RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN3	YER021W	SGS1	P35187	1447 aa		5.11	□□□□□ -1.59
RPN3	YER021W	RPS31	P05759	152 aa	Known RBP	5.11	□□□□□ -1.59
RPN3	YER021W	IRE1	P32361	1115 aa		5.11	□□□□□ -1.59
RPN3	YER021W	Q0182	Q9ZZW1	134 aa		5.11	□□□□□ -1.59
RPN3	YER021W	HIR3	P47171	1648 aa		5.11	□□□□□ -1.59
RPN3	YER021W	MLF3	P32047	452 aa		5.1	□□□□□ -1.59
RPN3	YER021W	YBR197C	P38306	217 aa		5.1	□□□□□ -1.59
RPN3	YER021W	ADE12	P80210	433 aa	Known RBP	5.1	□□□□□ -1.59
RPN3	YER021W	FOX2	Q02207	900 aa	Known RBP	5.1	□□□□□ -1.59
RPN3	YER021W	YMR187C	Q03236	431 aa		5.1	□□□□□ -1.59
RPN3	YER021W	SCD5	P34758	872 aa		5.09	□□□□□ -1.59
RPN3	YER021W	BOL3	P39724	118 aa		5.09	□□□□□ -1.59
RPN3	YER021W	YMR265C	Q03508	461 aa	Known RBP	5.09	□□□□□ -1.59
RPN3	YER021W	DIT1	P21623	536 aa		5.08	□□□□□ -1.6
RPN3	YER021W	PDC6	P26263	563 aa	Known RBP	5.08	□□□□□ -1.6
RPN3	YER021W	UBP15	P50101	1230 aa		5.08	□□□□□ -1.6
RPN3	YER021W	UTP4	Q06679	776 aa	Known RBP	5.08	□□□□□ -1.6
RPN3	YER021W	PSH1	Q12161	406 aa		5.08	□□□□□ -1.6
RPN3	YER021W	ISC10	P32645	267 aa		5.08	□□□□□ -1.6
RPN3	YER021W	KAR5	Q04746	504 aa		5.08	□□□□□ -1.6
RPN3	YER021W	HAT1	Q12341	374 aa		5.08	□□□□□ -1.6
RPN3	YER021W	MRPL33	P20084	86 aa		5.07	□□□□□ -1.6
RPN3	YER021W	YCK2	P23292	546 aa	Known RBP	5.07	□□□□□ -1.6
RPN3	YER021W	ALD2	P47771	506 aa		5.07	□□□□□ -1.6
RPN3	YER021W	KRE33	P53914	1056 aa	Known RBP	5.07	□□□□□ -1.6
RPN3	YER021W	BPT1	P14772	1559 aa		5.07	□□□□□ -1.6
RPN3	YER021W	FUR4	P05316	633 aa	Known RBP	5.06	□□□□□ -1.6
RPN3	YER021W	BOI1	P38041	980 aa	Known RBP	5.06	□□□□□ -1.6
RPN3	YER021W	PEP1	P32319	1579 aa		5.05	□□□□□ -1.6
RPN3	YER021W	LEU1	P07264	779 aa	Known RBP	5.05	□□□□□ -1.6
RPN3	YER021W	RRN6	P32786	894 aa		5.05	□□□□□ -1.6
RPN3	YER021W	YTA6	P40328	754 aa		5.05	□□□□□ -1.6
RPN3	YER021W	YDR461C-A	Q2V2P7	80 aa		5.05	□□□□□ -1.6
RPN3	YER021W	LSO1	Q3E827	93 aa		5.05	□□□□□ -1.6
RPN3	YER021W	TRL1	P09880	827 aa	Known RBP	5.04	□□□□□ -1.6
RPN3	YER021W	MCX1	P38323	520 aa	Predicted RBP	5.04	□□□□□ -1.6
RPN3	YER021W	SSF1	P38789	453 aa	Predicted RBP	5.04	□□□□□ -1.6
RPN3	YER021W	YBL113C	Q7M4S9	792 aa		5.04	□□□□□ -1.6
RPN3	YER021W	VMA3	P25515	160 aa		5.04	□□□□□ -1.6
RPN3	YER021W	KTR2	P33550	425 aa		5.04	□□□□□ -1.6
RPN3	YER021W	ERP5	P38819	212 aa		5.04	□□□□□ -1.6
RPN3	YER021W	APC11	Q12157	165 aa		5.04	□□□□□ -1.6
RPN3	YER021W	GLO3	P38682	493 aa	Known RBP	5.03	□□□□□ -1.6
RPN3	YER021W	QDR2	P40474	542 aa		5.03	□□□□□ -1.6
RPN3	YER021W	MTO1	P53070	669 aa		5.03	□□□□□ -1.6
RPN3	YER021W	ATG1	P53104	897 aa		5.03	□□□□□ -1.6
RPN3	YER021W	RPB10	P22139	70 aa		5.02	□□□□□ -1.61
RPN3	YER021W	KAP122	P32767	1081 aa		5.02	□□□□□ -1.61
RPN3	YER021W	YNR014W	P53719	212 aa		5.02	□□□□□ -1.61
RPN3	YER021W	YML020W	Q03722	664 aa		5.02	□□□□□ -1.61
RPN3	YER021W	RGP1	P16664	663 aa		5.01	□□□□□ -1.61
RPN3	YER021W	RPC31	P17890	251 aa		5.01	□□□□□ -1.61
RPN3	YER021W	MRPL16	P38064	232 aa		5.01	□□□□□ -1.61
RPN3	YER021W	SLN1	P39928	1220 aa	Predicted RBP	5.01	□□□□□ -1.61
RPN3	YER021W	QDR1	P40475	563 aa		5.01	□□□□□ -1.61
RPN3	YER021W	GRS1	P38088	690 aa	Known RBP	5	□□□□□ -1.61
RPN3	YER021W	AMN1	P38285	549 aa	Predicted RBP	5	□□□□□ -1.61
RPN3	YER021W	DYS1	P38791	387 aa		5	□□□□□ -1.61
RPN3	YER021W	MDJ2	P42834	146 aa		5	□□□□□ -1.61
RPN3	YER021W	YDR215C	Q12240	137 aa		5	□□□□□ -1.61
RPN3	YER021W	STB3	Q12427	513 aa		5	□□□□□ -1.61
RPN3	YER021W	ATG2	P53855	1592 aa		5	□□□□□ -1.61
RPN3	YER021W	GPM1	P00950	247 aa	Known RBP	4.99	□□□□□ -1.61
RPN3	YER021W	LDH1	P38139	375 aa		4.99	□□□□□ -1.61
RPN3	YER021W	CUS1	Q02554	436 aa	Predicted RBP	4.99	□□□□□ -1.61
RPN3	YER021W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
RPN3	YER021W	SPR3	P41901	512 aa		4.99	□□□□□ -1.61
RPN3	YER021W	ACF4	P47129	309 aa		4.99	□□□□□ -1.61
RPN3	YER021W	SKP1	P52286	194 aa		4.99	□□□□□ -1.61
RPN3	YER021W	SUT1	P53032	299 aa	Known RBP	4.99	□□□□□ -1.61
RPN3	YER021W	NOP8	Q08287	484 aa	Predicted RBP	4.99	□□□□□ -1.61
RPN3	YER021W	MCA1	Q08601	432 aa		4.99	□□□□□ -1.61
RPN3	YER021W	BSD2	P38356	321 aa		4.98	□□□□□ -1.61
RPN3	YER021W	HXT8	P40886	569 aa		4.98	□□□□□ -1.61
RPN3	YER021W	YCF1	P39109	1515 aa	Known RBP	4.97	□□□□□ -1.61
RPN3	YER021W	MSN1	P22148	382 aa		4.97	□□□□□ -1.61
RPN3	YER021W	BOI2	P39969	1040 aa		4.97	□□□□□ -1.61
RPN3	YER021W	YOR296W	Q08748	1289 aa		4.97	□□□□□ -1.61
RPN3	YER021W	GIP1	P38229	639 aa		4.96	□□□□□ -1.62
RPN3	YER021W	FRT1	Q99332	602 aa		4.96	□□□□□ -1.62
RPN3	YER021W	GLT1	Q12680	2145 aa	Known RBP	4.96	□□□□□ -1.62
RPN3	YER021W	YHL050C	P38721	697 aa		4.95	□□□□□ -1.62
RPN3	YER021W	YHR219W	P38900	624 aa		4.95	□□□□□ -1.62
RPN3	YER021W	LSB6	P42951	607 aa		4.95	□□□□□ -1.62
RPN3	YER021W	SEN54	Q02825	467 aa	Predicted RBP	4.95	□□□□□ -1.62
RPN3	YER021W	NUT2	Q06213	157 aa		4.95	□□□□□ -1.62
RPN3	YER021W	ISW1	P38144	1129 aa		4.95	□□□□□ -1.62
RPN3	YER021W	MSC7	P38694	644 aa		4.95	□□□□□ -1.62
RPN3	YER021W	APM2	P38700	605 aa		4.95	□□□□□ -1.62
RPN3	YER021W	STM1	P39015	273 aa	Known RBP	4.95	□□□□□ -1.62
RPN3	YER021W	RGD2	P43556	714 aa		4.95	□□□□□ -1.62
RPN3	YER021W	YNR040W	P53736	256 aa		4.95	□□□□□ -1.62
RPN3	YER021W	TRS120	Q04183	1289 aa		4.95	□□□□□ -1.62
RPN3	YER021W	XRN1	P22147	1528 aa	Known RBP	4.94	□□□□□ -1.62
RPN3	YER021W	FPS1	P23900	669 aa		4.94	□□□□□ -1.62
RPN3	YER021W	ITC1	P53125	1264 aa		4.94	□□□□□ -1.62
RPN3	YER021W	UFD2	P54860	961 aa		4.94	□□□□□ -1.62
RPN3	YER021W	RPP1A	P05318	106 aa	Predicted RBP	4.93	□□□□□ -1.62
RPN3	YER021W	SMC1	P32908	1225 aa		4.93	□□□□□ -1.62
RPN3	YER021W	NCL1	P38205	684 aa	Known RBP	4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 61.3 ms