RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W TY1A-DR3Q12441 440 aa7.26□□□□□ -1.25
CKS1YBR135W SRF1Q12516 437 aa7.26□□□□□ -1.25
CKS1YBR135W IRE1P32361 1115 aa7.25□□□□□ -1.25
CKS1YBR135W DAL1P32375 460 aa7.25□□□□□ -1.25
CKS1YBR135W SLA1P32790 1244 aa7.25□□□□□ -1.25
CKS1YBR135W DLD1P32891 587 aa7.25□□□□□ -1.25
CKS1YBR135W MET10P39692 1035 aa7.25□□□□□ -1.25
CKS1YBR135W YTA6P40328 754 aa7.25□□□□□ -1.25
CKS1YBR135W NUP85P46673 744 aa7.25□□□□□ -1.25
CKS1YBR135W SEC8P32855 1065 aa7.24□□□□□ -1.25
CKS1YBR135W YJR098CP47139 656 aa7.24□□□□□ -1.25
CKS1YBR135W CDC55Q00362 526 aa7.24□□□□□ -1.25
CKS1YBR135W OYE2Q03558 400 aaKnown RBP7.24□□□□□ -1.25
CKS1YBR135W YNL011CP53980 444 aa7.23□□□□□ -1.25
CKS1YBR135W MSN1P22148 382 aa7.22□□□□□ -1.25
CKS1YBR135W KAP122P32767 1081 aa7.22□□□□□ -1.25
CKS1YBR135W BRE2P43132 505 aa7.22□□□□□ -1.25
CKS1YBR135W RSC4Q02206 625 aa7.22□□□□□ -1.25
CKS1YBR135W PSH1Q12161 406 aa7.22□□□□□ -1.25
CKS1YBR135W RPC31P17890 251 aa7.21□□□□□ -1.26
CKS1YBR135W PDC6P26263 563 aaKnown RBP7.21□□□□□ -1.26
CKS1YBR135W GCD6P32501 712 aaKnown RBP7.21□□□□□ -1.26
CKS1YBR135W NTA1P40354 457 aa7.21□□□□□ -1.26
CKS1YBR135W RGD2P43556 714 aa7.21□□□□□ -1.26
CKS1YBR135W LSC2P53312 427 aa7.21□□□□□ -1.26
CKS1YBR135W SVF1Q05515 481 aa7.21□□□□□ -1.26
CKS1YBR135W LEU1P07264 779 aaKnown RBP7.2□□□□□ -1.26
CKS1YBR135W RAD55P38953 406 aa7.2□□□□□ -1.26
CKS1YBR135W DAK2P43550 591 aa7.2□□□□□ -1.26
CKS1YBR135W GAR1P28007 205 aaKnown RBP7.19□□□□□ -1.26
CKS1YBR135W RPT1P33299 467 aaKnown RBP7.19□□□□□ -1.26
CKS1YBR135W VPS35P34110 944 aa7.19□□□□□ -1.26
CKS1YBR135W MET1P36150 593 aa7.19□□□□□ -1.26
CKS1YBR135W FIR1P40020 876 aa7.19□□□□□ -1.26
CKS1YBR135W FYV10P40492 516 aa7.19□□□□□ -1.26
CKS1YBR135W SAM37P50110 327 aa7.19□□□□□ -1.26
CKS1YBR135W MTO1P53070 669 aa7.19□□□□□ -1.26
CKS1YBR135W IRS4P36115 615 aaKnown RBP7.18□□□□□ -1.26
CKS1YBR135W ISW1P38144 1129 aa7.18□□□□□ -1.26
CKS1YBR135W BSD2P38356 321 aa7.18□□□□□ -1.26
CKS1YBR135W GCR2Q01722 534 aa7.18□□□□□ -1.26
CKS1YBR135W YOR296WQ08748 1289 aa7.18□□□□□ -1.26
CKS1YBR135W TIF6Q12522 245 aaKnown RBP7.18□□□□□ -1.26
CKS1YBR135W GBP2P25555 427 aaKnown RBP RIP-Chip data7.17□□□□□ -1.26not detected
CKS1YBR135W GIP1P38229 639 aa7.17□□□□□ -1.26
CKS1YBR135W PSY2P40164 858 aa7.17□□□□□ -1.26
CKS1YBR135W ORC1P54784 914 aaPredicted RBP7.17□□□□□ -1.26
CKS1YBR135W BSC2Q05611 235 aa7.17□□□□□ -1.26
CKS1YBR135W TCB1Q12466 1186 aa7.17□□□□□ -1.26
CKS1YBR135W NAB2P32505 525 aaKnown RBP RIP-Chip data7.16□□□□□ -1.26not detected
CKS1YBR135W CIC1P38779 376 aaKnown RBP7.16□□□□□ -1.26
CKS1YBR135W UBP15P50101 1230 aa7.16□□□□□ -1.26
CKS1YBR135W NOC3Q07896 663 aaPredicted RBP7.16□□□□□ -1.26
CKS1YBR135W MCM2P29469 868 aa7.15□□□□□ -1.26
CKS1YBR135W YBR287WP38355 427 aa7.15□□□□□ -1.26
CKS1YBR135W SKP1P52286 194 aa7.15□□□□□ -1.26
CKS1YBR135W CUS1Q02554 436 aaPredicted RBP7.15□□□□□ -1.26
CKS1YBR135W CDC19P00549 500 aaKnown RBP7.14□□□□□ -1.27
CKS1YBR135W RGP1P16664 663 aa7.14□□□□□ -1.27
CKS1YBR135W SPR28Q04921 423 aa7.13□□□□□ -1.27
CKS1YBR135W UBP2Q01476 1272 aa7.12□□□□□ -1.27
CKS1YBR135W RMD1Q03441 430 aa7.12□□□□□ -1.27
CKS1YBR135W AIM46P38885 310 aa7.11□□□□□ -1.27
CKS1YBR135W YGR122WP53272 402 aa7.11□□□□□ -1.27
CKS1YBR135W TOS4Q06266 489 aa7.11□□□□□ -1.27
CKS1YBR135W OXR1Q08952 273 aa7.11□□□□□ -1.27
CKS1YBR135W FLP1P03870 423 aa7.1□□□□□ -1.27
CKS1YBR135W NAP1P25293 417 aaKnown RBP7.1□□□□□ -1.27
CKS1YBR135W RPS26AP39938 119 aaKnown RBP7.1□□□□□ -1.27
CKS1YBR135W RPS26BP39939 119 aaKnown RBP7.1□□□□□ -1.27
CKS1YBR135W ITC1P53125 1264 aa7.1□□□□□ -1.27
CKS1YBR135W YLR346CQ06139 101 aa7.1□□□□□ -1.27
CKS1YBR135W JIP5Q06214 492 aaPredicted RBP7.1□□□□□ -1.27
CKS1YBR135W EMG1Q06287 252 aaKnown RBP7.1□□□□□ -1.27
CKS1YBR135W OPT2Q06593 877 aa7.1□□□□□ -1.27
CKS1YBR135W INP54Q08227 384 aaKnown RBP7.1□□□□□ -1.27
CKS1YBR135W GLY1P37303 387 aaKnown RBP7.09□□□□□ -1.27
CKS1YBR135W YHL008CP38750 627 aa7.09□□□□□ -1.27
CKS1YBR135W YIL165CP40446 119 aa7.09□□□□□ -1.27
CKS1YBR135W HXK1P04806 485 aaKnown RBP7.08□□□□□ -1.28
CKS1YBR135W CYC8P14922 966 aa7.08□□□□□ -1.28
CKS1YBR135W APM2P38700 605 aa7.08□□□□□ -1.28
CKS1YBR135W OSH7P38755 437 aa7.08□□□□□ -1.28
CKS1YBR135W CTR9P89105 1077 aa7.08□□□□□ -1.28
CKS1YBR135W ESF1Q06344 628 aaKnown RBP7.08□□□□□ -1.28
CKS1YBR135W FAA3P39002 694 aa7.07□□□□□ -1.28
CKS1YBR135W YNR040WP53736 256 aa7.07□□□□□ -1.28
CKS1YBR135W YCS4Q06156 1176 aa7.07□□□□□ -1.28
CKS1YBR135W COBP00163 385 aa7.06□□□□□ -1.28
CKS1YBR135W MRPL16P38064 232 aa7.06□□□□□ -1.28
CKS1YBR135W NAM8Q00539 523 aaKnown RBP7.06□□□□□ -1.28
CKS1YBR135W DAL4Q04895 635 aa7.06□□□□□ -1.28
CKS1YBR135W MAG2Q06436 670 aaKnown RBP7.06□□□□□ -1.28
CKS1YBR135W TY1A-BLQ12266 440 aa7.06□□□□□ -1.28
CKS1YBR135W RAD2P07276 1031 aa7.05□□□□□ -1.28
CKS1YBR135W PYC2P32327 1180 aaKnown RBP7.05□□□□□ -1.28
CKS1YBR135W PRP40P33203 583 aaKnown RBP7.05□□□□□ -1.28
CKS1YBR135W NCL1P38205 684 aaKnown RBP7.05□□□□□ -1.28
CKS1YBR135W MSH6Q03834 1242 aa7.05□□□□□ -1.28
CKS1YBR135W RPP1AP05318 106 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms