RNA–Protein interactions for RNA: YHR108W

GGA2, Transcript of Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking, yeastyeast

Gene GGA2, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GGA2YHR108W PSK2Q08217 1101 aa9.58□□□□□ -0.88
GGA2YHR108W RPN12P32496 274 aa9.57□□□□□ -0.88
GGA2YHR108W PRX1P34227 261 aaKnown RBP9.57□□□□□ -0.88
GGA2YHR108W CTF18P49956 741 aa9.57□□□□□ -0.88
GGA2YHR108W SRC1Q03707 834 aa9.57□□□□□ -0.88
GGA2YHR108W NGR1P32831 672 aaKnown RBP9.56□□□□□ -0.88
GGA2YHR108W SIS2P36024 562 aa9.56□□□□□ -0.88
GGA2YHR108W RVS167P39743 482 aaKnown RBP9.56□□□□□ -0.88
GGA2YHR108W UTP22P53254 1237 aaPredicted RBP9.56□□□□□ -0.88
GGA2YHR108W PEX19Q07418 342 aa9.56□□□□□ -0.88
GGA2YHR108W YMR147WP40218 223 aaKnown RBP9.55□□□□□ -0.88
GGA2YHR108W RSC1P53236 928 aa9.55□□□□□ -0.88
GGA2YHR108W PIL1P53252 339 aaKnown RBP9.55□□□□□ -0.88
GGA2YHR108W CTI6Q08923 506 aa9.55□□□□□ -0.88
GGA2YHR108W PGA3Q12746 312 aaKnown RBP9.55□□□□□ -0.88
GGA2YHR108W BDF1P35817 686 aa9.55□□□□□ -0.88
GGA2YHR108W VID28P40547 921 aa9.55□□□□□ -0.88
GGA2YHR108W BBC1P47068 1157 aa9.55□□□□□ -0.88
GGA2YHR108W YKE2P52553 114 aa9.55□□□□□ -0.88
GGA2YHR108W LCD1Q04377 747 aa9.55□□□□□ -0.88
GGA2YHR108W ESF1Q06344 628 aaKnown RBP9.55□□□□□ -0.88
GGA2YHR108W SSF2Q12153 453 aaPredicted RBP9.55□□□□□ -0.88
GGA2YHR108W PEP3P27801 918 aa9.54□□□□□ -0.88
GGA2YHR108W YHL017WP38745 532 aa9.54□□□□□ -0.88
GGA2YHR108W HAL5P38970 855 aaKnown RBP9.54□□□□□ -0.88
GGA2YHR108W THI3Q07471 609 aa9.54□□□□□ -0.88
GGA2YHR108W ELG1Q12050 791 aa9.54□□□□□ -0.88
GGA2YHR108W APC11Q12157 165 aa9.54□□□□□ -0.88
GGA2YHR108W TAH18Q12181 623 aa9.54□□□□□ -0.88
GGA2YHR108W IMP2'P32351 346 aa9.53□□□□□ -0.88
GGA2YHR108W SKI2P35207 1287 aaKnown RBP RIP-Chip data9.53□□□□□ -0.88not detected
GGA2YHR108W NUG1P40010 520 aaKnown RBP9.53□□□□□ -0.88
GGA2YHR108W ETT1Q08421 412 aaKnown RBP9.53□□□□□ -0.88
GGA2YHR108W DPH6Q12429 685 aa9.53□□□□□ -0.88
GGA2YHR108W LAM4P38800 1345 aa9.53□□□□□ -0.88
GGA2YHR108W MET1P36150 593 aa9.52□□□□□ -0.88
GGA2YHR108W RKM3P38222 552 aa9.52□□□□□ -0.88
GGA2YHR108W PKH3Q03306 898 aaPredicted RBP9.52□□□□□ -0.88
GGA2YHR108W CPA2P03965 1118 aaKnown RBP9.52□□□□□ -0.89
GGA2YHR108W MGM1P32266 881 aa9.52□□□□□ -0.89
GGA2YHR108W CCT5P40413 562 aaKnown RBP9.52□□□□□ -0.89
GGA2YHR108W ENT3P47160 408 aa9.52□□□□□ -0.89
GGA2YHR108W SYF1Q04048 859 aaPredicted RBP9.52□□□□□ -0.89
GGA2YHR108W BDF2Q07442 638 aa9.52□□□□□ -0.89
GGA2YHR108W MATALPHA2P0CY08 210 aa9.51□□□□□ -0.89
GGA2YHR108W HMLALPHA2P0CY09 210 aa9.51□□□□□ -0.89
GGA2YHR108W FBP26P32604 452 aa9.51□□□□□ -0.89
GGA2YHR108W ELM1P32801 640 aa9.51□□□□□ -0.89
GGA2YHR108W GLO3P38682 493 aaKnown RBP9.51□□□□□ -0.89
GGA2YHR108W KRE33P53914 1056 aaKnown RBP9.51□□□□□ -0.89
GGA2YHR108W YPL150WQ12152 901 aa9.51□□□□□ -0.89
GGA2YHR108W BUD31P25337 157 aaPredicted RBP9.5□□□□□ -0.89
GGA2YHR108W DID4P36108 232 aa9.5□□□□□ -0.89
GGA2YHR108W RPG1P38249 964 aaKnown RBP9.5□□□□□ -0.89
GGA2YHR108W ICP55P40051 511 aa9.5□□□□□ -0.89
GGA2YHR108W BUD6P41697 788 aa9.5□□□□□ -0.89
GGA2YHR108W IRC8P47046 822 aa9.5□□□□□ -0.89
GGA2YHR108W LYS4P49367 693 aaPredicted RBP9.5□□□□□ -0.89
GGA2YHR108W HPC2Q01448 625 aa9.5□□□□□ -0.89
GGA2YHR108W NPL4P33755 580 aa9.5□□□□□ -0.89
GGA2YHR108W ALD3P54114 506 aa9.5□□□□□ -0.89
GGA2YHR108W KAR5Q04746 504 aa9.5□□□□□ -0.89
GGA2YHR108W SPN1Q06505 410 aaPredicted RBP9.5□□□□□ -0.89
GGA2YHR108W GEF1P37020 779 aa9.49□□□□□ -0.89
GGA2YHR108W CRG1P38892 291 aaRIP-Chip data9.49□□□□□ -0.89not detected
GGA2YHR108W RRP8P38961 392 aaKnown RBP9.49□□□□□ -0.89
GGA2YHR108W CYB2P00175 591 aa9.48□□□□□ -0.89
GGA2YHR108W GLN1P32288 370 aaKnown RBP9.48□□□□□ -0.89
GGA2YHR108W IOC3P43596 787 aa9.48□□□□□ -0.89
GGA2YHR108W UBP10P53874 792 aaPredicted RBP9.48□□□□□ -0.89
GGA2YHR108W INM2Q05533 292 aa9.48□□□□□ -0.89
GGA2YHR108W FRS2P15625 503 aaKnown RBP9.47□□□□□ -0.89
GGA2YHR108W RDS1P25611 832 aa9.47□□□□□ -0.89
GGA2YHR108W IRC3Q06683 689 aa9.47□□□□□ -0.89
GGA2YHR108W TAF13P11747 167 aa9.47□□□□□ -0.89
GGA2YHR108W MBR1P23493 339 aa9.47□□□□□ -0.89
GGA2YHR108W MIC60P36112 540 aa9.47□□□□□ -0.89
GGA2YHR108W RFC5P38251 354 aa9.47□□□□□ -0.89
GGA2YHR108W RPN1P38764 993 aaKnown RBP9.47□□□□□ -0.89
GGA2YHR108W ECM23Q02710 187 aa9.47□□□□□ -0.89
GGA2YHR108W EST2Q06163 884 aa9.47□□□□□ -0.89
GGA2YHR108W RIX7Q07844 837 aaKnown RBP9.47□□□□□ -0.89
GGA2YHR108W GRX7P38068 203 aa9.46□□□□□ -0.9
GGA2YHR108W MAL33P38157 468 aa9.46□□□□□ -0.9
GGA2YHR108W TOS1P38288 455 aa9.46□□□□□ -0.9
GGA2YHR108W YIR042CP40586 236 aa9.46□□□□□ -0.9
GGA2YHR108W ALD2P47771 506 aa9.46□□□□□ -0.9
GGA2YHR108W SAS4Q04003 481 aa9.46□□□□□ -0.9
GGA2YHR108W YLR407WQ06070 228 aa9.46□□□□□ -0.9
GGA2YHR108W PPM2Q08282 695 aa9.46□□□□□ -0.9
GGA2YHR108W FRD1P32614 470 aaKnown RBP9.45□□□□□ -0.9
GGA2YHR108W RER2P35196 286 aa9.45□□□□□ -0.9
GGA2YHR108W MNN4P36044 1178 aa9.45□□□□□ -0.9
GGA2YHR108W MPH3P0CE00 602 aa9.45□□□□□ -0.9
GGA2YHR108W CTH1P47976 325 aa9.45□□□□□ -0.9
GGA2YHR108W RPT4P53549 437 aaKnown RBP9.45□□□□□ -0.9
GGA2YHR108W DDP1Q99321 188 aaKnown RBP9.45□□□□□ -0.9
GGA2YHR108W PFK2P16862 959 aaKnown RBP RIP-Chip data9.44□□□□□ -0.9not detected
GGA2YHR108W COQ1P18900 473 aa9.44□□□□□ -0.9
GGA2YHR108W BOI1P38041 980 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms