RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOS1	YKL205W	RIX7	Q07844	837 aa	Known RBP	4.7	□□□□□ -1.66
LOS1	YKL205W	ISW2	Q08773	1120 aa		4.7	□□□□□ -1.66
LOS1	YKL205W	CLF1	Q12309	687 aa	Predicted RBP	4.7	□□□□□ -1.66
LOS1	YKL205W	MCM3	P24279	971 aa	Known RBP	4.7	□□□□□ -1.66
LOS1	YKL205W	FPR3	P38911	411 aa	Known RBP	4.7	□□□□□ -1.66
LOS1	YKL205W	NCB2	Q92317	146 aa		4.7	□□□□□ -1.66
LOS1	YKL205W	ARG82	P07250	355 aa		4.69	□□□□□ -1.66
LOS1	YKL205W	MGM1	P32266	881 aa		4.69	□□□□□ -1.66
LOS1	YKL205W	SPO1	P53541	631 aa		4.69	□□□□□ -1.66
LOS1	YKL205W	YPL150W	Q12152	901 aa		4.69	□□□□□ -1.66
LOS1	YKL205W	CBP3	P21560	335 aa		4.69	□□□□□ -1.66
LOS1	YKL205W	GLC3	P32775	704 aa		4.69	□□□□□ -1.66
LOS1	YKL205W	MYO3	P36006	1272 aa		4.69	□□□□□ -1.66
LOS1	YKL205W	CRG1	P38892	291 aa	RIP-Chip data	4.69	□□□□□ -1.66	RIP-Chip
LOS1	YKL205W	ATG32	P40458	529 aa		4.69	□□□□□ -1.66
LOS1	YKL205W	YLR407W	Q06070	228 aa		4.69	□□□□□ -1.66
LOS1	YKL205W	NOP8	Q08287	484 aa	Predicted RBP	4.69	□□□□□ -1.66
LOS1	YKL205W	PCL8	Q08966	492 aa		4.69	□□□□□ -1.66
LOS1	YKL205W	SSF2	Q12153	453 aa	Predicted RBP	4.69	□□□□□ -1.66
LOS1	YKL205W	MPH3	P0CE00	602 aa		4.69	□□□□□ -1.66
LOS1	YKL205W	MRPS35	P53292	345 aa		4.69	□□□□□ -1.66
LOS1	YKL205W	FCP1	Q03254	732 aa		4.69	□□□□□ -1.66
LOS1	YKL205W	TRL1	P09880	827 aa	Known RBP	4.68	□□□□□ -1.66
LOS1	YKL205W	SMY1	P32364	656 aa	Known RBP	4.68	□□□□□ -1.66
LOS1	YKL205W	ELM1	P32801	640 aa		4.68	□□□□□ -1.66
LOS1	YKL205W	PUF6	Q04373	656 aa	Known RBP	4.68	□□□□□ -1.66
LOS1	YKL205W	DPL1	Q05567	589 aa		4.68	□□□□□ -1.66
LOS1	YKL205W	ATG20	Q07528	640 aa		4.68	□□□□□ -1.66
LOS1	YKL205W	FLO11	P08640	1367 aa		4.68	□□□□□ -1.66
LOS1	YKL205W	DIT2	P21595	489 aa		4.68	□□□□□ -1.66
LOS1	YKL205W	HAP5	Q02516	242 aa		4.67	□□□□□ -1.66
LOS1	YKL205W	TPM1	P17536	199 aa	Known RBP	4.67	□□□□□ -1.66
LOS1	YKL205W	HXT10	P43581	546 aa		4.67	□□□□□ -1.66
LOS1	YKL205W	YFH7	P43591	353 aa		4.67	□□□□□ -1.66
LOS1	YKL205W	YGR122W	P53272	402 aa		4.67	□□□□□ -1.66
LOS1	YKL205W	KRE33	P53914	1056 aa	Known RBP	4.67	□□□□□ -1.66
LOS1	YKL205W	SNU66	Q12420	587 aa	Predicted RBP	4.67	□□□□□ -1.66
LOS1	YKL205W	BDH2	P39713	417 aa		4.67	□□□□□ -1.66
LOS1	YKL205W	YER156C	P40093	338 aa	Known RBP	4.67	□□□□□ -1.66
LOS1	YKL205W	PTK2	P47116	818 aa	Known RBP	4.67	□□□□□ -1.66
LOS1	YKL205W	PSK2	Q08217	1101 aa		4.67	□□□□□ -1.66
LOS1	YKL205W	RIM20	Q12033	661 aa		4.67	□□□□□ -1.66
LOS1	YKL205W	MSN5	P52918	1224 aa		4.66	□□□□□ -1.66
LOS1	YKL205W	THI3	Q07471	609 aa		4.66	□□□□□ -1.66
LOS1	YKL205W	MATALPHA2	P0CY08	210 aa		4.66	□□□□□ -1.66
LOS1	YKL205W	HMLALPHA2	P0CY09	210 aa		4.66	□□□□□ -1.66
LOS1	YKL205W	CRF1	Q04930	467 aa		4.66	□□□□□ -1.66
LOS1	YKL205W	PPM2	Q08282	695 aa		4.66	□□□□□ -1.66
LOS1	YKL205W	MOT1	P32333	1867 aa		4.65	□□□□□ -1.66
LOS1	YKL205W	KIN1	P13185	1064 aa		4.65	□□□□□ -1.66
LOS1	YKL205W	RET1	P22276	1149 aa	Known RBP	4.65	□□□□□ -1.66
LOS1	YKL205W	SER1	P33330	395 aa	Known RBP	4.65	□□□□□ -1.66
LOS1	YKL205W	YHL017W	P38745	532 aa		4.65	□□□□□ -1.66
LOS1	YKL205W	MTC3	P53077	123 aa		4.65	□□□□□ -1.66
LOS1	YKL205W	IRC4	Q03036	179 aa		4.65	□□□□□ -1.66
LOS1	YKL205W	MYO5	Q04439	1219 aa	Known RBP	4.65	□□□□□ -1.66
LOS1	YKL205W	RTS1	P38903	757 aa		4.65	□□□□□ -1.67
LOS1	YKL205W	TIF4631	P39935	952 aa	Known RBP	4.65	□□□□□ -1.67
LOS1	YKL205W	YGL082W	P53155	381 aa		4.65	□□□□□ -1.67
LOS1	YKL205W	UBP10	P53874	792 aa	Predicted RBP	4.65	□□□□□ -1.67
LOS1	YKL205W	PRP42	Q03776	544 aa	Known RBP	4.65	□□□□□ -1.67
LOS1	YKL205W	GUD1	Q07729	489 aa		4.65	□□□□□ -1.67
LOS1	YKL205W	SEC20	P28791	383 aa		4.64	□□□□□ -1.67
LOS1	YKL205W	SNF7	P39929	240 aa	Known RBP	4.64	□□□□□ -1.67
LOS1	YKL205W	APL6	P46682	809 aa		4.64	□□□□□ -1.67
LOS1	YKL205W	DLD1	P32891	587 aa		4.64	□□□□□ -1.67
LOS1	YKL205W	MET1	P36150	593 aa		4.64	□□□□□ -1.67
LOS1	YKL205W	NMD2	P38798	1089 aa	Known RBP	4.64	□□□□□ -1.67
LOS1	YKL205W	EAF6	P47128	113 aa		4.64	□□□□□ -1.67
LOS1	YKL205W	PIL1	P53252	339 aa	Known RBP	4.64	□□□□□ -1.67
LOS1	YKL205W	SPN1	Q06505	410 aa	Predicted RBP	4.64	□□□□□ -1.67
LOS1	YKL205W	RAD61	Q99359	647 aa		4.64	□□□□□ -1.67
LOS1	YKL205W	SPB4	P25808	606 aa	Predicted RBP	4.63	□□□□□ -1.67
LOS1	YKL205W	SET4	P42948	560 aa		4.63	□□□□□ -1.67
LOS1	YKL205W	RPN7	Q06103	429 aa	Known RBP	4.63	□□□□□ -1.67
LOS1	YKL205W	RRG1	Q12167	365 aa	Predicted RBP	4.63	□□□□□ -1.67
LOS1	YKL205W	RTG2	P32608	588 aa	Known RBP	4.63	□□□□□ -1.67
LOS1	YKL205W	YGR117C	P53270	476 aa		4.63	□□□□□ -1.67
LOS1	YKL205W	SRC1	Q03707	834 aa		4.63	□□□□□ -1.67
LOS1	YKL205W	RNR2	P09938	399 aa	Known RBP	4.62	□□□□□ -1.67
LOS1	YKL205W	SWC3	P31376	625 aa		4.62	□□□□□ -1.67
LOS1	YKL205W	YKU70	P32807	602 aa		4.62	□□□□□ -1.67
LOS1	YKL205W	VPS64	Q03944	604 aa		4.62	□□□□□ -1.67
LOS1	YKL205W	YHL050C	P38721	697 aa		4.62	□□□□□ -1.67
LOS1	YKL205W	TIM50	Q02776	476 aa		4.62	□□□□□ -1.67
LOS1	YKL205W	PUS5	Q06244	254 aa		4.62	□□□□□ -1.67
LOS1	YKL205W	TOS4	Q06266	489 aa		4.62	□□□□□ -1.67
LOS1	YKL205W	CSR2	Q12734	1121 aa		4.62	□□□□□ -1.67
LOS1	YKL205W	THI6	P41835	540 aa		4.62	□□□□□ -1.67
LOS1	YKL205W	YNL193W	P53870	558 aa		4.62	□□□□□ -1.67
LOS1	YKL205W	FRD1	P32614	470 aa	Known RBP	4.61	□□□□□ -1.67
LOS1	YKL205W	BOI1	P38041	980 aa	Known RBP	4.61	□□□□□ -1.67
LOS1	YKL205W	BRN1	P38170	754 aa		4.61	□□□□□ -1.67
LOS1	YKL205W	TOM71	P38825	639 aa	Known RBP	4.61	□□□□□ -1.67
LOS1	YKL205W	RPS15	Q01855	142 aa	Known RBP	4.61	□□□□□ -1.67
LOS1	YKL205W	RPC31	P17890	251 aa		4.61	□□□□□ -1.67
LOS1	YKL205W	IME2	P32581	645 aa		4.61	□□□□□ -1.67
LOS1	YKL205W	IRC8	P47046	822 aa		4.61	□□□□□ -1.67
LOS1	YKL205W	SNU71	P53207	620 aa	Known RBP	4.61	□□□□□ -1.67
LOS1	YKL205W	HPC2	Q01448	625 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms