RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C MAK21Q12176 1025 aaKnown RBP4.45□□□□□ -1.7
VPS53YJL029C ICL1P28240 557 aaPredicted RBP4.44□□□□□ -1.7
VPS53YJL029C SLI15P38283 698 aa4.44□□□□□ -1.7
VPS53YJL029C HGH1P48362 394 aaKnown RBP4.44□□□□□ -1.7
VPS53YJL029C TIM50Q02776 476 aa4.44□□□□□ -1.7
VPS53YJL029C CRF1Q04930 467 aa4.44□□□□□ -1.7
VPS53YJL029C SAM3Q08986 587 aa4.44□□□□□ -1.7
VPS53YJL029C FRD1P32614 470 aaKnown RBP4.44□□□□□ -1.7
VPS53YJL029C DCW1P36091 449 aa4.44□□□□□ -1.7
VPS53YJL029C STS1P38637 319 aa4.44□□□□□ -1.7
VPS53YJL029C NUG1P40010 520 aaKnown RBP4.44□□□□□ -1.7
VPS53YJL029C YPP1P46951 817 aa4.44□□□□□ -1.7
VPS53YJL029C ZDS2P54786 942 aa4.43□□□□□ -1.7
VPS53YJL029C PKH1Q03407 766 aa4.43□□□□□ -1.7
VPS53YJL029C POM152P39685 1337 aa4.43□□□□□ -1.7
VPS53YJL029C KRE2P27809 442 aa4.43□□□□□ -1.7
VPS53YJL029C RAM2P29703 316 aa4.43□□□□□ -1.7
VPS53YJL029C ICP55P40051 511 aa4.43□□□□□ -1.7
VPS53YJL029C DMA2P53924 522 aa4.43□□□□□ -1.7
VPS53YJL029C DUR1,2P32528 1835 aaKnown RBP4.42□□□□□ -1.7
VPS53YJL029C TOP1P04786 769 aa4.42□□□□□ -1.7
VPS53YJL029C SAP30P38429 201 aa4.42□□□□□ -1.7
VPS53YJL029C ITC1P53125 1264 aa4.42□□□□□ -1.7
VPS53YJL029C NUP133P36161 1157 aa4.41□□□□□ -1.7
VPS53YJL029C RPS19AP07280 144 aaKnown RBP4.41□□□□□ -1.7
VPS53YJL029C RPS19BP07281 144 aaPredicted RBP4.41□□□□□ -1.7
VPS53YJL029C SUI2P20459 304 aaKnown RBP4.41□□□□□ -1.7
VPS53YJL029C RRD1P40454 393 aaKnown RBP4.41□□□□□ -1.7
VPS53YJL029C NOP8Q08287 484 aaPredicted RBP4.41□□□□□ -1.7
VPS53YJL029C PSH1Q12161 406 aa4.41□□□□□ -1.7
VPS53YJL029C RRG1Q12167 365 aaPredicted RBP4.41□□□□□ -1.7
VPS53YJL029C ADR1P07248 1323 aa4.41□□□□□ -1.7
VPS53YJL029C DAL5P15365 543 aa4.4□□□□□ -1.7
VPS53YJL029C YBR287WP38355 427 aa4.4□□□□□ -1.7
VPS53YJL029C UBP12P39538 1254 aa4.4□□□□□ -1.7
VPS53YJL029C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.4□□□□□ -1.7not detected
VPS53YJL029C THS1P04801 734 aaKnown RBP4.4□□□□□ -1.71
VPS53YJL029C EMP47P43555 445 aa4.4□□□□□ -1.71
VPS53YJL029C YGR117CP53270 476 aa4.4□□□□□ -1.71
VPS53YJL029C YDL129WQ07555 291 aa4.4□□□□□ -1.71
VPS53YJL029C BOI2P39969 1040 aa4.39□□□□□ -1.71
VPS53YJL029C PEA2P40091 420 aa4.39□□□□□ -1.71
VPS53YJL029C YPR148CQ06523 435 aa4.39□□□□□ -1.71
VPS53YJL029C CAF20P12962 161 aaKnown RBP4.39□□□□□ -1.71
VPS53YJL029C SSF1P38789 453 aaPredicted RBP4.39□□□□□ -1.71
VPS53YJL029C FET4P40988 552 aa4.39□□□□□ -1.71
VPS53YJL029C ACK1Q07622 623 aaPredicted RBP4.39□□□□□ -1.71
VPS53YJL029C MGM1P32266 881 aa4.38□□□□□ -1.71
VPS53YJL029C FCP1Q03254 732 aa4.38□□□□□ -1.71
VPS53YJL029C SRC1Q03707 834 aa4.38□□□□□ -1.71
VPS53YJL029C PRP42Q03776 544 aaKnown RBP4.38□□□□□ -1.71
VPS53YJL029C SNU66Q12420 587 aaPredicted RBP4.38□□□□□ -1.71
VPS53YJL029C ETP1P38748 585 aaKnown RBP4.38□□□□□ -1.71
VPS53YJL029C SPL2P38839 148 aa4.38□□□□□ -1.71
VPS53YJL029C VHR2P40041 505 aa4.38□□□□□ -1.71
VPS53YJL029C YIL089WP40500 205 aa4.38□□□□□ -1.71
VPS53YJL029C GSC2P40989 1895 aa4.38□□□□□ -1.71
VPS53YJL029C RRT6P53117 311 aaPredicted RBP4.38□□□□□ -1.71
VPS53YJL029C CWC15Q03772 175 aaKnown RBP4.38□□□□□ -1.71
VPS53YJL029C SRF1Q12516 437 aa4.38□□□□□ -1.71
VPS53YJL029C BSD2P38356 321 aa4.37□□□□□ -1.71
VPS53YJL029C ATH1P48016 1211 aa4.37□□□□□ -1.71
VPS53YJL029C THI3Q07471 609 aa4.37□□□□□ -1.71
VPS53YJL029C PIF1P07271 859 aa4.37□□□□□ -1.71
VPS53YJL029C RAD24P32641 659 aa4.37□□□□□ -1.71
VPS53YJL029C NPL4P33755 580 aa4.37□□□□□ -1.71
VPS53YJL029C RPT4P53549 437 aaKnown RBP4.37□□□□□ -1.71
VPS53YJL029C ARG82P07250 355 aa4.36□□□□□ -1.71
VPS53YJL029C GCD7P32502 381 aaPredicted RBP4.36□□□□□ -1.71
VPS53YJL029C NGR1P32831 672 aaKnown RBP4.36□□□□□ -1.71
VPS53YJL029C WRS1Q12109 432 aaKnown RBP4.36□□□□□ -1.71
VPS53YJL029C CHL1P22516 861 aaPredicted RBP4.36□□□□□ -1.71
VPS53YJL029C LCB1P25045 558 aaKnown RBP4.36□□□□□ -1.71
VPS53YJL029C BCK2P33306 851 aa4.36□□□□□ -1.71
VPS53YJL029C GEF1P37020 779 aa4.36□□□□□ -1.71
VPS53YJL029C YEL023CP39992 682 aa4.36□□□□□ -1.71
VPS53YJL029C DUS1P53759 423 aaKnown RBP4.36□□□□□ -1.71
VPS53YJL029C TRM44Q02648 567 aaKnown RBP4.36□□□□□ -1.71
VPS53YJL029C CSI1Q04368 295 aa4.36□□□□□ -1.71
VPS53YJL029C AIM7Q12156 149 aa4.36□□□□□ -1.71
VPS53YJL029C GAL2P13181 574 aa4.35□□□□□ -1.71
VPS53YJL029C AFG2P32794 780 aa4.35□□□□□ -1.71
VPS53YJL029C PTC4P38089 393 aa4.35□□□□□ -1.71
VPS53YJL029C YIL092WP40497 633 aa4.35□□□□□ -1.71
VPS53YJL029C RVB2Q12464 471 aaKnown RBP4.35□□□□□ -1.71
VPS53YJL029C RAD2P07276 1031 aa4.35□□□□□ -1.71
VPS53YJL029C HVG1P0CE11 249 aa4.35□□□□□ -1.71
VPS53YJL029C JJJ2P46997 583 aa4.35□□□□□ -1.71
VPS53YJL029C ELP4Q02884 456 aaKnown RBP4.35□□□□□ -1.71
VPS53YJL029C IRC4Q03036 179 aa4.35□□□□□ -1.71
VPS53YJL029C GAS5Q08193 484 aa4.35□□□□□ -1.71
VPS53YJL029C HPR1P17629 752 aaKnown RBP4.34□□□□□ -1.71
VPS53YJL029C UTP7P40055 554 aaKnown RBP4.34□□□□□ -1.71
VPS53YJL029C PEX29Q03370 554 aa4.34□□□□□ -1.71
VPS53YJL029C TIF6Q12522 245 aaKnown RBP4.34□□□□□ -1.71
VPS53YJL029C CYB2P00175 591 aa4.34□□□□□ -1.72
VPS53YJL029C RSC30P38781 883 aa4.34□□□□□ -1.72
VPS53YJL029C YFH7P43591 353 aa4.34□□□□□ -1.72
VPS53YJL029C FLO11P08640 1367 aa4.33□□□□□ -1.72
VPS53YJL029C CSR2Q12734 1121 aa4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 69.6 ms