RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C PAM1P37304 830 aaKnown RBP5.2□□□□□ -1.58
MSM1YGR171C MGE1P38523 228 aa5.2□□□□□ -1.58
MSM1YGR171C ALD2P47771 506 aa5.2□□□□□ -1.58
MSM1YGR171C FIR1P40020 876 aa5.19□□□□□ -1.58
MSM1YGR171C MTO1P53070 669 aa5.19□□□□□ -1.58
MSM1YGR171C RRP15Q06511 250 aaPredicted RBP5.19□□□□□ -1.58
MSM1YGR171C TY1A-DR3Q12441 440 aa5.19□□□□□ -1.58
MSM1YGR171C KAP122P32767 1081 aa5.18□□□□□ -1.58
MSM1YGR171C GCR2Q01722 534 aa5.18□□□□□ -1.58
MSM1YGR171C GPI13Q07830 1017 aa5.18□□□□□ -1.58
MSM1YGR171C MNL2Q12205 849 aa5.18□□□□□ -1.58
MSM1YGR171C TCB1Q12466 1186 aa5.18□□□□□ -1.58
MSM1YGR171C PDC6P26263 563 aaKnown RBP5.17□□□□□ -1.58
MSM1YGR171C YNL011CP53980 444 aa5.17□□□□□ -1.58
MSM1YGR171C UBP2Q01476 1272 aa5.17□□□□□ -1.58
MSM1YGR171C MSN1P22148 382 aa5.17□□□□□ -1.58
MSM1YGR171C RAD55P38953 406 aa5.17□□□□□ -1.58
MSM1YGR171C BRE2P43132 505 aa5.17□□□□□ -1.58
MSM1YGR171C CDC55Q00362 526 aa5.17□□□□□ -1.58
MSM1YGR171C YLR346CQ06139 101 aa5.17□□□□□ -1.58
MSM1YGR171C PSH1Q12161 406 aa5.17□□□□□ -1.58
MSM1YGR171C GCD6P32501 712 aaKnown RBP5.16□□□□□ -1.58
MSM1YGR171C ISW1P38144 1129 aa5.16□□□□□ -1.58
MSM1YGR171C YBR287WP38355 427 aa5.16□□□□□ -1.58
MSM1YGR171C UBP15P50101 1230 aa5.16□□□□□ -1.58
MSM1YGR171C ORC1P54784 914 aaPredicted RBP5.16□□□□□ -1.58
MSM1YGR171C RPC31P17890 251 aa5.15□□□□□ -1.58
MSM1YGR171C GIP1P38229 639 aa5.15□□□□□ -1.58
MSM1YGR171C NTA1P40354 457 aa5.15□□□□□ -1.58
MSM1YGR171C LEU1P07264 779 aaKnown RBP5.14□□□□□ -1.59
MSM1YGR171C PHO4P07270 312 aaKnown RBP5.14□□□□□ -1.59
MSM1YGR171C SEC8P32855 1065 aa5.14□□□□□ -1.59
MSM1YGR171C SAM37P50110 327 aa5.14□□□□□ -1.59
MSM1YGR171C OPT2Q06593 877 aa5.14□□□□□ -1.59
MSM1YGR171C RPT1P33299 467 aaKnown RBP5.14□□□□□ -1.59
MSM1YGR171C IRS4P36115 615 aaKnown RBP5.14□□□□□ -1.59
MSM1YGR171C RGD2P43556 714 aa5.14□□□□□ -1.59
MSM1YGR171C YJR107WP47145 328 aa5.14□□□□□ -1.59
MSM1YGR171C RSC4Q02206 625 aa5.14□□□□□ -1.59
MSM1YGR171C OYE2Q03558 400 aaKnown RBP5.14□□□□□ -1.59
MSM1YGR171C SRC1Q03707 834 aa5.14□□□□□ -1.59
MSM1YGR171C BSC2Q05611 235 aa5.14□□□□□ -1.59
MSM1YGR171C YOR296WQ08748 1289 aa5.14□□□□□ -1.59
MSM1YGR171C STB3Q12427 513 aa5.14□□□□□ -1.59
MSM1YGR171C BSD2P38356 321 aa5.13□□□□□ -1.59
MSM1YGR171C DAK2P43550 591 aa5.13□□□□□ -1.59
MSM1YGR171C CUS1Q02554 436 aaPredicted RBP5.13□□□□□ -1.59
MSM1YGR171C TIF6Q12522 245 aaKnown RBP5.13□□□□□ -1.59
MSM1YGR171C RGP1P16664 663 aa5.12□□□□□ -1.59
MSM1YGR171C CIC1P38779 376 aaKnown RBP5.12□□□□□ -1.59
MSM1YGR171C PSY2P40164 858 aa5.12□□□□□ -1.59
MSM1YGR171C NOC3Q07896 663 aaPredicted RBP5.12□□□□□ -1.59
MSM1YGR171C VPS35P34110 944 aa5.11□□□□□ -1.59
MSM1YGR171C MET1P36150 593 aa5.11□□□□□ -1.59
MSM1YGR171C OSH7P38755 437 aa5.11□□□□□ -1.59
MSM1YGR171C SKP1P52286 194 aa5.11□□□□□ -1.59
MSM1YGR171C CDC19P00549 500 aaKnown RBP5.11□□□□□ -1.59
MSM1YGR171C RPP1AP05318 106 aaPredicted RBP5.11□□□□□ -1.59
MSM1YGR171C GLY1P37303 387 aaKnown RBP5.11□□□□□ -1.59
MSM1YGR171C SCW11P53189 542 aa5.11□□□□□ -1.59
MSM1YGR171C SVF1Q05515 481 aa5.11□□□□□ -1.59
MSM1YGR171C OXR1Q08952 273 aa5.11□□□□□ -1.59
MSM1YGR171C NAB2P32505 525 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
MSM1YGR171C MRPL16P38064 232 aa5.1□□□□□ -1.59
MSM1YGR171C APM2P38700 605 aa5.1□□□□□ -1.59
MSM1YGR171C AIM46P38885 310 aa5.1□□□□□ -1.59
MSM1YGR171C TY1A-BLQ12266 440 aa5.09□□□□□ -1.59
MSM1YGR171C NCL1P38205 684 aaKnown RBP5.09□□□□□ -1.6
MSM1YGR171C YHL008CP38750 627 aa5.09□□□□□ -1.6
MSM1YGR171C EMG1Q06287 252 aaKnown RBP5.09□□□□□ -1.6
MSM1YGR171C INP54Q08227 384 aaKnown RBP5.09□□□□□ -1.6
MSM1YGR171C YIL165CP40446 119 aa5.08□□□□□ -1.6
MSM1YGR171C FYV10P40492 516 aa5.08□□□□□ -1.6
MSM1YGR171C ITC1P53125 1264 aa5.08□□□□□ -1.6
MSM1YGR171C ECM2P38241 364 aaKnown RBP5.07□□□□□ -1.6
MSM1YGR171C SPR28Q04921 423 aa5.07□□□□□ -1.6
MSM1YGR171C NAP1P25293 417 aaKnown RBP5.06□□□□□ -1.6
MSM1YGR171C MCM2P29469 868 aa5.06□□□□□ -1.6
MSM1YGR171C NAM8Q00539 523 aaKnown RBP5.06□□□□□ -1.6
MSM1YGR171C YDR444WQ04093 687 aa5.06□□□□□ -1.6
MSM1YGR171C LCB5Q06147 687 aaKnown RBP5.06□□□□□ -1.6
MSM1YGR171C RPS26AP39938 119 aaKnown RBP5.06□□□□□ -1.6
MSM1YGR171C RPS26BP39939 119 aaKnown RBP5.06□□□□□ -1.6
MSM1YGR171C YGR122WP53272 402 aa5.06□□□□□ -1.6
MSM1YGR171C YNR040WP53736 256 aa5.06□□□□□ -1.6
MSM1YGR171C FLP1P03870 423 aa5.05□□□□□ -1.6
MSM1YGR171C DIT1P21623 536 aa5.05□□□□□ -1.6
MSM1YGR171C MET22P32179 357 aa5.05□□□□□ -1.6
MSM1YGR171C YCS4Q06156 1176 aa5.05□□□□□ -1.6
MSM1YGR171C JIP5Q06214 492 aaPredicted RBP5.05□□□□□ -1.6
MSM1YGR171C PEP7P32609 515 aa5.04□□□□□ -1.6
MSM1YGR171C ROG3P43602 733 aa5.04□□□□□ -1.6
MSM1YGR171C CTR9P89105 1077 aa5.04□□□□□ -1.6
MSM1YGR171C DAL4Q04895 635 aa5.04□□□□□ -1.6
MSM1YGR171C YER156CP40093 338 aaKnown RBP5.03□□□□□ -1.6
MSM1YGR171C CUZ1P53899 274 aa5.03□□□□□ -1.6
MSM1YGR171C HEH2Q03281 663 aa5.03□□□□□ -1.6
MSM1YGR171C RMD1Q03441 430 aa5.03□□□□□ -1.6
MSM1YGR171C YMR265CQ03508 461 aaKnown RBP5.03□□□□□ -1.6
MSM1YGR171C TY1A-MR1Q04215 440 aa5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms