RNA–Protein interactions for RNA: ENSMUST00000126429.7

Ccdc171-204, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc171, Length 1,388 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-204ENSMUST00000126429 Ildr2B5TVM2 661 aa20.1■□□□□ 0.81
Ccdc171-204ENSMUST00000126429 Lrrc7Q80TE7 1490 aa20.1■□□□□ 0.81
Ccdc171-204ENSMUST00000126429 Cntnap1O54991 1385 aa20.09■□□□□ 0.81
Ccdc171-204ENSMUST00000126429 Cps1Q8C196 1500 aa20.09■□□□□ 0.81
Ccdc171-204ENSMUST00000126429 Mug2P28666 1451 aa20.09■□□□□ 0.81
Ccdc171-204ENSMUST00000126429 Dmrt2Q8BG36 561 aa20.08■□□□□ 0.8
Ccdc171-204ENSMUST00000126429 Cep170bQ80U49 1574 aa20.07■□□□□ 0.8
Ccdc171-204ENSMUST00000126429 Nhsl1Q8CAF4 1587 aa20.07■□□□□ 0.8
Ccdc171-204ENSMUST00000126429 NefmP08553 848 aa20.06■□□□□ 0.8
Ccdc171-204ENSMUST00000126429 Usp40Q8BWR4 1235 aa20.06■□□□□ 0.8
Ccdc171-204ENSMUST00000126429 Cdk5rap2Q8K389 1822 aa20.06■□□□□ 0.8
Ccdc171-204ENSMUST00000126429 PtprvP70289 1705 aa20.05■□□□□ 0.8
Ccdc171-204ENSMUST00000126429 Acin1Q9JIX8 1338 aaKnown RBP20.03■□□□□ 0.8
Ccdc171-204ENSMUST00000126429 Plekhg1F6S200 1446 aa20.03■□□□□ 0.8
Ccdc171-204ENSMUST00000126429 Ppargc1bQ8VHJ7 1014 aa20.02■□□□□ 0.8
Ccdc171-204ENSMUST00000126429 Q3UJC8 639 aa20.01■□□□□ 0.79
Ccdc171-204ENSMUST00000126429 IqubQ8CDK3 788 aa20.01■□□□□ 0.79
Ccdc171-204ENSMUST00000126429 MypopQ8R4U1 393 aa20.01■□□□□ 0.79
Ccdc171-204ENSMUST00000126429 TonslQ6NZL6 1363 aa20.01■□□□□ 0.79
Ccdc171-204ENSMUST00000126429 Ift172Q6VH22 1749 aa20.01■□□□□ 0.79
Ccdc171-204ENSMUST00000126429 Stag3O70576 1240 aa20■□□□□ 0.79
Ccdc171-204ENSMUST00000126429 RalgapbQ8BQZ4 1484 aa20■□□□□ 0.79
Ccdc171-204ENSMUST00000126429 Ggt6Q6PDE7 497 aa19.99■□□□□ 0.79
Ccdc171-204ENSMUST00000126429 Unc13bQ9Z1N9 1602 aa19.99■□□□□ 0.79
Ccdc171-204ENSMUST00000126429 Gm10563F6WIE4 79 aa19.98■□□□□ 0.79
Ccdc171-204ENSMUST00000126429 Rundc1Q0VDN7 615 aa19.98■□□□□ 0.79
Ccdc171-204ENSMUST00000126429 Nwd1A6H603 1563 aa19.98■□□□□ 0.79
Ccdc171-204ENSMUST00000126429 Nphp4P59240 1425 aa19.98■□□□□ 0.79
Ccdc171-204ENSMUST00000126429 Dapk1Q80YE7 1442 aa19.98■□□□□ 0.79
Ccdc171-204ENSMUST00000126429 Gtf2e1Q9D0D5 440 aa19.96■□□□□ 0.79
Ccdc171-204ENSMUST00000126429 Usp32F8VPZ3 1604 aa19.96■□□□□ 0.79
Ccdc171-204ENSMUST00000126429 Atp2b2Q9R0K7 1198 aa19.95■□□□□ 0.79
Ccdc171-204ENSMUST00000126429 Col14a1Q80X19 1797 aa19.95■□□□□ 0.78
Ccdc171-204ENSMUST00000126429 Sipa1l1Q8C0T5 1782 aa19.95■□□□□ 0.78
Ccdc171-204ENSMUST00000126429 Atf3Q60765 181 aa19.95■□□□□ 0.78
Ccdc171-204ENSMUST00000126429 Mink1Q9JM52 1308 aa19.94■□□□□ 0.78
Ccdc171-204ENSMUST00000126429 Lrp6O88572 1613 aa19.94■□□□□ 0.78
Ccdc171-204ENSMUST00000126429 MpndQ3TV65 487 aa19.94■□□□□ 0.78
Ccdc171-204ENSMUST00000126429 Itsn2Q9Z0R6 1659 aa19.93■□□□□ 0.78
Ccdc171-204ENSMUST00000126429 C3P01027 1663 aa19.92■□□□□ 0.78
Ccdc171-204ENSMUST00000126429 Siglec1Q62230 1695 aa19.92■□□□□ 0.78
Ccdc171-204ENSMUST00000126429 Zbtb4Q5F293 982 aa19.92■□□□□ 0.78
Ccdc171-204ENSMUST00000126429 Card11Q8CIS0 1159 aa19.92■□□□□ 0.78
Ccdc171-204ENSMUST00000126429 Stard8Q8K031 1019 aa19.92■□□□□ 0.78
Ccdc171-204ENSMUST00000126429 Srcin1Q9QWI6 1250 aa19.92■□□□□ 0.78
Ccdc171-204ENSMUST00000126429 NalcnQ8BXR5 1738 aa19.92■□□□□ 0.78
Ccdc171-204ENSMUST00000126429 Pik3c2bE9QAN8 1632 aa19.89■□□□□ 0.77
Ccdc171-204ENSMUST00000126429 Znf526Q8BI66 675 aa19.89■□□□□ 0.77
Ccdc171-204ENSMUST00000126429 Rreb1Q3UH06 1700 aaKnown RBP19.88■□□□□ 0.77
Ccdc171-204ENSMUST00000126429 Bcl2l12Q9D3J3 255 aa19.87■□□□□ 0.77
Ccdc171-204ENSMUST00000126429 Ybx3Q9JKB3 361 aaKnown RBP19.87■□□□□ 0.77
Ccdc171-204ENSMUST00000126429 Rgs17Q9QZB0 210 aa19.87■□□□□ 0.77
Ccdc171-204ENSMUST00000126429 Abca14E9Q8F8 1683 aa19.86■□□□□ 0.77
Ccdc171-204ENSMUST00000126429 Idi1P58044 227 aa19.86■□□□□ 0.77
Ccdc171-204ENSMUST00000126429 Zfp142G5E869 1843 aa19.86■□□□□ 0.77
Ccdc171-204ENSMUST00000126429 Kif20bQ80WE4 1774 aaKnown RBP19.86■□□□□ 0.77
Ccdc171-204ENSMUST00000126429 Gm16486A0A1D5RMD1 1434 aa19.85■□□□□ 0.77
Ccdc171-204ENSMUST00000126429 Cdk19Q8BWD8 501 aa19.84■□□□□ 0.77
Ccdc171-204ENSMUST00000126429 D430041D05RikF6ZGR6 1678 aa19.84■□□□□ 0.77
Ccdc171-204ENSMUST00000126429 Sipa1l2Q80TE4 1722 aa19.83■□□□□ 0.77
Ccdc171-204ENSMUST00000126429 NktrP30415 1453 aa19.83■□□□□ 0.77
Ccdc171-204ENSMUST00000126429 Rock2P70336 1388 aa19.82■□□□□ 0.76
Ccdc171-204ENSMUST00000126429 CenpjQ569L8 1344 aa19.82■□□□□ 0.76
Ccdc171-204ENSMUST00000126429 Kcna6Q61923 529 aa19.82■□□□□ 0.76
Ccdc171-204ENSMUST00000126429 Sirt1Q923E4 737 aa19.82■□□□□ 0.76
Ccdc171-204ENSMUST00000126429 C5P06684 1680 aa19.81■□□□□ 0.76
Ccdc171-204ENSMUST00000126429 KdrP35918 1367 aa19.81■□□□□ 0.76
Ccdc171-204ENSMUST00000126429 Als2Q920R0 1651 aa19.81■□□□□ 0.76
Ccdc171-204ENSMUST00000126429 GnpatP98192 678 aa19.79■□□□□ 0.76
Ccdc171-204ENSMUST00000126429 Sox12Q04890 314 aa19.79■□□□□ 0.76
Ccdc171-204ENSMUST00000126429 Ddx17Q501J6 650 aaKnown RBP19.79■□□□□ 0.76
Ccdc171-204ENSMUST00000126429 Farp2Q91VS8 1065 aa19.79■□□□□ 0.76
Ccdc171-204ENSMUST00000126429 Kdm2bQ6P1G2 1309 aa19.78■□□□□ 0.76
Ccdc171-204ENSMUST00000126429 Tmem2Q5FWI3 1383 aa19.78■□□□□ 0.76
Ccdc171-204ENSMUST00000126429 Kif24Q6NWW5 1356 aa19.77■□□□□ 0.76
Ccdc171-204ENSMUST00000126429 Znf316Q6PGE4 1016 aa19.76■□□□□ 0.75
Ccdc171-204ENSMUST00000126429 Pola1P33609 1465 aa19.76■□□□□ 0.75
Ccdc171-204ENSMUST00000126429 Abcc10Q8R4P9 1501 aa19.75■□□□□ 0.75
Ccdc171-204ENSMUST00000126429 Gsto1O09131 240 aa19.74■□□□□ 0.75
Ccdc171-204ENSMUST00000126429 NgefQ8CHT1 710 aa19.74■□□□□ 0.75
Ccdc171-204ENSMUST00000126429 DccP70211 1447 aa19.73■□□□□ 0.75
Ccdc171-204ENSMUST00000126429 Camta1A2A891 1682 aa19.73■□□□□ 0.75
Ccdc171-204ENSMUST00000126429 Trap1aP19473 224 aa19.71■□□□□ 0.75
Ccdc171-204ENSMUST00000126429 Sin3aQ60520 1274 aaKnown RBP19.7■□□□□ 0.74
Ccdc171-204ENSMUST00000126429 Emilin2Q8K482 1074 aa19.7■□□□□ 0.74
Ccdc171-204ENSMUST00000126429 Ap3b2Q9JME5 1082 aa19.7■□□□□ 0.74
Ccdc171-204ENSMUST00000126429 Marf1Q8BJ34 1730 aaKnown RBP19.69■□□□□ 0.74
Ccdc171-204ENSMUST00000126429 InsrP15208 1372 aa19.69■□□□□ 0.74
Ccdc171-204ENSMUST00000126429 Idi2Q8BFZ6 227 aa19.69■□□□□ 0.74
Ccdc171-204ENSMUST00000126429 Wnk3Q80XP9 1757 aa19.68■□□□□ 0.74
Ccdc171-204ENSMUST00000126429 Map3k19E9Q3S4 1311 aa19.67■□□□□ 0.74
Ccdc171-204ENSMUST00000126429 Hoxd11P23813 323 aa19.66■□□□□ 0.74
Ccdc171-204ENSMUST00000126429 Slc35g1Q8BY79 368 aa19.66■□□□□ 0.74
Ccdc171-204ENSMUST00000126429 Exosc9Q9JHI7 438 aaKnown RBP19.66■□□□□ 0.74
Ccdc171-204ENSMUST00000126429 Wdr17E9Q271 1322 aa19.66■□□□□ 0.74
Ccdc171-204ENSMUST00000126429 Cwc22Q8C5N3 908 aaKnown RBP19.65■□□□□ 0.74
Ccdc171-204ENSMUST00000126429 Cnga1P29974 684 aa19.64■□□□□ 0.73
Ccdc171-204ENSMUST00000126429 Smim5Q8BT42 78 aa19.64■□□□□ 0.73
Ccdc171-204ENSMUST00000126429 FanciQ8K368 1330 aa19.64■□□□□ 0.73
Ccdc171-204ENSMUST00000126429 PtpruB1AUH1 1446 aa19.64■□□□□ 0.73
Retrieved 100 of 22,080 RNA–protein pairs in 50.9 ms