RNA–Protein interactions for RNA: YCR068W

ATG15, Transcript of Lipase required for intravacuolar lysis of autophagic and Cvt bodies, yeast

Gene ATG15, Length 1,563 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG15	YCR068W	PBY1	P38254	753 aa		11.66	□□□□□ -0.54
ATG15	YCR068W	YER156C	P40093	338 aa	Known RBP	11.66	□□□□□ -0.54
ATG15	YCR068W	PIB2	P53191	635 aa		11.66	□□□□□ -0.54
ATG15	YCR068W	PSF3	Q12146	194 aa		11.66	□□□□□ -0.54
ATG15	YCR068W	STM1	P39015	273 aa	Known RBP	11.65	□□□□□ -0.54
ATG15	YCR068W	HXT13	P39924	564 aa		11.65	□□□□□ -0.54
ATG15	YCR068W	HXT17	P53631	564 aa		11.65	□□□□□ -0.54
ATG15	YCR068W	IRC4	Q03036	179 aa		11.65	□□□□□ -0.54
ATG15	YCR068W	OPI1	P21957	404 aa		11.63	□□□□□ -0.55
ATG15	YCR068W	RET1	P22276	1149 aa	Known RBP	11.63	□□□□□ -0.55
ATG15	YCR068W	LCB1	P25045	558 aa	Known RBP	11.63	□□□□□ -0.55
ATG15	YCR068W	FAS2	P19097	1887 aa	Known RBP	11.63	□□□□□ -0.55
ATG15	YCR068W	HKR1	P41809	1802 aa		11.63	□□□□□ -0.55
ATG15	YCR068W	NPL4	P33755	580 aa		11.62	□□□□□ -0.55
ATG15	YCR068W	CYB2	P00175	591 aa		11.62	□□□□□ -0.55
ATG15	YCR068W	RPS9B	P05755	195 aa	Known RBP	11.62	□□□□□ -0.55
ATG15	YCR068W	TPM1	P17536	199 aa	Known RBP	11.62	□□□□□ -0.55
ATG15	YCR068W	YKU70	P32807	602 aa		11.62	□□□□□ -0.55
ATG15	YCR068W	GEF1	P37020	779 aa		11.62	□□□□□ -0.55
ATG15	YCR068W	OPY1	P38271	328 aa		11.62	□□□□□ -0.55
ATG15	YCR068W	BBC1	P47068	1157 aa		11.62	□□□□□ -0.55
ATG15	YCR068W	YIR042C	P40586	236 aa		11.61	□□□□□ -0.55
ATG15	YCR068W	INM2	Q05533	292 aa		11.61	□□□□□ -0.55
ATG15	YCR068W	YMR147W	P40218	223 aa	Known RBP	11.6	□□□□□ -0.55
ATG15	YCR068W	SET4	P42948	560 aa		11.6	□□□□□ -0.55
ATG15	YCR068W	ENP2	P48234	707 aa	Known RBP	11.6	□□□□□ -0.55
ATG15	YCR068W	ICL1	P28240	557 aa	Predicted RBP	11.59	□□□□□ -0.55
ATG15	YCR068W	TIF4632	P39936	914 aa	Known RBP	11.59	□□□□□ -0.55
ATG15	YCR068W	PKH3	Q03306	898 aa	Predicted RBP	11.59	□□□□□ -0.55
ATG15	YCR068W	YFH7	P43591	353 aa		11.58	□□□□□ -0.55
ATG15	YCR068W	JJJ2	P46997	583 aa		11.58	□□□□□ -0.55
ATG15	YCR068W	KAR5	Q04746	504 aa		11.58	□□□□□ -0.55
ATG15	YCR068W	LAM4	P38800	1345 aa		11.58	□□□□□ -0.56
ATG15	YCR068W	IRC8	P47046	822 aa		11.58	□□□□□ -0.56
ATG15	YCR068W	WRS1	Q12109	432 aa	Known RBP	11.58	□□□□□ -0.56
ATG15	YCR068W	TAH18	Q12181	623 aa		11.58	□□□□□ -0.56
ATG15	YCR068W	TRL1	P09880	827 aa	Known RBP	11.57	□□□□□ -0.56
ATG15	YCR068W	RNR2	P09938	399 aa	Known RBP	11.57	□□□□□ -0.56
ATG15	YCR068W	PCT1	P13259	424 aa		11.57	□□□□□ -0.56
ATG15	YCR068W	GRX7	P38068	203 aa		11.57	□□□□□ -0.56
ATG15	YCR068W	SHC1	P39000	512 aa		11.57	□□□□□ -0.56
ATG15	YCR068W	IOC3	P43596	787 aa		11.57	□□□□□ -0.56
ATG15	YCR068W	PRP42	Q03776	544 aa	Known RBP	11.57	□□□□□ -0.56
ATG15	YCR068W	RPT3	P33298	428 aa	Known RBP	11.56	□□□□□ -0.56
ATG15	YCR068W	PTK1	P36002	662 aa	Predicted RBP	11.56	□□□□□ -0.56
ATG15	YCR068W	SPO22	P40511	975 aa		11.56	□□□□□ -0.56
ATG15	YCR068W	DPL1	Q05567	589 aa		11.56	□□□□□ -0.56
ATG15	YCR068W	TOS4	Q06266	489 aa		11.56	□□□□□ -0.56
ATG15	YCR068W	RLF2	Q12495	606 aa		11.56	□□□□□ -0.56
ATG15	YCR068W	MET1	P36150	593 aa		11.55	□□□□□ -0.56
ATG15	YCR068W	BOI1	P38041	980 aa	Known RBP	11.55	□□□□□ -0.56
ATG15	YCR068W	ARG82	P07250	355 aa		11.54	□□□□□ -0.56
ATG15	YCR068W	SSF2	Q12153	453 aa	Predicted RBP	11.54	□□□□□ -0.56
ATG15	YCR068W	DIP2	Q12220	943 aa	Predicted RBP	11.54	□□□□□ -0.56
ATG15	YCR068W	SNF3	P10870	884 aa		11.54	□□□□□ -0.56
ATG15	YCR068W	SRS2	P12954	1174 aa		11.54	□□□□□ -0.56
ATG15	YCR068W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	11.54	□□□□□ -0.56	not detected
ATG15	YCR068W	AIM9	P40053	627 aa	Known RBP	11.54	□□□□□ -0.56
ATG15	YCR068W	GAS5	Q08193	484 aa		11.54	□□□□□ -0.56
ATG15	YCR068W	RRG1	Q12167	365 aa	Predicted RBP	11.53	□□□□□ -0.56
ATG15	YCR068W	TOP1	P04786	769 aa		11.52	□□□□□ -0.57
ATG15	YCR068W	MDL2	P33311	773 aa		11.52	□□□□□ -0.57
ATG15	YCR068W	GSM1	P42950	618 aa		11.52	□□□□□ -0.57
ATG15	YCR068W	ACK1	Q07622	623 aa	Predicted RBP	11.52	□□□□□ -0.57
ATG15	YCR068W	IME2	P32581	645 aa		11.51	□□□□□ -0.57
ATG15	YCR068W	PPM2	Q08282	695 aa		11.51	□□□□□ -0.57
ATG15	YCR068W	KRI1	P42846	591 aa	Known RBP	11.5	□□□□□ -0.57
ATG15	YCR068W	APL6	P46682	809 aa		11.5	□□□□□ -0.57
ATG15	YCR068W	FLO1	P32768	1537 aa		11.5	□□□□□ -0.57
ATG15	YCR068W	CIC1	P38779	376 aa	Known RBP	11.5	□□□□□ -0.57
ATG15	YCR068W	PIP2	P52960	996 aa		11.5	□□□□□ -0.57
ATG15	YCR068W	PEP3	P27801	918 aa		11.49	□□□□□ -0.57
ATG15	YCR068W	CRG1	P38892	291 aa	RIP-Chip data	11.49	□□□□□ -0.57	not detected
ATG15	YCR068W	RRP8	P38961	392 aa	Known RBP	11.49	□□□□□ -0.57
ATG15	YCR068W	PUS6	P53294	404 aa		11.49	□□□□□ -0.57
ATG15	YCR068W	FPK1	P53739	893 aa		11.49	□□□□□ -0.57
ATG15	YCR068W	ATG20	Q07528	640 aa		11.49	□□□□□ -0.57
ATG15	YCR068W	LSP1	Q12230	341 aa	Known RBP	11.49	□□□□□ -0.57
ATG15	YCR068W	COQ1	P18900	473 aa		11.48	□□□□□ -0.57
ATG15	YCR068W	RPS7A	P26786	190 aa	Known RBP	11.48	□□□□□ -0.57
ATG15	YCR068W	AFG2	P32794	780 aa		11.48	□□□□□ -0.57
ATG15	YCR068W	CRF1	Q04930	467 aa		11.48	□□□□□ -0.57
ATG15	YCR068W	SPN1	Q06505	410 aa	Predicted RBP	11.48	□□□□□ -0.57
ATG15	YCR068W	FLO11	P08640	1367 aa		11.48	□□□□□ -0.57
ATG15	YCR068W	SSA1	P10591	642 aa	Known RBP	11.46	□□□□□ -0.57
ATG15	YCR068W	MSM1	P22438	575 aa		11.46	□□□□□ -0.57
ATG15	YCR068W	SLN1	P39928	1220 aa	Predicted RBP	11.46	□□□□□ -0.57
ATG15	YCR068W	IMP2'	P32351	346 aa		11.45	□□□□□ -0.58
ATG15	YCR068W	VPS24	P36095	224 aa	Known RBP	11.45	□□□□□ -0.58
ATG15	YCR068W	RTS1	P38903	757 aa		11.45	□□□□□ -0.58
ATG15	YCR068W	SQS1	P53866	767 aa	Known RBP	11.45	□□□□□ -0.58
ATG15	YCR068W	PGA3	Q12746	312 aa	Known RBP	11.45	□□□□□ -0.58
ATG15	YCR068W	RER2	P35196	286 aa		11.44	□□□□□ -0.58
ATG15	YCR068W	UFD2	P54860	961 aa		11.44	□□□□□ -0.58
ATG15	YCR068W	RPS15	Q01855	142 aa	Known RBP	11.44	□□□□□ -0.58
ATG15	YCR068W	VPS20	Q04272	221 aa		11.44	□□□□□ -0.58
ATG15	YCR068W	ESF1	Q06344	628 aa	Known RBP	11.44	□□□□□ -0.58
ATG15	YCR068W	SIS2	P36024	562 aa		11.43	□□□□□ -0.58
ATG15	YCR068W	NPA3	P47122	385 aa		11.43	□□□□□ -0.58
ATG15	YCR068W	NSG2	P53898	299 aa		11.43	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms