RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeastyeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT1YJR001W MTC5Q03897 1148 aa5.18□□□□□ -1.58
AVT1YJR001W PUF6Q04373 656 aaKnown RBP5.18□□□□□ -1.58
AVT1YJR001W ESF1Q06344 628 aaKnown RBP5.18□□□□□ -1.58
AVT1YJR001W SPP41P38904 1435 aa5.18□□□□□ -1.58
AVT1YJR001W MCM1P11746 286 aa5.18□□□□□ -1.58
AVT1YJR001W RGR1P19263 1082 aa5.18□□□□□ -1.58
AVT1YJR001W PKH1Q03407 766 aa5.18□□□□□ -1.58
AVT1YJR001W RMD1Q03441 430 aa5.18□□□□□ -1.58
AVT1YJR001W SPO20Q04359 397 aa5.18□□□□□ -1.58
AVT1YJR001W YDR341CQ05506 607 aaKnown RBP5.18□□□□□ -1.58
AVT1YJR001W PNP1Q05788 311 aa5.18□□□□□ -1.58
AVT1YJR001W MLP2P40457 1679 aa5.17□□□□□ -1.58
AVT1YJR001W RAD4P14736 754 aa5.17□□□□□ -1.58
AVT1YJR001W MIP1P15801 1254 aa5.17□□□□□ -1.58
AVT1YJR001W ARG8P18544 423 aa5.17□□□□□ -1.58
AVT1YJR001W PCS60P38137 543 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58 RIP-Chip
AVT1YJR001W RSC30P38781 883 aa5.17□□□□□ -1.58
AVT1YJR001W IES5P40060 125 aa5.17□□□□□ -1.58
AVT1YJR001W SEC9P40357 651 aa5.17□□□□□ -1.58
AVT1YJR001W QDR1P40475 563 aa5.17□□□□□ -1.58
AVT1YJR001W YJL171CP46992 396 aa5.17□□□□□ -1.58
AVT1YJR001W SYH1Q02875 849 aaKnown RBP5.17□□□□□ -1.58
AVT1YJR001W GDE1Q02979 1223 aa5.17□□□□□ -1.58
AVT1YJR001W RCF1Q03713 159 aa5.17□□□□□ -1.58
AVT1YJR001W STH1P32597 1359 aa5.16□□□□□ -1.58
AVT1YJR001W TY4B-PA0A0B7P3V8 1104 aa5.16□□□□□ -1.58
AVT1YJR001W SRM1P21827 482 aa5.16□□□□□ -1.58
AVT1YJR001W GRX1P25373 110 aaKnown RBP5.16□□□□□ -1.58
AVT1YJR001W DJP1P40564 432 aa5.16□□□□□ -1.58
AVT1YJR001W MTR4P47047 1073 aaKnown RBP5.16□□□□□ -1.58
AVT1YJR001W YMR1P47147 688 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
AVT1YJR001W YNR029CP53729 429 aaKnown RBP5.16□□□□□ -1.58
AVT1YJR001W NST1P53935 1240 aa5.16□□□□□ -1.58
AVT1YJR001W SLX4Q12098 748 aa5.16□□□□□ -1.58
AVT1YJR001W TY4A-HQ6Q5P6 413 aa5.16□□□□□ -1.58
AVT1YJR001W PAN1P32521 1480 aa5.16□□□□□ -1.58
AVT1YJR001W CLB5P30283 435 aa5.16□□□□□ -1.58
AVT1YJR001W SNF7P39929 240 aaKnown RBP5.16□□□□□ -1.58
AVT1YJR001W VID27P40157 782 aa5.16□□□□□ -1.58
AVT1YJR001W YPP1P46951 817 aa5.16□□□□□ -1.58
AVT1YJR001W NNF2P53253 936 aa5.16□□□□□ -1.58
AVT1YJR001W MDM1Q01846 1127 aa5.16□□□□□ -1.58
AVT1YJR001W APL5Q08951 932 aaKnown RBP5.16□□□□□ -1.58
AVT1YJR001W VTH1P40438 1549 aa5.15□□□□□ -1.58
AVT1YJR001W VTH2P40890 1549 aa5.15□□□□□ -1.58
AVT1YJR001W PHO8P11491 566 aa5.15□□□□□ -1.59
AVT1YJR001W TIM23P32897 222 aa5.15□□□□□ -1.59
AVT1YJR001W NMD3P38861 518 aaKnown RBP5.15□□□□□ -1.59
AVT1YJR001W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
AVT1YJR001W ETT1Q08421 412 aaKnown RBP5.15□□□□□ -1.59
AVT1YJR001W ESC1Q03661 1658 aaKnown RBP5.14□□□□□ -1.59
AVT1YJR001W SRS2P12954 1174 aa5.14□□□□□ -1.59
AVT1YJR001W MUM2P38236 366 aa5.14□□□□□ -1.59
AVT1YJR001W SEC27P41811 889 aaKnown RBP5.14□□□□□ -1.59
AVT1YJR001W NOP14Q99207 810 aaKnown RBP5.14□□□□□ -1.59
AVT1YJR001W PDR15Q04182 1529 aaKnown RBP5.14□□□□□ -1.59
AVT1YJR001W TSC11P40061 1430 aa5.14□□□□□ -1.59
AVT1YJR001W ULS1Q08562 1619 aa5.14□□□□□ -1.59
AVT1YJR001W FUR4P05316 633 aaKnown RBP5.13□□□□□ -1.59
AVT1YJR001W PHO4P07270 312 aaKnown RBP5.13□□□□□ -1.59
AVT1YJR001W PIF1P07271 859 aa5.13□□□□□ -1.59
AVT1YJR001W HAP4P14064 554 aa5.13□□□□□ -1.59
AVT1YJR001W VMA1P17255 1071 aaKnown RBP5.13□□□□□ -1.59
AVT1YJR001W RAD54P32863 898 aa5.13□□□□□ -1.59
AVT1YJR001W GPI13Q07830 1017 aa5.13□□□□□ -1.59
AVT1YJR001W VPS5Q92331 675 aa5.13□□□□□ -1.59
AVT1YJR001W TY1B-JR2P47100 1755 aaKnown RBP5.13□□□□□ -1.59
AVT1YJR001W TY1B-ER2Q03619 1755 aa5.13□□□□□ -1.59
AVT1YJR001W TY1B-MR1Q04214 1755 aa5.13□□□□□ -1.59
AVT1YJR001W TY1B-MR2Q04670 1755 aaKnown RBP5.13□□□□□ -1.59
AVT1YJR001W TY1B-LR1Q12088 1755 aaKnown RBP5.13□□□□□ -1.59
AVT1YJR001W TY1B-NL1Q12112 1755 aa5.13□□□□□ -1.59
AVT1YJR001W TY1B-GR1Q12141 1755 aa5.13□□□□□ -1.59
AVT1YJR001W TY1B-BLQ12490 1755 aa5.13□□□□□ -1.59
AVT1YJR001W ATP4P05626 244 aa5.13□□□□□ -1.59
AVT1YJR001W MPH2P0CD99 609 aa5.13□□□□□ -1.59
AVT1YJR001W MPH3P0CE00 602 aa5.13□□□□□ -1.59
AVT1YJR001W RAD51P25454 400 aa5.13□□□□□ -1.59
AVT1YJR001W RPT1P33299 467 aaKnown RBP5.13□□□□□ -1.59
AVT1YJR001W MTC2P34246 357 aa5.13□□□□□ -1.59
AVT1YJR001W MVP1P40959 511 aaKnown RBP5.13□□□□□ -1.59
AVT1YJR001W TAF1P46677 1066 aa5.13□□□□□ -1.59
AVT1YJR001W YLR125WQ12138 136 aa5.13□□□□□ -1.59
AVT1YJR001W RRI2Q12348 645 aa5.13□□□□□ -1.59
AVT1YJR001W TRM732Q03496 1420 aa5.13□□□□□ -1.59
AVT1YJR001W FOB1O13329 566 aa5.12□□□□□ -1.59
AVT1YJR001W DBP1P24784 617 aaKnown RBP5.12□□□□□ -1.59
AVT1YJR001W SWI3P32591 825 aa5.12□□□□□ -1.59
AVT1YJR001W MNR2P35724 969 aa5.12□□□□□ -1.59
AVT1YJR001W CHZ1P40019 153 aaPredicted RBP5.12□□□□□ -1.59
AVT1YJR001W DAS1P47005 663 aa5.12□□□□□ -1.59
AVT1YJR001W YLR257WQ06146 321 aaKnown RBP5.12□□□□□ -1.59
AVT1YJR001W YOL036WQ08206 761 aa5.12□□□□□ -1.59
AVT1YJR001W CLF1Q12309 687 aaPredicted RBP5.12□□□□□ -1.59
AVT1YJR001W TY1B-AO13527 1196 aaKnown RBP5.11□□□□□ -1.59
AVT1YJR001W LEM3P42838 414 aa5.11□□□□□ -1.59
AVT1YJR001W MCM16Q12262 181 aa5.11□□□□□ -1.59
AVT1YJR001W TMA7Q3E764 64 aaKnown RBP5.11□□□□□ -1.59
AVT1YJR001W DNF1P32660 1571 aa5.11□□□□□ -1.59
AVT1YJR001W RPA190P10964 1664 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 66.3 ms