RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeastyeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PML39YML107C YBL113CQ7M4S9 792 aa6.66□□□□□ -1.34
PML39YML107C SHM1P37292 490 aaPredicted RBP6.65□□□□□ -1.34
PML39YML107C SBE2P42223 864 aaKnown RBP6.65□□□□□ -1.34
PML39YML107C CCT8P47079 568 aaKnown RBP6.65□□□□□ -1.34
PML39YML107C MRPL33P20084 86 aa6.64□□□□□ -1.35
PML39YML107C FPS1P23900 669 aa6.64□□□□□ -1.35
PML39YML107C SLD2P34252 453 aa6.64□□□□□ -1.35
PML39YML107C GRS1P38088 690 aaKnown RBP6.64□□□□□ -1.35
PML39YML107C SSF1P38789 453 aaPredicted RBP6.64□□□□□ -1.35
PML39YML107C TDA6Q06466 467 aa6.64□□□□□ -1.35
PML39YML107C PDC6P26263 563 aaKnown RBP6.63□□□□□ -1.35
PML39YML107C ERP5P38819 212 aa6.63□□□□□ -1.35
PML39YML107C QDR1P40475 563 aa6.63□□□□□ -1.35
PML39YML107C MTO1P53070 669 aa6.63□□□□□ -1.35
PML39YML107C ATG1P53104 897 aa6.63□□□□□ -1.35
PML39YML107C YNR014WP53719 212 aa6.63□□□□□ -1.35
PML39YML107C YMR187CQ03236 431 aa6.63□□□□□ -1.35
PML39YML107C RPS31P05759 152 aaKnown RBP6.62□□□□□ -1.35
PML39YML107C PSH1Q12161 406 aa6.62□□□□□ -1.35
PML39YML107C LSO1Q3E827 93 aa6.62□□□□□ -1.35
PML39YML107C VMA3P25515 160 aa6.61□□□□□ -1.35
PML39YML107C MRPL16P38064 232 aa6.61□□□□□ -1.35
PML39YML107C LDH1P38139 375 aa6.61□□□□□ -1.35
PML39YML107C QDR2P40474 542 aa6.61□□□□□ -1.35
PML39YML107C SBP1P10080 294 aaKnown RBP6.6□□□□□ -1.35
PML39YML107C DYS1P38791 387 aa6.6□□□□□ -1.35
PML39YML107C SUT1P53032 299 aaKnown RBP6.6□□□□□ -1.35
PML39YML107C KAP122P32767 1081 aa6.59□□□□□ -1.35
PML39YML107C STM1P39015 273 aaKnown RBP6.59□□□□□ -1.35
PML39YML107C SPR3P41901 512 aa6.59□□□□□ -1.35
PML39YML107C GPM1P00950 247 aaKnown RBP6.58□□□□□ -1.36
PML39YML107C BOI1P38041 980 aaKnown RBP6.58□□□□□ -1.36
PML39YML107C FIR1P40020 876 aa6.58□□□□□ -1.36
PML39YML107C ACF4P47129 309 aa6.58□□□□□ -1.36
PML39YML107C STB3Q12427 513 aa6.58□□□□□ -1.36
PML39YML107C RPP1AP05318 106 aaPredicted RBP6.57□□□□□ -1.36
PML39YML107C LEU1P07264 779 aaKnown RBP6.57□□□□□ -1.36
PML39YML107C TRL1P09880 827 aaKnown RBP6.57□□□□□ -1.36
PML39YML107C SKN7P38889 622 aa6.57□□□□□ -1.36
PML39YML107C BOI2P39969 1040 aa6.57□□□□□ -1.36
PML39YML107C NRD1P53617 575 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
PML39YML107C RPB10P22139 70 aa6.56□□□□□ -1.36
PML39YML107C HXT8P40886 569 aa6.56□□□□□ -1.36
PML39YML107C ALD2P47771 506 aa6.56□□□□□ -1.36
PML39YML107C APC11Q12157 165 aa6.56□□□□□ -1.36
PML39YML107C RGP1P16664 663 aa6.55□□□□□ -1.36
PML39YML107C MCX1P38323 520 aaPredicted RBP6.55□□□□□ -1.36
PML39YML107C YBR287WP38355 427 aa6.55□□□□□ -1.36
PML39YML107C YHL050CP38721 697 aa6.55□□□□□ -1.36
PML39YML107C YHR219WP38900 624 aa6.55□□□□□ -1.36
PML39YML107C MDJ2P42834 146 aa6.55□□□□□ -1.36
PML39YML107C NOP8Q08287 484 aaPredicted RBP6.55□□□□□ -1.36
PML39YML107C UFD2P54860 961 aa6.54□□□□□ -1.36
PML39YML107C CUS1Q02554 436 aaPredicted RBP6.54□□□□□ -1.36
PML39YML107C SEC20P28791 383 aa6.53□□□□□ -1.36
PML39YML107C SMC1P32908 1225 aa6.53□□□□□ -1.36
PML39YML107C MET1P36150 593 aa6.53□□□□□ -1.36
PML39YML107C ISW1P38144 1129 aa6.53□□□□□ -1.36
PML39YML107C RPC31P17890 251 aa6.52□□□□□ -1.37
PML39YML107C NCL1P38205 684 aaKnown RBP6.52□□□□□ -1.37
PML39YML107C GIP1P38229 639 aa6.52□□□□□ -1.37
PML39YML107C THI12P42883 340 aa6.52□□□□□ -1.37
PML39YML107C THI5P43534 340 aa6.52□□□□□ -1.37
PML39YML107C THI11P47183 340 aa6.52□□□□□ -1.37
PML39YML107C TRS120Q04183 1289 aa6.52□□□□□ -1.37
PML39YML107C THI13Q07748 340 aa6.52□□□□□ -1.37
PML39YML107C YOR296WQ08748 1289 aa6.52□□□□□ -1.37
PML39YML107C MSN1P22148 382 aa6.51□□□□□ -1.37
PML39YML107C PDC5P16467 563 aaKnown RBP6.5□□□□□ -1.37
PML39YML107C KNS1P32350 737 aaPredicted RBP6.5□□□□□ -1.37
PML39YML107C BSD2P38356 321 aa6.5□□□□□ -1.37
PML39YML107C APM2P38700 605 aa6.5□□□□□ -1.37
PML39YML107C RAD55P38953 406 aa6.5□□□□□ -1.37
PML39YML107C IPL1P38991 367 aa6.5□□□□□ -1.37
PML39YML107C SKP1P52286 194 aa6.5□□□□□ -1.37
PML39YML107C NUT2Q06213 157 aa6.5□□□□□ -1.37
PML39YML107C MSC6Q08818 692 aaKnown RBP6.5□□□□□ -1.37
PML39YML107C YCK2P23292 546 aaKnown RBP6.49□□□□□ -1.37
PML39YML107C SEN54Q02825 467 aaPredicted RBP6.49□□□□□ -1.37
PML39YML107C TY1A-DR2Q03964 440 aaKnown RBP6.49□□□□□ -1.37
PML39YML107C KTR2P33550 425 aa6.48□□□□□ -1.37
PML39YML107C FRT1Q99332 602 aa6.48□□□□□ -1.37
PML39YML107C SLN1P39928 1220 aaPredicted RBP6.47□□□□□ -1.37
PML39YML107C NTA1P40354 457 aa6.47□□□□□ -1.37
PML39YML107C YDR215CQ12240 137 aa6.47□□□□□ -1.37
PML39YML107C IRS4P36115 615 aaKnown RBP6.46□□□□□ -1.38
PML39YML107C TAT1P38085 619 aa6.46□□□□□ -1.38
PML39YML107C PPX1P38698 397 aa6.46□□□□□ -1.38
PML39YML107C AIM46P38885 310 aa6.46□□□□□ -1.38
PML39YML107C HEM3P28789 327 aa6.45□□□□□ -1.38
PML39YML107C NAB2P32505 525 aaKnown RBP RIP-Chip data6.45□□□□□ -1.38not detected
PML39YML107C PSY2P40164 858 aa6.45□□□□□ -1.38
PML39YML107C RGD2P43556 714 aa6.45□□□□□ -1.38
PML39YML107C YNL011CP53980 444 aa6.45□□□□□ -1.38
PML39YML107C HEH2Q03281 663 aa6.45□□□□□ -1.38
PML39YML107C ITC1P53125 1264 aa6.44□□□□□ -1.38
PML39YML107C YNR040WP53736 256 aa6.44□□□□□ -1.38
PML39YML107C TIF6Q12522 245 aaKnown RBP6.44□□□□□ -1.38
PML39YML107C GLT1Q12680 2145 aaKnown RBP6.44□□□□□ -1.38
PML39YML107C AMN1P38285 549 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms