RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeastyeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC3YAL011W YJL049WP47048 450 aa5.42□□□□□ -1.54
SWC3YAL011W OYE2Q03558 400 aaKnown RBP5.42□□□□□ -1.54
SWC3YAL011W CSI1Q04368 295 aa5.42□□□□□ -1.54
SWC3YAL011W JIP5Q06214 492 aaPredicted RBP5.42□□□□□ -1.54
SWC3YAL011W YRF1-3P0CX14 1859 aa5.42□□□□□ -1.54
SWC3YAL011W YRF1-7P0CX15 1859 aa5.42□□□□□ -1.54
SWC3YAL011W YRF1-6P53819 1859 aa5.42□□□□□ -1.54
SWC3YAL011W SEC8P32855 1065 aa5.41□□□□□ -1.54
SWC3YAL011W YHL050CP38721 697 aa5.41□□□□□ -1.54
SWC3YAL011W YHR219WP38900 624 aa5.41□□□□□ -1.54
SWC3YAL011W YIR014WP40570 242 aa5.41□□□□□ -1.54
SWC3YAL011W XKS1P42826 600 aa5.41□□□□□ -1.54
SWC3YAL011W YJR107WP47145 328 aa5.41□□□□□ -1.54
SWC3YAL011W ESF2P53743 316 aaKnown RBP5.41□□□□□ -1.54
SWC3YAL011W WHI5Q12416 295 aa5.41□□□□□ -1.54
SWC3YAL011W YEL077CQ3E7X8 1277 aa5.41□□□□□ -1.54
SWC3YAL011W KAR1P11927 433 aa5.41□□□□□ -1.54
SWC3YAL011W YKL091CP33324 310 aaKnown RBP5.41□□□□□ -1.54
SWC3YAL011W TGL4P36165 910 aa5.41□□□□□ -1.54
SWC3YAL011W YPP1P46951 817 aa5.41□□□□□ -1.54
SWC3YAL011W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54 RIP-Chip
SWC3YAL011W TCB1Q12466 1186 aa5.41□□□□□ -1.54
SWC3YAL011W EDE1P34216 1381 aa5.4□□□□□ -1.54
SWC3YAL011W TRL1P09880 827 aaKnown RBP5.4□□□□□ -1.55
SWC3YAL011W PWP2P25635 923 aaKnown RBP5.4□□□□□ -1.55
SWC3YAL011W YNG2P38806 282 aaKnown RBP5.4□□□□□ -1.55
SWC3YAL011W YNL108CP53929 270 aa5.4□□□□□ -1.55
SWC3YAL011W DNM1P54861 757 aa5.4□□□□□ -1.55
SWC3YAL011W CTF4Q01454 927 aa5.4□□□□□ -1.55
SWC3YAL011W MRX10Q05648 414 aa5.4□□□□□ -1.55
SWC3YAL011W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
SWC3YAL011W EBP2P36049 427 aaKnown RBP5.39□□□□□ -1.55
SWC3YAL011W VPS24P36095 224 aaKnown RBP5.39□□□□□ -1.55
SWC3YAL011W BUD6P41697 788 aa5.39□□□□□ -1.55
SWC3YAL011W YGR122WP53272 402 aa5.39□□□□□ -1.55
SWC3YAL011W SPO1P53541 631 aa5.39□□□□□ -1.55
SWC3YAL011W NSE3Q05541 303 aa5.39□□□□□ -1.55
SWC3YAL011W ENO1P00924 437 aaKnown RBP5.39□□□□□ -1.55
SWC3YAL011W KCC4P25389 1037 aa5.39□□□□□ -1.55
SWC3YAL011W UGA3P26370 528 aa5.39□□□□□ -1.55
SWC3YAL011W YDR090CQ03193 310 aa5.39□□□□□ -1.55
SWC3YAL011W ECM16Q04217 1267 aaKnown RBP5.39□□□□□ -1.55
SWC3YAL011W COG4Q06096 861 aa5.39□□□□□ -1.55
SWC3YAL011W EAF7P53911 425 aaKnown RBP5.38□□□□□ -1.55
SWC3YAL011W ALD3P54114 506 aa5.38□□□□□ -1.55
SWC3YAL011W YGR161W-CQ3E744 92 aa5.38□□□□□ -1.55
SWC3YAL011W NUP145P49687 1317 aa5.37□□□□□ -1.55
SWC3YAL011W RPS19AP07280 144 aaKnown RBP5.37□□□□□ -1.55
SWC3YAL011W RPS19BP07281 144 aaPredicted RBP5.37□□□□□ -1.55
SWC3YAL011W RAD4P14736 754 aa5.37□□□□□ -1.55
SWC3YAL011W RAD24P32641 659 aa5.37□□□□□ -1.55
SWC3YAL011W MGE1P38523 228 aa5.37□□□□□ -1.55
SWC3YAL011W VAC8P39968 578 aa5.37□□□□□ -1.55
SWC3YAL011W MDJ2P42834 146 aa5.37□□□□□ -1.55
SWC3YAL011W SCY1P53009 804 aa5.37□□□□□ -1.55
SWC3YAL011W NKP2Q06162 153 aa5.37□□□□□ -1.55
SWC3YAL011W INP54Q08227 384 aaKnown RBP5.37□□□□□ -1.55
SWC3YAL011W SSF2Q12153 453 aaPredicted RBP5.37□□□□□ -1.55
SWC3YAL011W STI1P15705 589 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
SWC3YAL011W DPB3P27344 201 aa5.37□□□□□ -1.55
SWC3YAL011W SEC6P32844 805 aa5.37□□□□□ -1.55
SWC3YAL011W EDS1P38073 919 aa5.37□□□□□ -1.55
SWC3YAL011W RFC1P38630 861 aaKnown RBP5.37□□□□□ -1.55
SWC3YAL011W RIM21P48565 533 aa5.37□□□□□ -1.55
SWC3YAL011W UTP14Q04500 899 aaKnown RBP5.37□□□□□ -1.55
SWC3YAL011W MRP7P12687 371 aa5.36□□□□□ -1.55
SWC3YAL011W PCT1P13259 424 aa5.36□□□□□ -1.55
SWC3YAL011W SPT5P27692 1063 aaKnown RBP5.36□□□□□ -1.55
SWC3YAL011W FUI1P38196 639 aa5.36□□□□□ -1.55
SWC3YAL011W UBP12P39538 1254 aa5.36□□□□□ -1.55
SWC3YAL011W IES1P43579 692 aa5.36□□□□□ -1.55
SWC3YAL011W ZDS2P54786 942 aa5.36□□□□□ -1.55
SWC3YAL011W ALE1Q08548 619 aa5.36□□□□□ -1.55
SWC3YAL011W RSF2P46974 1380 aa5.35□□□□□ -1.55
SWC3YAL011W THS1P04801 734 aaKnown RBP5.35□□□□□ -1.55
SWC3YAL011W SWC3P31376 625 aa5.35□□□□□ -1.55
SWC3YAL011W MIF2P35201 549 aa5.35□□□□□ -1.55
SWC3YAL011W MET1P36150 593 aa5.35□□□□□ -1.55
SWC3YAL011W MNN1P39106 762 aa5.35□□□□□ -1.55
SWC3YAL011W HOS4P40480 1083 aa5.35□□□□□ -1.55
SWC3YAL011W YJR142WP47173 342 aa5.35□□□□□ -1.55
SWC3YAL011W ITC1P53125 1264 aa5.35□□□□□ -1.55
SWC3YAL011W SVL3Q03088 825 aaKnown RBP5.35□□□□□ -1.55
SWC3YAL011W LYS2P07702 1392 aa5.35□□□□□ -1.55
SWC3YAL011W ENO2P00925 437 aaKnown RBP5.34□□□□□ -1.55
SWC3YAL011W CLC1P17891 233 aa5.34□□□□□ -1.55
SWC3YAL011W PEP12P32854 288 aa5.34□□□□□ -1.55
SWC3YAL011W NFU1P32860 256 aa5.34□□□□□ -1.55
SWC3YAL011W BCH2P36122 765 aa5.34□□□□□ -1.55
SWC3YAL011W GRX7P38068 203 aa5.34□□□□□ -1.55
SWC3YAL011W KAR5Q04746 504 aa5.34□□□□□ -1.55
SWC3YAL011W PIN2Q12057 282 aa5.34□□□□□ -1.55
SWC3YAL011W ENT1Q12518 454 aa5.34□□□□□ -1.55
SWC3YAL011W RAD50P12753 1312 aa5.34□□□□□ -1.55
SWC3YAL011W PBP2P38151 413 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
SWC3YAL011W VPS29P38759 282 aa5.34□□□□□ -1.55
SWC3YAL011W DJP1P40564 432 aa5.34□□□□□ -1.55
SWC3YAL011W TEA1P47988 759 aa5.34□□□□□ -1.55
SWC3YAL011W ADE16P54113 591 aaKnown RBP5.34□□□□□ -1.55
SWC3YAL011W ALD6P54115 500 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms