RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W HOS4P40480 1083 aa4.28□□□□□ -1.72
CHD1YER164W PDR18P53756 1333 aa4.28□□□□□ -1.73
CHD1YER164W PET123P17558 318 aa4.27□□□□□ -1.73
CHD1YER164W ECM21P38167 1117 aaKnown RBP4.27□□□□□ -1.73
CHD1YER164W VID28P40547 921 aa4.27□□□□□ -1.73
CHD1YER164W YNL193WP53870 558 aa4.27□□□□□ -1.73
CHD1YER164W UTP13Q05946 817 aaKnown RBP4.27□□□□□ -1.73
CHD1YER164W SGD1Q06132 899 aa4.27□□□□□ -1.73
CHD1YER164W RIM20Q12033 661 aa4.27□□□□□ -1.73
CHD1YER164W SSK22P25390 1331 aaPredicted RBP4.27□□□□□ -1.73
CHD1YER164W CDC16P09798 840 aa4.27□□□□□ -1.73
CHD1YER164W KNS1P32350 737 aaPredicted RBP4.27□□□□□ -1.73
CHD1YER164W ZUO1P32527 433 aaKnown RBP4.27□□□□□ -1.73
CHD1YER164W SQT1P35184 431 aa4.27□□□□□ -1.73
CHD1YER164W AAP1P37898 856 aaKnown RBP4.27□□□□□ -1.73
CHD1YER164W TY4A-HQ6Q5P6 413 aa4.27□□□□□ -1.73
CHD1YER164W YIL055CP40523 627 aaKnown RBP4.27□□□□□ -1.73
CHD1YER164W YAH1Q12184 172 aaKnown RBP4.27□□□□□ -1.73
CHD1YER164W NPR2P39923 615 aa4.26□□□□□ -1.73
CHD1YER164W BBC1P47068 1157 aa4.26□□□□□ -1.73
CHD1YER164W RBA50Q04418 439 aa4.26□□□□□ -1.73
CHD1YER164W TOP1P04786 769 aa4.26□□□□□ -1.73
CHD1YER164W SEC18P18759 758 aaKnown RBP4.26□□□□□ -1.73
CHD1YER164W SEG2P34250 1132 aa4.26□□□□□ -1.73
CHD1YER164W YGL242CP53066 181 aa4.26□□□□□ -1.73
CHD1YER164W PUS1Q12211 544 aaKnown RBP4.26□□□□□ -1.73
CHD1YER164W TFG2P41896 400 aaPredicted RBP4.26□□□□□ -1.73
CHD1YER164W STU2P46675 888 aa4.26□□□□□ -1.73
CHD1YER164W PBY1P38254 753 aa4.25□□□□□ -1.73
CHD1YER164W OMS1Q06668 471 aa4.25□□□□□ -1.73
CHD1YER164W TFC8Q12308 588 aa4.25□□□□□ -1.73
CHD1YER164W PRP31P49704 494 aaPredicted RBP4.25□□□□□ -1.73
CHD1YER164W SPC110P32380 944 aa4.25□□□□□ -1.73
CHD1YER164W RPT3P33298 428 aaKnown RBP4.25□□□□□ -1.73
CHD1YER164W MGA2P40578 1113 aa4.25□□□□□ -1.73
CHD1YER164W RIX7Q07844 837 aaKnown RBP4.25□□□□□ -1.73
CHD1YER164W DID4P36108 232 aa4.24□□□□□ -1.73
CHD1YER164W CIC1P38779 376 aaKnown RBP4.24□□□□□ -1.73
CHD1YER164W YMR124WP39523 943 aaKnown RBP4.24□□□□□ -1.73
CHD1YER164W YIR042CP40586 236 aa4.24□□□□□ -1.73
CHD1YER164W VMS1Q04311 632 aaKnown RBP4.24□□□□□ -1.73
CHD1YER164W SSP2Q08646 371 aa4.24□□□□□ -1.73
CHD1YER164W GRE2Q12068 342 aaKnown RBP4.24□□□□□ -1.73
CHD1YER164W NYV1Q12255 253 aa4.24□□□□□ -1.73
CHD1YER164W TTI1P36097 1038 aa4.24□□□□□ -1.73
CHD1YER164W RPG1P38249 964 aaKnown RBP4.24□□□□□ -1.73
CHD1YER164W SPT8P38915 602 aa4.24□□□□□ -1.73
CHD1YER164W EPS1P40557 701 aa4.24□□□□□ -1.73
CHD1YER164W KEX1P09620 729 aa4.24□□□□□ -1.73
CHD1YER164W MBR1P23493 339 aa4.24□□□□□ -1.73
CHD1YER164W NOC2P39744 710 aaKnown RBP4.24□□□□□ -1.73
CHD1YER164W NGR1P32831 672 aaKnown RBP4.24□□□□□ -1.73
CHD1YER164W MRPL10P36520 322 aa4.24□□□□□ -1.73
CHD1YER164W YLR271WQ06152 274 aa4.24□□□□□ -1.73
CHD1YER164W ESF1Q06344 628 aaKnown RBP4.24□□□□□ -1.73
CHD1YER164W ISW2Q08773 1120 aa4.24□□□□□ -1.73
CHD1YER164W DUR1,2P32528 1835 aaKnown RBP4.24□□□□□ -1.73
CHD1YER164W IMP2'P32351 346 aa4.23□□□□□ -1.73
CHD1YER164W SET2P46995 733 aaKnown RBP4.23□□□□□ -1.73
CHD1YER164W YJR008WP47085 338 aa4.23□□□□□ -1.73
CHD1YER164W HDA1P53973 706 aa4.23□□□□□ -1.73
CHD1YER164W SSL2Q00578 843 aa4.23□□□□□ -1.73
CHD1YER164W EIS1Q05050 843 aaKnown RBP4.23□□□□□ -1.73
CHD1YER164W LAM6Q08001 693 aa4.23□□□□□ -1.73
CHD1YER164W LYS2P07702 1392 aa4.23□□□□□ -1.73
CHD1YER164W RPN12P32496 274 aa4.23□□□□□ -1.73
CHD1YER164W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
CHD1YER164W ENP2P48234 707 aaKnown RBP4.23□□□□□ -1.73
CHD1YER164W TAN1P53072 289 aaPredicted RBP4.23□□□□□ -1.73
CHD1YER164W PIL1P53252 339 aaKnown RBP4.23□□□□□ -1.73
CHD1YER164W APC11Q12157 165 aa4.23□□□□□ -1.73
CHD1YER164W ROM2P51862 1356 aaKnown RBP4.23□□□□□ -1.73
CHD1YER164W SAP190P36123 1033 aa4.23□□□□□ -1.73
CHD1YER164W RTT107P38850 1070 aa4.23□□□□□ -1.73
CHD1YER164W STM1P39015 273 aaKnown RBP4.23□□□□□ -1.73
CHD1YER164W YJL181WP46987 611 aa4.23□□□□□ -1.73
CHD1YER164W HST1P53685 503 aa4.23□□□□□ -1.73
CHD1YER164W YCG1Q06680 1035 aa4.23□□□□□ -1.73
CHD1YER164W SMC6Q12749 1114 aa4.23□□□□□ -1.73
CHD1YER164W MRC1P25588 1096 aa4.22□□□□□ -1.73
CHD1YER164W KTR1P27810 393 aaKnown RBP4.22□□□□□ -1.73
CHD1YER164W RRP14P36080 434 aaKnown RBP4.22□□□□□ -1.73
CHD1YER164W SET1P38827 1080 aaKnown RBP4.22□□□□□ -1.73
CHD1YER164W RVS167P39743 482 aaKnown RBP4.22□□□□□ -1.73
CHD1YER164W NDC80P40460 691 aa4.22□□□□□ -1.73
CHD1YER164W CTF18P49956 741 aa4.22□□□□□ -1.73
CHD1YER164W TIM50Q02776 476 aa4.22□□□□□ -1.73
CHD1YER164W HCR1Q05775 265 aaKnown RBP4.22□□□□□ -1.73
CHD1YER164W PHM7Q12252 991 aa4.22□□□□□ -1.73
CHD1YER164W ARD1P07347 238 aaPredicted RBP4.22□□□□□ -1.73
CHD1YER164W MSB4Q12317 492 aa4.22□□□□□ -1.73
CHD1YER164W GYP5Q12344 894 aa4.22□□□□□ -1.73
CHD1YER164W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73 RIP-Chip
CHD1YER164W KAR3P17119 729 aa4.22□□□□□ -1.73
CHD1YER164W GRX1P25373 110 aaKnown RBP4.22□□□□□ -1.73
CHD1YER164W PRP40P33203 583 aaKnown RBP4.22□□□□□ -1.73
CHD1YER164W SWH1P35845 1188 aa4.22□□□□□ -1.73
CHD1YER164W AIM9P40053 627 aaKnown RBP4.22□□□□□ -1.73
CHD1YER164W HRQ1Q05549 1077 aa4.22□□□□□ -1.73
CHD1YER164W SNU66Q12420 587 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms