RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Card11Q8CIS0 1159 aa19.54■□□□□ 0.72
Ercc1-203ENSMUST00000160369 Srcin1Q9QWI6 1250 aa19.54■□□□□ 0.72
Ercc1-203ENSMUST00000160369 Rreb1Q3UH06 1700 aaKnown RBP19.54■□□□□ 0.72
Ercc1-203ENSMUST00000160369 Itsn2Q9Z0R6 1659 aa19.52■□□□□ 0.72
Ercc1-203ENSMUST00000160369 Kif20bQ80WE4 1774 aaKnown RBP19.52■□□□□ 0.72
Ercc1-203ENSMUST00000160369 Atp2b2Q9R0K7 1198 aa19.52■□□□□ 0.72
Ercc1-203ENSMUST00000160369 RalgapbQ8BQZ4 1484 aa19.52■□□□□ 0.72
Ercc1-203ENSMUST00000160369 Gm10563F6WIE4 79 aa19.5■□□□□ 0.71
Ercc1-203ENSMUST00000160369 CenpjQ569L8 1344 aa19.49■□□□□ 0.71
Ercc1-203ENSMUST00000160369 Rpgrip1Q9EPQ2 1331 aa19.49■□□□□ 0.71
Ercc1-203ENSMUST00000160369 Gm16486A0A1D5RMD1 1434 aa19.48■□□□□ 0.71
Ercc1-203ENSMUST00000160369 NalcnQ8BXR5 1738 aa19.48■□□□□ 0.71
Ercc1-203ENSMUST00000160369 Gimap5Q8BWF2 308 aa19.47■□□□□ 0.71
Ercc1-203ENSMUST00000160369 Mink1Q9JM52 1308 aa19.47■□□□□ 0.71
Ercc1-203ENSMUST00000160369 Rock2P70336 1388 aa19.46■□□□□ 0.71
Ercc1-203ENSMUST00000160369 Las1lA2BE28 776 aaKnown RBP19.46■□□□□ 0.71
Ercc1-203ENSMUST00000160369 Tom1O88746 492 aa19.46■□□□□ 0.71
Ercc1-203ENSMUST00000160369 D430041D05RikF6ZGR6 1678 aa19.46■□□□□ 0.71
Ercc1-203ENSMUST00000160369 Usp32F8VPZ3 1604 aa19.45■□□□□ 0.7
Ercc1-203ENSMUST00000160369 C3P01027 1663 aa19.45■□□□□ 0.7
Ercc1-203ENSMUST00000160369 Abca14E9Q8F8 1683 aa19.43■□□□□ 0.7
Ercc1-203ENSMUST00000160369 Sirt1Q923E4 737 aa19.42■□□□□ 0.7
Ercc1-203ENSMUST00000160369 Zbtb4Q5F293 982 aa19.4■□□□□ 0.7
Ercc1-203ENSMUST00000160369 Ecm2Q5FW85 670 aa19.4■□□□□ 0.7
Ercc1-203ENSMUST00000160369 Pik3c2bE9QAN8 1632 aa19.39■□□□□ 0.69
Ercc1-203ENSMUST00000160369 C5P06684 1680 aa19.38■□□□□ 0.69
Ercc1-203ENSMUST00000160369 Kcna6Q61923 529 aa19.38■□□□□ 0.69
Ercc1-203ENSMUST00000160369 Cdk19Q8BWD8 501 aa19.38■□□□□ 0.69
Ercc1-203ENSMUST00000160369 Als2Q920R0 1651 aa19.37■□□□□ 0.69
Ercc1-203ENSMUST00000160369 Cwc22Q8C5N3 908 aaKnown RBP19.37■□□□□ 0.69
Ercc1-203ENSMUST00000160369 DccP70211 1447 aa19.36■□□□□ 0.69
Ercc1-203ENSMUST00000160369 KdrP35918 1367 aa19.36■□□□□ 0.69
Ercc1-203ENSMUST00000160369 Ttll13A4Q9F6 804 aa19.36■□□□□ 0.69
Ercc1-203ENSMUST00000160369 Gsto1O09131 240 aa19.36■□□□□ 0.69
Ercc1-203ENSMUST00000160369 Pik3c2aQ61194 1686 aa19.36■□□□□ 0.69
Ercc1-203ENSMUST00000160369 Pola1P33609 1465 aa19.35■□□□□ 0.69
Ercc1-203ENSMUST00000160369 Ppargc1bQ8VHJ7 1014 aa19.35■□□□□ 0.69
Ercc1-203ENSMUST00000160369 Ap3b2Q9JME5 1082 aa19.35■□□□□ 0.69
Ercc1-203ENSMUST00000160369 Farp2Q91VS8 1065 aa19.34■□□□□ 0.69
Ercc1-203ENSMUST00000160369 Sipa1l2Q80TE4 1722 aa19.33■□□□□ 0.68
Ercc1-203ENSMUST00000160369 InsrP15208 1372 aa19.32■□□□□ 0.68
Ercc1-203ENSMUST00000160369 Tmem2Q5FWI3 1383 aa19.32■□□□□ 0.68
Ercc1-203ENSMUST00000160369 Wnk3Q80XP9 1757 aa19.32■□□□□ 0.68
Ercc1-203ENSMUST00000160369 FanciQ8K368 1330 aa19.32■□□□□ 0.68
Ercc1-203ENSMUST00000160369 Idi1P58044 227 aa19.32■□□□□ 0.68
Ercc1-203ENSMUST00000160369 Sox12Q04890 314 aa19.32■□□□□ 0.68
Ercc1-203ENSMUST00000160369 Exosc9Q9JHI7 438 aaKnown RBP19.32■□□□□ 0.68
Ercc1-203ENSMUST00000160369 NktrP30415 1453 aa19.29■□□□□ 0.68
Ercc1-203ENSMUST00000160369 Slc5a4bQ91ZP4 660 aa19.29■□□□□ 0.68
Ercc1-203ENSMUST00000160369 Abcc10Q8R4P9 1501 aa19.29■□□□□ 0.68
Ercc1-203ENSMUST00000160369 Kif24Q6NWW5 1356 aa19.29■□□□□ 0.68
Ercc1-203ENSMUST00000160369 Tnrc6bQ8BKI2 1810 aaKnown RBP19.28■□□□□ 0.68
Ercc1-203ENSMUST00000160369 GnpatP98192 678 aa19.28■□□□□ 0.68
Ercc1-203ENSMUST00000160369 NgefQ8CHT1 710 aa19.28■□□□□ 0.68
Ercc1-203ENSMUST00000160369 Kif1aP33173 1695 aa19.27■□□□□ 0.68
Ercc1-203ENSMUST00000160369 Camta1A2A891 1682 aa19.27■□□□□ 0.67
Ercc1-203ENSMUST00000160369 Idi2Q8BFZ6 227 aa19.26■□□□□ 0.67
Ercc1-203ENSMUST00000160369 Qtrt2B8ZXI1 415 aa19.25■□□□□ 0.67
Ercc1-203ENSMUST00000160369 Znf316Q6PGE4 1016 aa19.25■□□□□ 0.67
Ercc1-203ENSMUST00000160369 PtpruB1AUH1 1446 aa19.23■□□□□ 0.67
Ercc1-203ENSMUST00000160369 N4bp2F8VQG7 1678 aaKnown RBP19.22■□□□□ 0.67
Ercc1-203ENSMUST00000160369 CatipB9EKE5 520 aa19.21■□□□□ 0.67
Ercc1-203ENSMUST00000160369 Mon2Q80TL7 1715 aa19.21■□□□□ 0.67
Ercc1-203ENSMUST00000160369 Wdr17E9Q271 1322 aa19.21■□□□□ 0.67
Ercc1-203ENSMUST00000160369 Ybx3Q9JKB3 361 aaKnown RBP19.2■□□□□ 0.66
Ercc1-203ENSMUST00000160369 Map3k19E9Q3S4 1311 aa19.19■□□□□ 0.66
Ercc1-203ENSMUST00000160369 Zranb1Q7M760 708 aa19.18■□□□□ 0.66
Ercc1-203ENSMUST00000160369 Znf335A2A5K6 1337 aa19.18■□□□□ 0.66
Ercc1-203ENSMUST00000160369 Fyb1O35601 819 aa19.17■□□□□ 0.66
Ercc1-203ENSMUST00000160369 Ddx17Q501J6 650 aaKnown RBP19.17■□□□□ 0.66
Ercc1-203ENSMUST00000160369 Sin3aQ60520 1274 aaKnown RBP19.17■□□□□ 0.66
Ercc1-203ENSMUST00000160369 Zfp142G5E869 1843 aa19.16■□□□□ 0.66
Ercc1-203ENSMUST00000160369 Cnga1P29974 684 aa19.16■□□□□ 0.66
Ercc1-203ENSMUST00000160369 Atp7bQ64446 1462 aa19.16■□□□□ 0.66
Ercc1-203ENSMUST00000160369 Slc24a1Q91WD8 1130 aa19.15■□□□□ 0.66
Ercc1-203ENSMUST00000160369 Cadps2Q8BYR5 1297 aa19.14■□□□□ 0.65
Ercc1-203ENSMUST00000160369 Atp10bB1AWN4 1474 aa19.12■□□□□ 0.65
Ercc1-203ENSMUST00000160369 Sbno1Q689Z5 1390 aa19.12■□□□□ 0.65
Ercc1-203ENSMUST00000160369 Nyap1Q6PFX7 833 aa19.12■□□□□ 0.65
Ercc1-203ENSMUST00000160369 Nrxn1Q9CS84 1514 aa19.11■□□□□ 0.65
Ercc1-203ENSMUST00000160369 Ggt6Q6PDE7 497 aa19.11■□□□□ 0.65
Ercc1-203ENSMUST00000160369 Adgrl1Q80TR1 1466 aa19.1■□□□□ 0.65
Ercc1-203ENSMUST00000160369 ClspnQ80YR7 1315 aa19.1■□□□□ 0.65
Ercc1-203ENSMUST00000160369 Slc4a1apE9PX68 744 aa19.1■□□□□ 0.65
Ercc1-203ENSMUST00000160369 Gimap6Q8K349 305 aa19.1■□□□□ 0.65
Ercc1-203ENSMUST00000160369 TimelessQ9R1X4 1197 aa19.1■□□□□ 0.65
Ercc1-203ENSMUST00000160369 Marf1Q8BJ34 1730 aaKnown RBP19.1■□□□□ 0.65
Ercc1-203ENSMUST00000160369 Znf526Q8BI66 675 aa19.09■□□□□ 0.65
Ercc1-203ENSMUST00000160369 Fam135bQ9DAI6 1403 aa19.08■□□□□ 0.65
Ercc1-203ENSMUST00000160369 Dixdc1Q80Y83 711 aa19.08■□□□□ 0.64
Ercc1-203ENSMUST00000160369 Tmf1B9EKI3 1091 aa19.07■□□□□ 0.64
Ercc1-203ENSMUST00000160369 Slc35g1Q8BY79 368 aa19.07■□□□□ 0.64
Ercc1-203ENSMUST00000160369 Frmpd2A0A140LI67 1392 aa19.06■□□□□ 0.64
Ercc1-203ENSMUST00000160369 Fam184bQ0KK56 942 aa19.06■□□□□ 0.64
Ercc1-203ENSMUST00000160369 Bcl2l12Q9D3J3 255 aa19.06■□□□□ 0.64
Ercc1-203ENSMUST00000160369 HdgfP51859 237 aaKnown RBP19.05■□□□□ 0.64
Ercc1-203ENSMUST00000160369 Plekhg5Q66T02 1073 aa19.05■□□□□ 0.64
Ercc1-203ENSMUST00000160369 ZgpatQ8VDM1 511 aa19.05■□□□□ 0.64
Ercc1-203ENSMUST00000160369 Zmym3Q9JLM4 1370 aa19.05■□□□□ 0.64
Ercc1-203ENSMUST00000160369 Kif16bB1AVY7 1312 aa19.04■□□□□ 0.64
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms