RNA–Protein interactions for RNA: YIL132C

CSM2, Transcript of Component of Shu complex (aka PCSS complex), yeast

Gene CSM2, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSM2	YIL132C	RPB10	P22139	70 aa		11.51	□□□□□ -0.57
CSM2	YIL132C	SPR3	P41901	512 aa		11.51	□□□□□ -0.57
CSM2	YIL132C	YDL176W	Q12027	708 aa		11.51	□□□□□ -0.57
CSM2	YIL132C	STB3	Q12427	513 aa		11.51	□□□□□ -0.57
CSM2	YIL132C	CCP1	P00431	361 aa		11.5	□□□□□ -0.57
CSM2	YIL132C	RPC31	P17890	251 aa		11.5	□□□□□ -0.57
CSM2	YIL132C	DIT1	P21623	536 aa		11.5	□□□□□ -0.57
CSM2	YIL132C	CUZ1	P53899	274 aa		11.5	□□□□□ -0.57
CSM2	YIL132C	KTR2	P33550	425 aa		11.49	□□□□□ -0.57
CSM2	YIL132C	SLD2	P34252	453 aa		11.49	□□□□□ -0.57
CSM2	YIL132C	STM1	P39015	273 aa	Known RBP	11.49	□□□□□ -0.57
CSM2	YIL132C	HXT8	P40886	569 aa		11.49	□□□□□ -0.57
CSM2	YIL132C	YMR265C	Q03508	461 aa	Known RBP	11.49	□□□□□ -0.57
CSM2	YIL132C	SKP1	P52286	194 aa		11.48	□□□□□ -0.57
CSM2	YIL132C	CUS1	Q02554	436 aa	Predicted RBP	11.47	□□□□□ -0.57
CSM2	YIL132C	MSN1	P22148	382 aa		11.45	□□□□□ -0.58
CSM2	YIL132C	YOR296W	Q08748	1289 aa		11.45	□□□□□ -0.58
CSM2	YIL132C	RPP1A	P05318	106 aa	Predicted RBP	11.44	□□□□□ -0.58
CSM2	YIL132C	KRE33	P53914	1056 aa	Known RBP	11.44	□□□□□ -0.58
CSM2	YIL132C	GIP1	P38229	639 aa		11.43	□□□□□ -0.58
CSM2	YIL132C	YHL050C	P38721	697 aa		11.43	□□□□□ -0.58
CSM2	YIL132C	YHR219W	P38900	624 aa		11.43	□□□□□ -0.58
CSM2	YIL132C	FIR1	P40020	876 aa		11.43	□□□□□ -0.58
CSM2	YIL132C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	11.42	□□□□□ -0.58	not detected
CSM2	YIL132C	SMC1	P32908	1225 aa		11.42	□□□□□ -0.58
CSM2	YIL132C	ISW1	P38144	1129 aa		11.42	□□□□□ -0.58
CSM2	YIL132C	UFD2	P54860	961 aa		11.42	□□□□□ -0.58
CSM2	YIL132C	SEN54	Q02825	467 aa	Predicted RBP	11.42	□□□□□ -0.58
CSM2	YIL132C	BSD2	P38356	321 aa		11.41	□□□□□ -0.58
CSM2	YIL132C	TRS120	Q04183	1289 aa		11.41	□□□□□ -0.58
CSM2	YIL132C	NUT2	Q06213	157 aa		11.41	□□□□□ -0.58
CSM2	YIL132C	YDR461C-A	Q2V2P7	80 aa		11.41	□□□□□ -0.58
CSM2	YIL132C	APM2	P38700	605 aa		11.4	□□□□□ -0.58
CSM2	YIL132C	CEM1	P39525	442 aa		11.4	□□□□□ -0.58
CSM2	YIL132C	YBR287W	P38355	427 aa		11.39	□□□□□ -0.59
CSM2	YIL132C	ADE12	P80210	433 aa	Known RBP	11.39	□□□□□ -0.59
CSM2	YIL132C	MSC6	Q08818	692 aa	Known RBP	11.39	□□□□□ -0.59
CSM2	YIL132C	FRT1	Q99332	602 aa		11.39	□□□□□ -0.59
CSM2	YIL132C	FPS1	P23900	669 aa		11.38	□□□□□ -0.59
CSM2	YIL132C	NCL1	P38205	684 aa	Known RBP	11.38	□□□□□ -0.59
CSM2	YIL132C	RGD2	P43556	714 aa		11.38	□□□□□ -0.59
CSM2	YIL132C	SEC20	P28791	383 aa		11.37	□□□□□ -0.59
CSM2	YIL132C	RAD55	P38953	406 aa		11.37	□□□□□ -0.59
CSM2	YIL132C	NTA1	P40354	457 aa		11.37	□□□□□ -0.59
CSM2	YIL132C	YNR040W	P53736	256 aa		11.37	□□□□□ -0.59
CSM2	YIL132C	SYT1	Q06836	1226 aa		11.37	□□□□□ -0.59
CSM2	YIL132C	ITC1	P53125	1264 aa		11.36	□□□□□ -0.59
CSM2	YIL132C	PPX1	P38698	397 aa		11.34	□□□□□ -0.59
CSM2	YIL132C	IPL1	P38991	367 aa		11.34	□□□□□ -0.59
CSM2	YIL132C	LYS5	P50113	272 aa		11.34	□□□□□ -0.59
CSM2	YIL132C	HEH2	Q03281	663 aa		11.34	□□□□□ -0.59
CSM2	YIL132C	MNL2	Q12205	849 aa		11.33	□□□□□ -0.6
CSM2	YIL132C	IRS4	P36115	615 aa	Known RBP	11.32	□□□□□ -0.6
CSM2	YIL132C	MSC7	P38694	644 aa		11.32	□□□□□ -0.6
CSM2	YIL132C	TIF6	Q12522	245 aa	Known RBP	11.31	□□□□□ -0.6
CSM2	YIL132C	PSY2	P40164	858 aa		11.3	□□□□□ -0.6
CSM2	YIL132C	YIL165C	P40446	119 aa		11.3	□□□□□ -0.6
CSM2	YIL132C	HPF1	Q05164	967 aa		11.3	□□□□□ -0.6
CSM2	YIL132C	AIM46	P38885	310 aa		11.29	□□□□□ -0.6
CSM2	YIL132C	YNL011C	P53980	444 aa		11.29	□□□□□ -0.6
CSM2	YIL132C	RSC4	Q02206	625 aa		11.29	□□□□□ -0.6
CSM2	YIL132C	TY1A-DR2	Q03964	440 aa	Known RBP	11.29	□□□□□ -0.6
CSM2	YIL132C	EMG1	Q06287	252 aa	Known RBP	11.29	□□□□□ -0.6
CSM2	YIL132C	YGR035C	P53222	116 aa		11.28	□□□□□ -0.6
CSM2	YIL132C	GPI13	Q07830	1017 aa		11.28	□□□□□ -0.6
CSM2	YIL132C	DPH6	Q12429	685 aa		11.27	□□□□□ -0.61
CSM2	YIL132C	HEM3	P28789	327 aa		11.26	□□□□□ -0.61
CSM2	YIL132C	YER156C	P40093	338 aa	Known RBP	11.26	□□□□□ -0.61
CSM2	YIL132C	JJJ3	P47138	172 aa		11.26	□□□□□ -0.61
CSM2	YIL132C	CDC55	Q00362	526 aa		11.26	□□□□□ -0.61
CSM2	YIL132C	WHI5	Q12416	295 aa		11.26	□□□□□ -0.61
CSM2	YIL132C	THI12	P42883	340 aa		11.25	□□□□□ -0.61
CSM2	YIL132C	THI5	P43534	340 aa		11.25	□□□□□ -0.61
CSM2	YIL132C	THI11	P47183	340 aa		11.25	□□□□□ -0.61
CSM2	YIL132C	YPL062W	Q02781	134 aa		11.25	□□□□□ -0.61
CSM2	YIL132C	THI13	Q07748	340 aa		11.25	□□□□□ -0.61
CSM2	YIL132C	IDI1	P15496	288 aa		11.24	□□□□□ -0.61
CSM2	YIL132C	PRK1	P40494	810 aa		11.22	□□□□□ -0.61
CSM2	YIL132C	RSC2	Q06488	889 aa		11.21	□□□□□ -0.61
CSM2	YIL132C	MET4	P32389	672 aa		11.2	□□□□□ -0.62
CSM2	YIL132C	BSC2	Q05611	235 aa		11.2	□□□□□ -0.62
CSM2	YIL132C	PPT1	P53043	513 aa		11.19	□□□□□ -0.62
CSM2	YIL132C	GPM1	P00950	247 aa	Known RBP	11.17	□□□□□ -0.62
CSM2	YIL132C	SAM37	P50110	327 aa		11.16	□□□□□ -0.62
CSM2	YIL132C	PHO4	P07270	312 aa	Known RBP	11.15	□□□□□ -0.62
CSM2	YIL132C	PDC5	P16467	563 aa	Known RBP	11.15	□□□□□ -0.62
CSM2	YIL132C	KNS1	P32350	737 aa	Predicted RBP	11.15	□□□□□ -0.62
CSM2	YIL132C	PYC2	P32327	1180 aa	Known RBP	11.13	□□□□□ -0.63
CSM2	YIL132C	YJL181W	P46987	611 aa		11.13	□□□□□ -0.63
CSM2	YIL132C	CTR9	P89105	1077 aa		11.13	□□□□□ -0.63
CSM2	YIL132C	NOC3	Q07896	663 aa	Predicted RBP	11.13	□□□□□ -0.63
CSM2	YIL132C	MRP10	O75012	95 aa		11.12	□□□□□ -0.63
CSM2	YIL132C	TRK2	P28584	889 aa		11.12	□□□□□ -0.63
CSM2	YIL132C	YHL008C	P38750	627 aa		11.12	□□□□□ -0.63
CSM2	YIL132C	POL32	P47110	350 aa		11.12	□□□□□ -0.63
CSM2	YIL132C	GCD6	P32501	712 aa	Known RBP	11.11	□□□□□ -0.63
CSM2	YIL132C	VPS35	P34110	944 aa		11.1	□□□□□ -0.63
CSM2	YIL132C	ECM2	P38241	364 aa	Known RBP	11.1	□□□□□ -0.63
CSM2	YIL132C	CIC1	P38779	376 aa	Known RBP	11.1	□□□□□ -0.63
CSM2	YIL132C	FLP1	P03870	423 aa		11.09	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 75.8 ms