RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	TPS3	P38426	1054 aa	Known RBP	7.17	□□□□□ -1.26
RSC30	YHR056C	POL5	P39985	1022 aa	Known RBP	7.17	□□□□□ -1.26
RSC30	YHR056C	FIR1	P40020	876 aa		7.17	□□□□□ -1.26
RSC30	YHR056C	SUP35	P05453	685 aa	Known RBP	7.17	□□□□□ -1.26
RSC30	YHR056C	SPL2	P38839	148 aa		7.17	□□□□□ -1.26
RSC30	YHR056C	MTC5	Q03897	1148 aa		7.16	□□□□□ -1.26
RSC30	YHR056C	PPM2	Q08282	695 aa		7.16	□□□□□ -1.26
RSC30	YHR056C	MGM1	P32266	881 aa		7.16	□□□□□ -1.26
RSC30	YHR056C	VPS62	P53285	467 aa		7.16	□□□□□ -1.26
RSC30	YHR056C	WRS1	Q12109	432 aa	Known RBP	7.16	□□□□□ -1.26
RSC30	YHR056C	ICL2	Q12031	575 aa		7.15	□□□□□ -1.26
RSC30	YHR056C	TRK1	P12685	1235 aa		7.15	□□□□□ -1.26
RSC30	YHR056C	BMS1	Q08965	1183 aa	Known RBP	7.14	□□□□□ -1.27
RSC30	YHR056C	SWI1	P09547	1314 aa		7.14	□□□□□ -1.27
RSC30	YHR056C	COQ4	O13525	335 aa		7.14	□□□□□ -1.27
RSC30	YHR056C	JJJ2	P46997	583 aa		7.14	□□□□□ -1.27
RSC30	YHR056C	DIT2	P21595	489 aa		7.14	□□□□□ -1.27
RSC30	YHR056C	GSM1	P42950	618 aa		7.13	□□□□□ -1.27
RSC30	YHR056C	SRC1	Q03707	834 aa		7.13	□□□□□ -1.27
RSC30	YHR056C	LCB1	P25045	558 aa	Known RBP	7.13	□□□□□ -1.27
RSC30	YHR056C	OCT1	P35999	772 aa		7.13	□□□□□ -1.27
RSC30	YHR056C	MSC7	P38694	644 aa		7.13	□□□□□ -1.27
RSC30	YHR056C	YDR306C	Q06640	478 aa		7.13	□□□□□ -1.27
RSC30	YHR056C	THI3	Q07471	609 aa		7.13	□□□□□ -1.27
RSC30	YHR056C	RPS7A	P26786	190 aa	Known RBP	7.12	□□□□□ -1.27
RSC30	YHR056C	YPL034W	Q03083	165 aa		7.12	□□□□□ -1.27
RSC30	YHR056C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	7.12	□□□□□ -1.27	not detected
RSC30	YHR056C	CDC60	P26637	1090 aa	Known RBP	7.12	□□□□□ -1.27
RSC30	YHR056C	VAB2	P40003	282 aa		7.12	□□□□□ -1.27
RSC30	YHR056C	ATG1	P53104	897 aa		7.12	□□□□□ -1.27
RSC30	YHR056C	GYP7	P48365	746 aa		7.11	□□□□□ -1.27
RSC30	YHR056C	ITC1	P53125	1264 aa		7.11	□□□□□ -1.27
RSC30	YHR056C	IRC4	Q03036	179 aa		7.11	□□□□□ -1.27
RSC30	YHR056C	TUS1	Q06412	1307 aa		7.11	□□□□□ -1.27
RSC30	YHR056C	MXR1	P40029	184 aa		7.11	□□□□□ -1.27
RSC30	YHR056C	YMR084W	A2P2R3	262 aa		7.1	□□□□□ -1.27
RSC30	YHR056C	RAD53	P22216	821 aa		7.1	□□□□□ -1.27
RSC30	YHR056C	NGR1	P32831	672 aa	Known RBP	7.1	□□□□□ -1.27
RSC30	YHR056C	LYS14	P40971	790 aa		7.1	□□□□□ -1.27
RSC30	YHR056C	RRP46	P53256	223 aa	Predicted RBP	7.1	□□□□□ -1.27
RSC30	YHR056C	ZDS2	P54786	942 aa		7.1	□□□□□ -1.27
RSC30	YHR056C	CFT2	Q12102	859 aa	Predicted RBP	7.1	□□□□□ -1.27
RSC30	YHR056C	PRD1	P25375	712 aa		7.09	□□□□□ -1.27
RSC30	YHR056C	PSH1	Q12161	406 aa		7.09	□□□□□ -1.27
RSC30	YHR056C	KEL1	P38853	1164 aa	Known RBP	7.08	□□□□□ -1.28
RSC30	YHR056C	YFH7	P43591	353 aa		7.08	□□□□□ -1.28
RSC30	YHR056C	RTR1	P40084	226 aa	Predicted RBP	7.07	□□□□□ -1.28
RSC30	YHR056C	PUS6	P53294	404 aa		7.07	□□□□□ -1.28
RSC30	YHR056C	FCP1	Q03254	732 aa		7.07	□□□□□ -1.28
RSC30	YHR056C	TOS4	Q06266	489 aa		7.07	□□□□□ -1.28
RSC30	YHR056C	DUR1,2	P32528	1835 aa	Known RBP	7.07	□□□□□ -1.28
RSC30	YHR056C	MCD4	P36051	919 aa		7.07	□□□□□ -1.28
RSC30	YHR056C	NOP2	P40991	618 aa	Known RBP	7.07	□□□□□ -1.28
RSC30	YHR056C	APL6	P46682	809 aa		7.07	□□□□□ -1.28
RSC30	YHR056C	YNR014W	P53719	212 aa		7.07	□□□□□ -1.28
RSC30	YHR056C	MSH4	P40965	878 aa	Predicted RBP	7.06	□□□□□ -1.28
RSC30	YHR056C	YAF9	P53930	226 aa		7.06	□□□□□ -1.28
RSC30	YHR056C	PER1	P25625	357 aa		7.06	□□□□□ -1.28
RSC30	YHR056C	YJL007C	P47080	104 aa		7.06	□□□□□ -1.28
RSC30	YHR056C	PCL8	Q08966	492 aa		7.06	□□□□□ -1.28
RSC30	YHR056C	MDM20	Q12387	796 aa	Known RBP	7.06	□□□□□ -1.28
RSC30	YHR056C	PMA1	P05030	918 aa	Known RBP	7.05	□□□□□ -1.28
RSC30	YHR056C	MRP7	P12687	371 aa		7.05	□□□□□ -1.28
RSC30	YHR056C	SNU71	P53207	620 aa	Known RBP	7.05	□□□□□ -1.28
RSC30	YHR056C	IXR1	P33417	597 aa		7.04	□□□□□ -1.28
RSC30	YHR056C	MET7	Q08645	548 aa		7.04	□□□□□ -1.28
RSC30	YHR056C	SNU66	Q12420	587 aa	Predicted RBP	7.04	□□□□□ -1.28
RSC30	YHR056C	ADP1	P25371	1049 aa		7.04	□□□□□ -1.28
RSC30	YHR056C	PEX29	Q03370	554 aa		7.04	□□□□□ -1.28
RSC30	YHR056C	NUP133	P36161	1157 aa		7.04	□□□□□ -1.28
RSC30	YHR056C	SUB2	Q07478	446 aa	Known RBP	7.04	□□□□□ -1.28
RSC30	YHR056C	UIP5	P36137	443 aa		7.03	□□□□□ -1.28
RSC30	YHR056C	ACA1	P39970	489 aa		7.03	□□□□□ -1.28
RSC30	YHR056C	MPP10	P47083	593 aa	Known RBP	7.03	□□□□□ -1.28
RSC30	YHR056C	HEM1	P09950	548 aa	Predicted RBP	7.02	□□□□□ -1.29
RSC30	YHR056C	PKC1	P24583	1151 aa		7.02	□□□□□ -1.29
RSC30	YHR056C	AHC1	Q12433	566 aa		7.02	□□□□□ -1.29
RSC30	YHR056C	YOR131C	Q12486	218 aa		7.02	□□□□□ -1.29
RSC30	YHR056C	PRY3	P47033	881 aa		7.01	□□□□□ -1.29
RSC30	YHR056C	SUT2	Q12286	268 aa		7.01	□□□□□ -1.29
RSC30	YHR056C	SPB4	P25808	606 aa	Predicted RBP	7.01	□□□□□ -1.29
RSC30	YHR056C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	7	□□□□□ -1.29	not detected
RSC30	YHR056C	YDJ1	P25491	409 aa	Known RBP	7	□□□□□ -1.29
RSC30	YHR056C	SNF3	P10870	884 aa		7	□□□□□ -1.29
RSC30	YHR056C	KIN1	P13185	1064 aa		7	□□□□□ -1.29
RSC30	YHR056C	PIF1	P07271	859 aa		6.99	□□□□□ -1.29
RSC30	YHR056C	YJR107W	P47145	328 aa		6.99	□□□□□ -1.29
RSC30	YHR056C	RGT1	P32862	1170 aa		6.99	□□□□□ -1.29
RSC30	YHR056C	UBP12	P39538	1254 aa		6.99	□□□□□ -1.29
RSC30	YHR056C	SRT1	Q03175	343 aa		6.99	□□□□□ -1.29
RSC30	YHR056C	ERG12	P07277	443 aa		6.98	□□□□□ -1.29
RSC30	YHR056C	GPB2	P39717	880 aa		6.98	□□□□□ -1.29
RSC30	YHR056C	LDB19	Q12502	818 aa		6.98	□□□□□ -1.29
RSC30	YHR056C	SRS2	P12954	1174 aa		6.98	□□□□□ -1.29
RSC30	YHR056C	DAL5	P15365	543 aa		6.98	□□□□□ -1.29
RSC30	YHR056C	THI22	Q06490	572 aa		6.98	□□□□□ -1.29
RSC30	YHR056C	TFC8	Q12308	588 aa		6.98	□□□□□ -1.29
RSC30	YHR056C	YBL028C	P38202	106 aa		6.97	□□□□□ -1.29
RSC30	YHR056C	YBR287W	P38355	427 aa		6.97	□□□□□ -1.29
RSC30	YHR056C	KSP1	P38691	1029 aa	Known RBP	6.97	□□□□□ -1.29

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms