RNA–Protein interactions for RNA: YGL048C

RPT6, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT6, Length 1,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT6YGL048C SAS4Q04003 481 aa6.92□□□□□ -1.3
RPT6YGL048C KCC4P25389 1037 aa6.91□□□□□ -1.3
RPT6YGL048C YKL222CP35995 705 aa6.91□□□□□ -1.3
RPT6YGL048C BUD27P43573 796 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
RPT6YGL048C GYP1Q08484 637 aa6.91□□□□□ -1.3
RPT6YGL048C ALE1Q08548 619 aa6.91□□□□□ -1.3
RPT6YGL048C PHM7Q12252 991 aa6.91□□□□□ -1.3
RPT6YGL048C YPR015CQ12531 247 aa6.91□□□□□ -1.3
RPT6YGL048C KRI1P42846 591 aaKnown RBP6.9□□□□□ -1.3
RPT6YGL048C CWH41P53008 833 aa6.9□□□□□ -1.3
RPT6YGL048C CTI6Q08923 506 aa6.9□□□□□ -1.3
RPT6YGL048C PRT1P06103 763 aaKnown RBP6.89□□□□□ -1.31
RPT6YGL048C YER156CP40093 338 aaKnown RBP6.89□□□□□ -1.31
RPT6YGL048C STR2P47164 639 aa6.89□□□□□ -1.31
RPT6YGL048C RRT14P40470 206 aa6.88□□□□□ -1.31
RPT6YGL048C ISM1P48526 1002 aa6.88□□□□□ -1.31
RPT6YGL048C MDG1P53885 366 aa6.88□□□□□ -1.31
RPT6YGL048C YNL050CP53952 270 aa6.88□□□□□ -1.31
RPT6YGL048C BUD20Q08004 166 aaPredicted RBP6.88□□□□□ -1.31
RPT6YGL048C ARG8P18544 423 aa6.87□□□□□ -1.31
RPT6YGL048C UGA3P26370 528 aa6.87□□□□□ -1.31
RPT6YGL048C GCD11P32481 527 aaKnown RBP6.87□□□□□ -1.31
RPT6YGL048C MNN4P36044 1178 aa6.87□□□□□ -1.31
RPT6YGL048C PFF1P38244 976 aa6.87□□□□□ -1.31
RPT6YGL048C BRL1P38770 471 aa6.87□□□□□ -1.31
RPT6YGL048C LPD1P09624 499 aaKnown RBP6.86□□□□□ -1.31
RPT6YGL048C SIT4P20604 311 aa6.86□□□□□ -1.31
RPT6YGL048C PRD1P25375 712 aa6.86□□□□□ -1.31
RPT6YGL048C SMY1P32364 656 aaKnown RBP6.86□□□□□ -1.31
RPT6YGL048C SER1P33330 395 aaKnown RBP6.86□□□□□ -1.31
RPT6YGL048C RPS0BP46654 252 aaKnown RBP6.86□□□□□ -1.31
RPT6YGL048C NIS1P53939 407 aa6.86□□□□□ -1.31
RPT6YGL048C SSP2Q08646 371 aa6.86□□□□□ -1.31
RPT6YGL048C PAT1P25644 796 aaKnown RBP6.85□□□□□ -1.31
RPT6YGL048C MRF1P30775 413 aaPredicted RBP6.85□□□□□ -1.31
RPT6YGL048C YGL082WP53155 381 aa6.85□□□□□ -1.31
RPT6YGL048C YPR204WQ08995 1032 aa6.85□□□□□ -1.31
RPT6YGL048C RTR1P40084 226 aaPredicted RBP6.84□□□□□ -1.31
RPT6YGL048C SQS1P53866 767 aaKnown RBP6.84□□□□□ -1.31
RPT6YGL048C RAT1Q02792 1006 aaKnown RBP6.84□□□□□ -1.31
RPT6YGL048C NSE3Q05541 303 aa6.84□□□□□ -1.31
RPT6YGL048C KIN1P13185 1064 aa6.83□□□□□ -1.32
RPT6YGL048C FPK1P53739 893 aa6.83□□□□□ -1.32
RPT6YGL048C YNL115CP53925 644 aa6.83□□□□□ -1.32
RPT6YGL048C ERO1Q03103 563 aa6.83□□□□□ -1.32
RPT6YGL048C THI22Q06490 572 aa6.83□□□□□ -1.32
RPT6YGL048C APL2P36000 726 aaPredicted RBP6.82□□□□□ -1.32
RPT6YGL048C ZDS1P50111 915 aaKnown RBP6.82□□□□□ -1.32
RPT6YGL048C BDF2Q07442 638 aa6.82□□□□□ -1.32
RPT6YGL048C LYS2P07702 1392 aa6.82□□□□□ -1.32
RPT6YGL048C COQ4O13525 335 aa6.81□□□□□ -1.32
RPT6YGL048C CAF20P12962 161 aaKnown RBP6.81□□□□□ -1.32
RPT6YGL048C KEX2P13134 814 aa6.81□□□□□ -1.32
RPT6YGL048C SPT16P32558 1035 aaKnown RBP6.81□□□□□ -1.32
RPT6YGL048C MAM1P40065 302 aa6.81□□□□□ -1.32
RPT6YGL048C HST2P53686 357 aa6.81□□□□□ -1.32
RPT6YGL048C BMS1Q08965 1183 aaKnown RBP6.81□□□□□ -1.32
RPT6YGL048C EBP2P36049 427 aaKnown RBP6.8□□□□□ -1.32
RPT6YGL048C ZDS2P54786 942 aa6.8□□□□□ -1.32
RPT6YGL048C DIB1Q06819 143 aaPredicted RBP6.8□□□□□ -1.32
RPT6YGL048C RTT109Q07794 436 aa6.8□□□□□ -1.32
RPT6YGL048C TY1A-DR4O74302 440 aa6.79□□□□□ -1.32
RPT6YGL048C TY1A-HP0C2I4 478 aaKnown RBP6.79□□□□□ -1.32
RPT6YGL048C TY1A-AP0CX57 440 aa6.79□□□□□ -1.32
RPT6YGL048C TY1A-PR1P0CX58 440 aa6.79□□□□□ -1.32
RPT6YGL048C TY1A-ORP0CX59 440 aa6.79□□□□□ -1.32
RPT6YGL048C TY1A-PR2P0CX60 440 aa6.79□□□□□ -1.32
RPT6YGL048C TY1A-DR5P0CX65 440 aa6.79□□□□□ -1.32
RPT6YGL048C TY1A-ER2P0CX66 440 aa6.79□□□□□ -1.32
RPT6YGL048C TY1A-GR3P0CX67 440 aa6.79□□□□□ -1.32
RPT6YGL048C TY1A-LR1P0CX68 440 aa6.79□□□□□ -1.32
RPT6YGL048C TY1A-MR2P0CX69 440 aa6.79□□□□□ -1.32
RPT6YGL048C SEC2P17065 759 aa6.79□□□□□ -1.32
RPT6YGL048C SSA4P22202 642 aaKnown RBP6.79□□□□□ -1.32
RPT6YGL048C ICL1P28240 557 aaPredicted RBP6.79□□□□□ -1.32
RPT6YGL048C TY1A-JR2P47099 440 aa6.79□□□□□ -1.32
RPT6YGL048C UBP16Q02863 499 aa6.79□□□□□ -1.32
RPT6YGL048C TY1A-DR1Q03856 440 aa6.79□□□□□ -1.32
RPT6YGL048C TY1A-ML1Q04706 440 aaKnown RBP6.79□□□□□ -1.32
RPT6YGL048C TY1A-BRQ12217 440 aa6.79□□□□□ -1.32
RPT6YGL048C TY1A-NL2Q12470 440 aa6.79□□□□□ -1.32
RPT6YGL048C TY1A-GR2Q12485 440 aa6.79□□□□□ -1.32
RPT6YGL048C SSK22P25390 1331 aaPredicted RBP6.78□□□□□ -1.32
RPT6YGL048C SHC1P39000 512 aa6.78□□□□□ -1.32
RPT6YGL048C MPP10P47083 593 aaKnown RBP6.78□□□□□ -1.32
RPT6YGL048C HEF3P53978 1044 aaKnown RBP6.78□□□□□ -1.32
RPT6YGL048C PUS5Q06244 254 aa6.78□□□□□ -1.32
RPT6YGL048C IRC3Q06683 689 aa6.78□□□□□ -1.32
RPT6YGL048C YOL057WQ08225 711 aa6.78□□□□□ -1.32
RPT6YGL048C HAT1Q12341 374 aa6.78□□□□□ -1.32
RPT6YGL048C MMP1Q12372 583 aa6.78□□□□□ -1.32
RPT6YGL048C YEL077CQ3E7X8 1277 aa6.78□□□□□ -1.32
RPT6YGL048C RPS9BP05755 195 aaKnown RBP6.77□□□□□ -1.33
RPT6YGL048C ERG12P07277 443 aa6.77□□□□□ -1.33
RPT6YGL048C SLY41P22215 453 aa6.77□□□□□ -1.33
RPT6YGL048C YKU70P32807 602 aa6.77□□□□□ -1.33
RPT6YGL048C CSN12P47130 423 aa6.77□□□□□ -1.33
RPT6YGL048C GYP7P48365 746 aa6.77□□□□□ -1.33
RPT6YGL048C SYF1Q04048 859 aaPredicted RBP6.77□□□□□ -1.33
RPT6YGL048C ATG20Q07528 640 aa6.77□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms