RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W LDH1P38139 375 aa4.8□□□□□ -1.64
SHS1YDL225W QDR2P40474 542 aa4.8□□□□□ -1.64
SHS1YDL225W SPR3P41901 512 aa4.8□□□□□ -1.64
SHS1YDL225W YGR035CP53222 116 aa4.8□□□□□ -1.64
SHS1YDL225W RPP1AP05318 106 aaPredicted RBP4.8□□□□□ -1.64
SHS1YDL225W RPB10P22139 70 aa4.8□□□□□ -1.64
SHS1YDL225W SEC20P28791 383 aa4.8□□□□□ -1.64
SHS1YDL225W KAP122P32767 1081 aa4.8□□□□□ -1.64
SHS1YDL225W MTO1P53070 669 aa4.8□□□□□ -1.64
SHS1YDL225W YMR265CQ03508 461 aaKnown RBP4.8□□□□□ -1.64
SHS1YDL225W NUT2Q06213 157 aa4.8□□□□□ -1.64
SHS1YDL225W YDL176WQ12027 708 aa4.8□□□□□ -1.64
SHS1YDL225W FRT1Q99332 602 aa4.8□□□□□ -1.64
SHS1YDL225W KTR2P33550 425 aa4.79□□□□□ -1.64
SHS1YDL225W DYS1P38791 387 aa4.79□□□□□ -1.64
SHS1YDL225W HXT8P40886 569 aa4.79□□□□□ -1.64
SHS1YDL225W LYS5P50113 272 aa4.79□□□□□ -1.64
SHS1YDL225W LEU1P07264 779 aaKnown RBP4.78□□□□□ -1.64
SHS1YDL225W CEM1P39525 442 aa4.78□□□□□ -1.64
SHS1YDL225W ALD2P47771 506 aa4.78□□□□□ -1.64
SHS1YDL225W TRS120Q04183 1289 aa4.78□□□□□ -1.64
SHS1YDL225W THI12P42883 340 aa4.77□□□□□ -1.65
SHS1YDL225W THI5P43534 340 aa4.77□□□□□ -1.65
SHS1YDL225W THI11P47183 340 aa4.77□□□□□ -1.65
SHS1YDL225W THI13Q07748 340 aa4.77□□□□□ -1.65
SHS1YDL225W MSN1P22148 382 aa4.77□□□□□ -1.65
SHS1YDL225W PPX1P38698 397 aa4.77□□□□□ -1.65
SHS1YDL225W FIR1P40020 876 aa4.77□□□□□ -1.65
SHS1YDL225W CUZ1P53899 274 aa4.77□□□□□ -1.65
SHS1YDL225W KRE33P53914 1056 aaKnown RBP4.77□□□□□ -1.65
SHS1YDL225W UFD2P54860 961 aa4.77□□□□□ -1.65
SHS1YDL225W NAM8Q00539 523 aaKnown RBP4.77□□□□□ -1.65
SHS1YDL225W HPF1Q05164 967 aa4.77□□□□□ -1.65
SHS1YDL225W WHI5Q12416 295 aa4.77□□□□□ -1.65
SHS1YDL225W DPH6Q12429 685 aa4.77□□□□□ -1.65
SHS1YDL225W RPC31P17890 251 aa4.76□□□□□ -1.65
SHS1YDL225W DIT1P21623 536 aa4.76□□□□□ -1.65
SHS1YDL225W TRK2P28584 889 aa4.76□□□□□ -1.65
SHS1YDL225W NAB2P32505 525 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
SHS1YDL225W SMC1P32908 1225 aa4.76□□□□□ -1.65
SHS1YDL225W MRPL16P38064 232 aa4.76□□□□□ -1.65
SHS1YDL225W ADE12P80210 433 aaKnown RBP4.76□□□□□ -1.65
SHS1YDL225W MNL2Q12205 849 aa4.76□□□□□ -1.65
SHS1YDL225W RGP1P16664 663 aa4.75□□□□□ -1.65
SHS1YDL225W GPI13Q07830 1017 aa4.75□□□□□ -1.65
SHS1YDL225W FPS1P23900 669 aa4.74□□□□□ -1.65
SHS1YDL225W ISW1P38144 1129 aa4.74□□□□□ -1.65
SHS1YDL225W GIP1P38229 639 aa4.74□□□□□ -1.65
SHS1YDL225W RGD2P43556 714 aa4.74□□□□□ -1.65
SHS1YDL225W CUS1Q02554 436 aaPredicted RBP4.74□□□□□ -1.65
SHS1YDL225W BSD2P38356 321 aa4.73□□□□□ -1.65
SHS1YDL225W RAD55P38953 406 aa4.73□□□□□ -1.65
SHS1YDL225W NTA1P40354 457 aa4.73□□□□□ -1.65
SHS1YDL225W SKP1P52286 194 aa4.73□□□□□ -1.65
SHS1YDL225W YNL011CP53980 444 aa4.73□□□□□ -1.65
SHS1YDL225W YOR296WQ08748 1289 aa4.73□□□□□ -1.65
SHS1YDL225W STB3Q12427 513 aa4.73□□□□□ -1.65
SHS1YDL225W MET4P32389 672 aa4.73□□□□□ -1.65
SHS1YDL225W APM2P38700 605 aa4.73□□□□□ -1.65
SHS1YDL225W YBR287WP38355 427 aa4.72□□□□□ -1.65
SHS1YDL225W POL32P47110 350 aa4.72□□□□□ -1.65
SHS1YDL225W RSC4Q02206 625 aa4.72□□□□□ -1.65
SHS1YDL225W TIF6Q12522 245 aaKnown RBP4.72□□□□□ -1.65
SHS1YDL225W ATE1P16639 503 aa4.71□□□□□ -1.66
SHS1YDL225W IRS4P36115 615 aaKnown RBP4.71□□□□□ -1.66
SHS1YDL225W PSY2P40164 858 aa4.71□□□□□ -1.66
SHS1YDL225W YNR040WP53736 256 aa4.71□□□□□ -1.66
SHS1YDL225W CDC55Q00362 526 aa4.71□□□□□ -1.66
SHS1YDL225W CCP1P00431 361 aa4.7□□□□□ -1.66
SHS1YDL225W ITC1P53125 1264 aa4.7□□□□□ -1.66
SHS1YDL225W YDR461C-AQ2V2P7 80 aa4.7□□□□□ -1.66
SHS1YDL225W PHO4P07270 312 aaKnown RBP4.7□□□□□ -1.66
SHS1YDL225W ASF1P32447 279 aa4.7□□□□□ -1.66
SHS1YDL225W NCL1P38205 684 aaKnown RBP4.7□□□□□ -1.66
SHS1YDL225W AIM46P38885 310 aa4.7□□□□□ -1.66
SHS1YDL225W EMG1Q06287 252 aaKnown RBP4.7□□□□□ -1.66
SHS1YDL225W YIL165CP40446 119 aa4.69□□□□□ -1.66
SHS1YDL225W BSC2Q05611 235 aa4.69□□□□□ -1.66
SHS1YDL225W RRP15Q06511 250 aaPredicted RBP4.69□□□□□ -1.66
SHS1YDL225W SYT1Q06836 1226 aa4.69□□□□□ -1.66
SHS1YDL225W MGE1P38523 228 aa4.68□□□□□ -1.66
SHS1YDL225W DAK2P43550 591 aa4.67□□□□□ -1.66
SHS1YDL225W SAM37P50110 327 aa4.67□□□□□ -1.66
SHS1YDL225W JJJ3P47138 172 aa4.67□□□□□ -1.66
SHS1YDL225W HEH2Q03281 663 aa4.67□□□□□ -1.66
SHS1YDL225W NOC3Q07896 663 aaPredicted RBP4.67□□□□□ -1.66
SHS1YDL225W AI1P03875 834 aa4.66□□□□□ -1.66
SHS1YDL225W GCD6P32501 712 aaKnown RBP4.66□□□□□ -1.66
SHS1YDL225W SEC8P32855 1065 aa4.66□□□□□ -1.66
SHS1YDL225W RPT1P33299 467 aaKnown RBP4.66□□□□□ -1.66
SHS1YDL225W MSC7P38694 644 aa4.66□□□□□ -1.66
SHS1YDL225W SNU71P53207 620 aaKnown RBP4.66□□□□□ -1.66
SHS1YDL225W VPS35P34110 944 aa4.65□□□□□ -1.66
SHS1YDL225W YHL008CP38750 627 aa4.65□□□□□ -1.66
SHS1YDL225W CIC1P38779 376 aaKnown RBP4.65□□□□□ -1.66
SHS1YDL225W CTR9P89105 1077 aa4.65□□□□□ -1.66
SHS1YDL225W INP54Q08227 384 aaKnown RBP4.65□□□□□ -1.66
SHS1YDL225W THI72Q08579 599 aa4.65□□□□□ -1.66
SHS1YDL225W IDI1P15496 288 aa4.64□□□□□ -1.67
SHS1YDL225W MET1P36150 593 aa4.64□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 67.5 ms