RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeastyeast

Gene CTR3, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR3YLR411W YMR265CQ03508 461 aaKnown RBP7.92□□□□□ -1.14
CTR3YLR411W STB3Q12427 513 aa7.92□□□□□ -1.14
CTR3YLR411W LDH1P38139 375 aa7.91□□□□□ -1.14
CTR3YLR411W GLO3P38682 493 aaKnown RBP7.91□□□□□ -1.14
CTR3YLR411W DYS1P38791 387 aa7.91□□□□□ -1.14
CTR3YLR411W QDR1P40475 563 aa7.91□□□□□ -1.14
CTR3YLR411W KTR2P33550 425 aa7.9□□□□□ -1.14
CTR3YLR411W SPR3P41901 512 aa7.9□□□□□ -1.14
CTR3YLR411W SKP1P52286 194 aa7.9□□□□□ -1.14
CTR3YLR411W RPB10P22139 70 aa7.89□□□□□ -1.15
CTR3YLR411W MDJ2P42834 146 aa7.88□□□□□ -1.15
CTR3YLR411W ACF4P47129 309 aa7.88□□□□□ -1.15
CTR3YLR411W SUT1P53032 299 aaKnown RBP7.88□□□□□ -1.15
CTR3YLR411W KRE33P53914 1056 aaKnown RBP7.88□□□□□ -1.15
CTR3YLR411W CUS1Q02554 436 aaPredicted RBP7.88□□□□□ -1.15
CTR3YLR411W GRS1P38088 690 aaKnown RBP7.87□□□□□ -1.15
CTR3YLR411W HXT8P40886 569 aa7.87□□□□□ -1.15
CTR3YLR411W YML020WQ03722 664 aa7.87□□□□□ -1.15
CTR3YLR411W YDR461C-AQ2V2P7 80 aa7.87□□□□□ -1.15
CTR3YLR411W NAB2P32505 525 aaKnown RBP RIP-Chip data7.86□□□□□ -1.15not detected
CTR3YLR411W CEM1P39525 442 aa7.86□□□□□ -1.15
CTR3YLR411W YOR296WQ08748 1289 aa7.86□□□□□ -1.15
CTR3YLR411W RPP1AP05318 106 aaPredicted RBP7.85□□□□□ -1.15
CTR3YLR411W MSN1P22148 382 aa7.85□□□□□ -1.15
CTR3YLR411W ADE12P80210 433 aaKnown RBP7.85□□□□□ -1.15
CTR3YLR411W SYT1Q06836 1226 aa7.85□□□□□ -1.15
CTR3YLR411W GIP1P38229 639 aa7.84□□□□□ -1.15
CTR3YLR411W BSD2P38356 321 aa7.84□□□□□ -1.15
CTR3YLR411W LYS5P50113 272 aa7.84□□□□□ -1.15
CTR3YLR411W YPL062WQ02781 134 aa7.84□□□□□ -1.15
CTR3YLR411W NOP8Q08287 484 aaPredicted RBP7.84□□□□□ -1.15
CTR3YLR411W FPS1P23900 669 aa7.83□□□□□ -1.16
CTR3YLR411W APM2P38700 605 aa7.83□□□□□ -1.16
CTR3YLR411W YNR040WP53736 256 aa7.83□□□□□ -1.16
CTR3YLR411W HPF1Q05164 967 aa7.83□□□□□ -1.16
CTR3YLR411W TY1B-DR4Q07793 1604 aa7.82□□□□□ -1.16
CTR3YLR411W ISW1P38144 1129 aa7.82□□□□□ -1.16
CTR3YLR411W SMC1P32908 1225 aa7.81□□□□□ -1.16
CTR3YLR411W NCL1P38205 684 aaKnown RBP7.81□□□□□ -1.16
CTR3YLR411W MSC7P38694 644 aa7.81□□□□□ -1.16
CTR3YLR411W FIR1P40020 876 aa7.81□□□□□ -1.16
CTR3YLR411W RGD2P43556 714 aa7.81□□□□□ -1.16
CTR3YLR411W ITC1P53125 1264 aa7.81□□□□□ -1.16
CTR3YLR411W YGR035CP53222 116 aa7.81□□□□□ -1.16
CTR3YLR411W STM1P39015 273 aaKnown RBP7.8□□□□□ -1.16
CTR3YLR411W JJJ3P47138 172 aa7.8□□□□□ -1.16
CTR3YLR411W UFD2P54860 961 aa7.8□□□□□ -1.16
CTR3YLR411W HEH2Q03281 663 aa7.8□□□□□ -1.16
CTR3YLR411W TRS120Q04183 1289 aa7.8□□□□□ -1.16
CTR3YLR411W NUT2Q06213 157 aa7.8□□□□□ -1.16
CTR3YLR411W YHL050CP38721 697 aa7.79□□□□□ -1.16
CTR3YLR411W YHR219WP38900 624 aa7.79□□□□□ -1.16
CTR3YLR411W NTA1P40354 457 aa7.79□□□□□ -1.16
CTR3YLR411W TY1A-DR2Q03964 440 aaKnown RBP7.79□□□□□ -1.16
CTR3YLR411W DPH6Q12429 685 aa7.79□□□□□ -1.16
CTR3YLR411W FRT1Q99332 602 aa7.79□□□□□ -1.16
CTR3YLR411W SKI3P17883 1432 aaKnown RBP7.78□□□□□ -1.16
CTR3YLR411W YBR287WP38355 427 aa7.78□□□□□ -1.16
CTR3YLR411W RAD55P38953 406 aa7.78□□□□□ -1.16
CTR3YLR411W SEN54Q02825 467 aaPredicted RBP7.78□□□□□ -1.16
CTR3YLR411W MNL2Q12205 849 aa7.77□□□□□ -1.17
CTR3YLR411W SLD2P34252 453 aa7.76□□□□□ -1.17
CTR3YLR411W YIL165CP40446 119 aa7.76□□□□□ -1.17
CTR3YLR411W MSC6Q08818 692 aaKnown RBP7.76□□□□□ -1.17
CTR3YLR411W TIF6Q12522 245 aaKnown RBP7.76□□□□□ -1.17
CTR3YLR411W HSL1P34244 1518 aa7.75□□□□□ -1.17
CTR3YLR411W IRS4P36115 615 aaKnown RBP7.75□□□□□ -1.17
CTR3YLR411W YER156CP40093 338 aaKnown RBP7.75□□□□□ -1.17
CTR3YLR411W EMG1Q06287 252 aaKnown RBP7.75□□□□□ -1.17
CTR3YLR411W PSY2P40164 858 aa7.74□□□□□ -1.17
CTR3YLR411W IDI1P15496 288 aa7.73□□□□□ -1.17
CTR3YLR411W PPX1P38698 397 aa7.73□□□□□ -1.17
CTR3YLR411W AIM46P38885 310 aa7.73□□□□□ -1.17
CTR3YLR411W PRK1P40494 810 aa7.73□□□□□ -1.17
CTR3YLR411W RSC4Q02206 625 aa7.73□□□□□ -1.17
CTR3YLR411W GPI13Q07830 1017 aa7.73□□□□□ -1.17
CTR3YLR411W SPT6P23615 1451 aaKnown RBP7.73□□□□□ -1.17
CTR3YLR411W SEC20P28791 383 aa7.72□□□□□ -1.17
CTR3YLR411W YNL011CP53980 444 aa7.72□□□□□ -1.17
CTR3YLR411W GPM1P00950 247 aaKnown RBP7.71□□□□□ -1.18
CTR3YLR411W TRK2P28584 889 aa7.71□□□□□ -1.18
CTR3YLR411W IPL1P38991 367 aa7.71□□□□□ -1.18
CTR3YLR411W CDC55Q00362 526 aa7.7□□□□□ -1.18
CTR3YLR411W PDC5P16467 563 aaKnown RBP7.69□□□□□ -1.18
CTR3YLR411W KNS1P32350 737 aaPredicted RBP7.69□□□□□ -1.18
CTR3YLR411W RSC2Q06488 889 aa7.69□□□□□ -1.18
CTR3YLR411W PPT1P53043 513 aa7.68□□□□□ -1.18
CTR3YLR411W WHI5Q12416 295 aa7.68□□□□□ -1.18
CTR3YLR411W MRP10O75012 95 aa7.67□□□□□ -1.18
CTR3YLR411W MET4P32389 672 aa7.66□□□□□ -1.18
CTR3YLR411W CHD1P32657 1468 aa7.66□□□□□ -1.18
CTR3YLR411W CTR9P89105 1077 aa7.65□□□□□ -1.18
CTR3YLR411W BSC2Q05611 235 aa7.65□□□□□ -1.18
CTR3YLR411W THI12P42883 340 aa7.64□□□□□ -1.19
CTR3YLR411W THI5P43534 340 aa7.64□□□□□ -1.19
CTR3YLR411W THI11P47183 340 aa7.64□□□□□ -1.19
CTR3YLR411W THI13Q07748 340 aa7.64□□□□□ -1.19
CTR3YLR411W PYC2P32327 1180 aaKnown RBP7.63□□□□□ -1.19
CTR3YLR411W YJL181WP46987 611 aa7.63□□□□□ -1.19
CTR3YLR411W PHO4P07270 312 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms