RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C MCM16Q12262 181 aa7.01□□□□□ -1.29
SCM3YDL139C TY1B-NL2Q99337 1749 aaKnown RBP7.01□□□□□ -1.29
SCM3YDL139C RTC1Q08281 1341 aa7.01□□□□□ -1.29
SCM3YDL139C DLD1P32891 587 aa7□□□□□ -1.29
SCM3YDL139C TAF5P38129 798 aa7□□□□□ -1.29
SCM3YDL139C YLR419WQ06698 1435 aaKnown RBP7□□□□□ -1.29
SCM3YDL139C BCK1Q01389 1478 aa6.99□□□□□ -1.29
SCM3YDL139C FBP26P32604 452 aa6.99□□□□□ -1.29
SCM3YDL139C IPL1P38991 367 aa6.99□□□□□ -1.29
SCM3YDL139C YLR346CQ06139 101 aa6.99□□□□□ -1.29
SCM3YDL139C ATG20Q07528 640 aa6.99□□□□□ -1.29
SCM3YDL139C CPS1P27614 576 aa6.98□□□□□ -1.29
SCM3YDL139C TTI1P36097 1038 aa6.98□□□□□ -1.29
SCM3YDL139C YAP3P38749 330 aa6.98□□□□□ -1.29
SCM3YDL139C BDS1Q08347 646 aa6.98□□□□□ -1.29
SCM3YDL139C YIL177CP40434 1758 aa6.97□□□□□ -1.29
SCM3YDL139C YJL225CP40889 1758 aa6.97□□□□□ -1.29
SCM3YDL139C ENO1P00924 437 aaKnown RBP6.97□□□□□ -1.29
SCM3YDL139C LSC2P53312 427 aa6.97□□□□□ -1.29
SCM3YDL139C SPT7P35177 1332 aa6.97□□□□□ -1.29
SCM3YDL139C NOP7P53261 605 aaKnown RBP6.96□□□□□ -1.3
SCM3YDL139C CAF120P53836 1060 aa6.96□□□□□ -1.3
SCM3YDL139C YDL176WQ12027 708 aa6.96□□□□□ -1.3
SCM3YDL139C KRE5P22023 1365 aa6.95□□□□□ -1.3
SCM3YDL139C MIP1P15801 1254 aa6.95□□□□□ -1.3
SCM3YDL139C SSA4P22202 642 aaKnown RBP6.95□□□□□ -1.3
SCM3YDL139C YJR098CP47139 656 aa6.95□□□□□ -1.3
SCM3YDL139C RIM21P48565 533 aa6.95□□□□□ -1.3
SCM3YDL139C ISU1Q03020 165 aa6.95□□□□□ -1.3
SCM3YDL139C MRX10Q05648 414 aa6.95□□□□□ -1.3
SCM3YDL139C YML133CQ03099 1374 aa6.95□□□□□ -1.3
SCM3YDL139C YLL067CQ07888 1374 aa6.95□□□□□ -1.3
SCM3YDL139C YLL066CQ99208 1374 aa6.95□□□□□ -1.3
SCM3YDL139C STE6P12866 1290 aa6.94□□□□□ -1.3
SCM3YDL139C GLY1P37303 387 aaKnown RBP6.94□□□□□ -1.3
SCM3YDL139C ISR1Q06098 443 aaKnown RBP6.94□□□□□ -1.3
SCM3YDL139C TCB1Q12466 1186 aa6.94□□□□□ -1.3
SCM3YDL139C SSA1P10591 642 aaKnown RBP6.93□□□□□ -1.3
SCM3YDL139C SCW11P53189 542 aa6.93□□□□□ -1.3
SCM3YDL139C TY4B-HP0C2J7 1802 aa6.92□□□□□ -1.3
SCM3YDL139C TY4B-JP47024 1803 aa6.92□□□□□ -1.3
SCM3YDL139C POL5P39985 1022 aaKnown RBP6.92□□□□□ -1.3
SCM3YDL139C MRX12P47084 519 aa6.92□□□□□ -1.3
SCM3YDL139C CAB1Q04430 367 aa6.92□□□□□ -1.3
SCM3YDL139C TY1A-BLQ12266 440 aa6.91□□□□□ -1.3
SCM3YDL139C MLP1Q02455 1875 aaKnown RBP6.9□□□□□ -1.3
SCM3YDL139C SOH1P38633 127 aa6.9□□□□□ -1.3
SCM3YDL139C ACO2P39533 789 aa6.9□□□□□ -1.3
SCM3YDL139C APL6P46682 809 aa6.9□□□□□ -1.3
SCM3YDL139C KIP3P53086 805 aaKnown RBP6.9□□□□□ -1.3
SCM3YDL139C UBP2Q01476 1272 aa6.9□□□□□ -1.3
SCM3YDL139C RDS2P19541 446 aaKnown RBP6.89□□□□□ -1.31
SCM3YDL139C GEF1P37020 779 aa6.89□□□□□ -1.31
SCM3YDL139C HAL5P38970 855 aaKnown RBP6.89□□□□□ -1.31
SCM3YDL139C YIR007WP40566 764 aa6.89□□□□□ -1.31
SCM3YDL139C YPP1P46951 817 aa6.89□□□□□ -1.31
SCM3YDL139C NOB1Q08444 459 aaKnown RBP6.89□□□□□ -1.31
SCM3YDL139C HAP1P0CE41 1502 aa6.89□□□□□ -1.31
SCM3YDL139C DAT1P13483 248 aaKnown RBP6.88□□□□□ -1.31
SCM3YDL139C PAF1P38351 445 aa6.88□□□□□ -1.31
SCM3YDL139C DLD3P39976 496 aaKnown RBP6.87□□□□□ -1.31
SCM3YDL139C WTM2Q12206 467 aa6.87□□□□□ -1.31
SCM3YDL139C MHP1P43638 1398 aa6.86□□□□□ -1.31
SCM3YDL139C PUP1P25043 261 aa6.86□□□□□ -1.31
SCM3YDL139C UTR2P32623 467 aa6.86□□□□□ -1.31
SCM3YDL139C PEP12P32854 288 aa6.86□□□□□ -1.31
SCM3YDL139C SIS2P36024 562 aa6.86□□□□□ -1.31
SCM3YDL139C TAF8Q03750 510 aa6.86□□□□□ -1.31
SCM3YDL139C YML083CQ04526 418 aa6.86□□□□□ -1.31
SCM3YDL139C CFT1Q06632 1357 aaKnown RBP6.85□□□□□ -1.31
SCM3YDL139C RRP5Q05022 1729 aaKnown RBP6.85□□□□□ -1.31
SCM3YDL139C PPH3P32345 308 aa6.85□□□□□ -1.31
SCM3YDL139C ALD4P46367 519 aaKnown RBP6.85□□□□□ -1.31
SCM3YDL139C RPP2BP02400 110 aaKnown RBP6.84□□□□□ -1.31
SCM3YDL139C SPE2P21182 396 aa6.84□□□□□ -1.31
SCM3YDL139C TGL4P36165 910 aa6.84□□□□□ -1.31
SCM3YDL139C OSH7P38755 437 aa6.84□□□□□ -1.31
SCM3YDL139C ATG3P40344 310 aa6.84□□□□□ -1.31
SCM3YDL139C SPT2P06843 333 aaPredicted RBP6.83□□□□□ -1.32
SCM3YDL139C KTR7P40504 517 aa6.83□□□□□ -1.32
SCM3YDL139C YEF3P16521 1044 aaKnown RBP6.82□□□□□ -1.32
SCM3YDL139C UTP7P40055 554 aaKnown RBP6.82□□□□□ -1.32
SCM3YDL139C RIA1P53893 1110 aa6.82□□□□□ -1.32
SCM3YDL139C MAK10Q02197 733 aa6.82□□□□□ -1.32
SCM3YDL139C UTP13Q05946 817 aaKnown RBP6.82□□□□□ -1.32
SCM3YDL139C RGA2Q06407 1009 aa6.82□□□□□ -1.32
SCM3YDL139C HDA3Q06623 655 aa6.82□□□□□ -1.32
SCM3YDL139C TBS1P38114 1094 aa6.81□□□□□ -1.32
SCM3YDL139C ROG3P43602 733 aa6.81□□□□□ -1.32
SCM3YDL139C RCM1P53972 490 aa6.8□□□□□ -1.32
SCM3YDL139C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
SCM3YDL139C CDC19P00549 500 aaKnown RBP6.79□□□□□ -1.32
SCM3YDL139C ESL2P36168 1195 aa6.79□□□□□ -1.32
SCM3YDL139C TY1A-MR1Q04215 440 aa6.79□□□□□ -1.32
SCM3YDL139C PDS5Q04264 1277 aa6.79□□□□□ -1.32
SCM3YDL139C YRF1-2P40105 1681 aa6.79□□□□□ -1.32
SCM3YDL139C RPL34AP87262 121 aaPredicted RBP6.78□□□□□ -1.32
SCM3YDL139C ECM23Q02710 187 aa6.78□□□□□ -1.32
SCM3YDL139C SNF2P22082 1703 aa6.78□□□□□ -1.32
SCM3YDL139C URB1P34241 1764 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms