SCS7YMR272C FIG2P25653 1609 aa7.65□□□□□ -1.18
SCS7YMR272C RPS7AP26786 190 aaKnown RBP7.65□□□□□ -1.18
SCS7YMR272C GEF1P37020 779 aa7.65□□□□□ -1.18
SCS7YMR272C GSC2P40989 1895 aa7.64□□□□□ -1.19
SCS7YMR272C STV1P37296 890 aa7.64□□□□□ -1.19
SCS7YMR272C APE3P37302 537 aaKnown RBP7.64□□□□□ -1.19
SCS7YMR272C YGR122WP53272 402 aa7.64□□□□□ -1.19
SCS7YMR272C GIN4Q12263 1142 aa7.64□□□□□ -1.19
SCS7YMR272C RVB2Q12464 471 aaKnown RBP7.64□□□□□ -1.19
SCS7YMR272C CYB2P00175 591 aa7.63□□□□□ -1.19
SCS7YMR272C MDL2P33311 773 aa7.63□□□□□ -1.19
SCS7YMR272C PIP2P52960 996 aa7.63□□□□□ -1.19
SCS7YMR272C SNU71P53207 620 aaKnown RBP7.63□□□□□ -1.19
SCS7YMR272C VAB2P40003 282 aa7.62□□□□□ -1.19
SCS7YMR272C MSH4P40965 878 aaPredicted RBP7.62□□□□□ -1.19
SCS7YMR272C SPR3P41901 512 aa7.62□□□□□ -1.19
SCS7YMR272C JIP4Q03361 876 aa7.62□□□□□ -1.19
SCS7YMR272C SEC18P18759 758 aaKnown RBP7.61□□□□□ -1.19
SCS7YMR272C NPL4P33755 580 aa7.61□□□□□ -1.19
SCS7YMR272C PCL8Q08966 492 aa7.61□□□□□ -1.19
SCS7YMR272C PMA1P05030 918 aaKnown RBP7.6□□□□□ -1.19
SCS7YMR272C SDH2P21801 266 aa7.6□□□□□ -1.19
SCS7YMR272C BOI1P38041 980 aaKnown RBP7.6□□□□□ -1.19
SCS7YMR272C FPR3P38911 411 aaKnown RBP7.6□□□□□ -1.19
SCS7YMR272C FUN12P39730 1002 aaKnown RBP7.6□□□□□ -1.19
SCS7YMR272C MTC3P53077 123 aa7.6□□□□□ -1.19
SCS7YMR272C YAF9P53930 226 aa7.6□□□□□ -1.19
SCS7YMR272C OCT1P35999 772 aa7.59□□□□□ -1.19
SCS7YMR272C PTK1P36002 662 aaPredicted RBP7.59□□□□□ -1.19
SCS7YMR272C YIL092WP40497 633 aa7.59□□□□□ -1.19
SCS7YMR272C LYS14P40971 790 aa7.59□□□□□ -1.19
SCS7YMR272C YJL171CP46992 396 aa7.59□□□□□ -1.19
SCS7YMR272C NET1P47035 1189 aa7.59□□□□□ -1.19
SCS7YMR272C TOS4Q06266 489 aa7.59□□□□□ -1.19
SCS7YMR272C SUB2Q07478 446 aaKnown RBP7.59□□□□□ -1.19
SCS7YMR272C RAD53P22216 821 aa7.58□□□□□ -1.2
SCS7YMR272C ADP1P25371 1049 aa7.58□□□□□ -1.2
SCS7YMR272C GCD7P32502 381 aaPredicted RBP7.58□□□□□ -1.2
SCS7YMR272C PNT1P38969 423 aa7.58□□□□□ -1.2
SCS7YMR272C MLC1P53141 149 aa7.58□□□□□ -1.2
SCS7YMR272C SPO1P53541 631 aa7.58□□□□□ -1.2
SCS7YMR272C INM2Q05533 292 aa7.58□□□□□ -1.2
SCS7YMR272C SGD1Q06132 899 aa7.58□□□□□ -1.2
SCS7YMR272C TY3A-GQ12173 290 aa7.58□□□□□ -1.2
SCS7YMR272C TY3A-IQ99219 290 aa7.58□□□□□ -1.2
SCS7YMR272C RPT3P33298 428 aaKnown RBP7.57□□□□□ -1.2
SCS7YMR272C MOT2P34909 587 aaKnown RBP7.57□□□□□ -1.2
SCS7YMR272C MCD4P36051 919 aa7.57□□□□□ -1.2
SCS7YMR272C UTP7P40055 554 aaKnown RBP7.57□□□□□ -1.2
SCS7YMR272C ATG1P53104 897 aa7.57□□□□□ -1.2
SCS7YMR272C YBL028CP38202 106 aa7.56□□□□□ -1.2
SCS7YMR272C BDP1P46678 594 aa7.56□□□□□ -1.2
SCS7YMR272C ECM16Q04217 1267 aaKnown RBP7.56□□□□□ -1.2
SCS7YMR272C YLR225CQ05948 407 aaKnown RBP7.56□□□□□ -1.2
SCS7YMR272C DUR1,2P32528 1835 aaKnown RBP7.56□□□□□ -1.2
SCS7YMR272C GLO3P38682 493 aaKnown RBP7.55□□□□□ -1.2
SCS7YMR272C OSH3P38713 996 aaKnown RBP7.55□□□□□ -1.2
SCS7YMR272C NMD2P38798 1089 aaKnown RBP7.55□□□□□ -1.2
SCS7YMR272C PES4P39684 611 aa7.55□□□□□ -1.2
SCS7YMR272C YIR042CP40586 236 aa7.55□□□□□ -1.2
SCS7YMR272C IOC3P43596 787 aa7.55□□□□□ -1.2
SCS7YMR272C YNL193WP53870 558 aa7.55□□□□□ -1.2
SCS7YMR272C PUF6Q04373 656 aaKnown RBP7.55□□□□□ -1.2
SCS7YMR272C FLO11P08640 1367 aa7.55□□□□□ -1.2
SCS7YMR272C PDR18P53756 1333 aa7.54□□□□□ -1.2
SCS7YMR272C ERG12P07277 443 aa7.54□□□□□ -1.2
SCS7YMR272C MPH3P0CE00 602 aa7.54□□□□□ -1.2
SCS7YMR272C PFK2P16862 959 aaKnown RBP RIP-Chip data7.54□□□□□ -1.2not detected
SCS7YMR272C ASH1P34233 588 aa7.54□□□□□ -1.2
SCS7YMR272C RRP8P38961 392 aaKnown RBP7.54□□□□□ -1.2
SCS7YMR272C HXT10P43581 546 aa7.54□□□□□ -1.2
SCS7YMR272C YGL242CP53066 181 aa7.54□□□□□ -1.2
SCS7YMR272C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.54□□□□□ -1.2not detected
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms