RNA–Protein interactions for RNA: ENSMUST00000126429.7

Ccdc171-204, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc171, Length 1,388 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-204ENSMUST00000126429 Gm35339A0A140LHH9 1649 aa31.51■■■□□ 2.63
Ccdc171-204ENSMUST00000126429 NischQ80TM9 1593 aa31.25■■■□□ 2.59
Ccdc171-204ENSMUST00000126429 Abcc9P70170 1546 aa30.25■■■□□ 2.43
Ccdc171-204ENSMUST00000126429 Abcc8B2RUS7 1588 aa30.21■■■□□ 2.43
Ccdc171-204ENSMUST00000126429 ScribQ80U72 1612 aa29.1■■■□□ 2.25
Ccdc171-204ENSMUST00000126429 NacadQ5SWP3 1504 aa28.11■■■□□ 2.09
Ccdc171-204ENSMUST00000126429 Kdm5dQ62240 1548 aa28.08■■■□□ 2.09
Ccdc171-204ENSMUST00000126429 Dnajc5bQ9CQ94 199 aa27.85■■■□□ 2.05
Ccdc171-204ENSMUST00000126429 Dcaf1Q80TR8 1506 aa27.8■■■□□ 2.04
Ccdc171-204ENSMUST00000126429 Sycp2Q9CUU3 1500 aa27.58■■■□□ 2.01
Ccdc171-204ENSMUST00000126429 BicraF8VPZ9 1578 aa27.31■■□□□ 1.96
Ccdc171-204ENSMUST00000126429 Rhox8Q6VSS7 320 aa27.22■■□□□ 1.95
Ccdc171-204ENSMUST00000126429 Rb1cc1Q9ESK9 1588 aa27.21■■□□□ 1.95
Ccdc171-204ENSMUST00000126429 Chic1Q8CBW7 227 aa27.1■■□□□ 1.93
Ccdc171-204ENSMUST00000126429 Baz1aO88379 1555 aa26.86■■□□□ 1.89
Ccdc171-204ENSMUST00000126429 Thoc2B1AZI6 1594 aaKnown RBP26.78■■□□□ 1.88
Ccdc171-204ENSMUST00000126429 Crybg2B7ZCC2 1516 aa26.76■■□□□ 1.87
Ccdc171-204ENSMUST00000126429 Ccdc180J3QNE4 1664 aa26.74■■□□□ 1.87
Ccdc171-204ENSMUST00000126429 Pds5bQ4VA53 1446 aaKnown RBP26.7■■□□□ 1.86
Ccdc171-204ENSMUST00000126429 Mapk8ip2Q9ERE9 830 aa26.6■■□□□ 1.85
Ccdc171-204ENSMUST00000126429 Zcchc6Q5BLK4 1491 aaKnown RBP26.47■■□□□ 1.83
Ccdc171-204ENSMUST00000126429 Cc2d2aQ8CFW7 1633 aa26.34■■□□□ 1.81
Ccdc171-204ENSMUST00000126429 Atad2bE9Q166 1460 aaKnown RBP26.27■■□□□ 1.8
Ccdc171-204ENSMUST00000126429 Ercc6F8VPZ5 1481 aa26.15■■□□□ 1.78
Ccdc171-204ENSMUST00000126429 Smarca2Q6DIC0 1577 aa26.09■■□□□ 1.77
Ccdc171-204ENSMUST00000126429 Cecr2E9Q2Z1 1453 aa26.06■■□□□ 1.76
Ccdc171-204ENSMUST00000126429 Fam135aQ6NS59 1506 aa26■■□□□ 1.75
Ccdc171-204ENSMUST00000126429 Smarca4Q3TKT4 1613 aaKnown RBP25.95■■□□□ 1.75
Ccdc171-204ENSMUST00000126429 Dnajc5P60904 198 aa25.95■■□□□ 1.74
Ccdc171-204ENSMUST00000126429 Iqgap2Q3UQ44 1575 aa25.79■■□□□ 1.72
Ccdc171-204ENSMUST00000126429 Phldb1Q6PDH0 1371 aaKnown RBP25.66■■□□□ 1.7
Ccdc171-204ENSMUST00000126429 Wdr62Q3U3T8 1523 aa25.65■■□□□ 1.7
Ccdc171-204ENSMUST00000126429 Frmpd1A2AKB4 1549 aa25.63■■□□□ 1.69
Ccdc171-204ENSMUST00000126429 Trim41Q5NCC3 630 aa25.62■■□□□ 1.69
Ccdc171-204ENSMUST00000126429 Rtl1Q7M732 1744 aa25.59■■□□□ 1.69
Ccdc171-204ENSMUST00000126429 Baz1bQ9Z277 1479 aa25.58■■□□□ 1.69
Ccdc171-204ENSMUST00000126429 Ubl4bQ9CQ84 188 aa25.53■■□□□ 1.68
Ccdc171-204ENSMUST00000126429 Ccdc136Q3TVA9 1136 aa25.49■■□□□ 1.67
Ccdc171-204ENSMUST00000126429 CftrP26361 1476 aa25.45■■□□□ 1.66
Ccdc171-204ENSMUST00000126429 Mrc2Q64449 1479 aa25.42■■□□□ 1.66
Ccdc171-204ENSMUST00000126429 Synj1Q8CHC4 1574 aa25.38■■□□□ 1.65
Ccdc171-204ENSMUST00000126429 Brd4Q9ESU6 1400 aaKnown RBP25.38■■□□□ 1.65
Ccdc171-204ENSMUST00000126429 Cttnbp2B9EJA2 1648 aa25.3■■□□□ 1.64
Ccdc171-204ENSMUST00000126429 Unc13aQ4KUS2 1712 aa25.23■■□□□ 1.63
Ccdc171-204ENSMUST00000126429 Esf1Q3V1V3 845 aaKnown RBP25■■□□□ 1.59
Ccdc171-204ENSMUST00000126429 Lrriq1Q0P5X1 1673 aa24.93■■□□□ 1.58
Ccdc171-204ENSMUST00000126429 Rsf1E9PWW9 1441 aaKnown RBP24.83■■□□□ 1.57
Ccdc171-204ENSMUST00000126429 Kif15Q6P9L6 1387 aa24.72■■□□□ 1.55
Ccdc171-204ENSMUST00000126429 Shroom2A2ALU4 1481 aa24.69■■□□□ 1.54
Ccdc171-204ENSMUST00000126429 Cux2P70298 1426 aa24.67■■□□□ 1.54
Ccdc171-204ENSMUST00000126429 Lamc3Q9R0B6 1581 aa24.62■■□□□ 1.53
Ccdc171-204ENSMUST00000126429 Kif21aQ9QXL2 1672 aa24.62■■□□□ 1.53
Ccdc171-204ENSMUST00000126429 Golga3P55937 1487 aa24.58■■□□□ 1.52
Ccdc171-204ENSMUST00000126429 Eif4g3Q80XI3 1579 aaKnown RBP24.55■■□□□ 1.52
Ccdc171-204ENSMUST00000126429 Col17a1Q07563 1470 aa24.54■■□□□ 1.52
Ccdc171-204ENSMUST00000126429 Cngb1E1AZ71 1325 aa24.48■■□□□ 1.51
Ccdc171-204ENSMUST00000126429 Top2bQ64511 1612 aa24.47■■□□□ 1.51
Ccdc171-204ENSMUST00000126429 Npm1Q61937 292 aaKnown RBP24.42■■□□□ 1.5
Ccdc171-204ENSMUST00000126429 TnnQ80Z71 1560 aa24.37■■□□□ 1.49
Ccdc171-204ENSMUST00000126429 Pabpn1Q8CCS6 302 aaKnown RBP24.36■■□□□ 1.49
Ccdc171-204ENSMUST00000126429 Cep164Q5DU05 1446 aa24.32■■□□□ 1.48
Ccdc171-204ENSMUST00000126429 Phf23Q8BSN5 401 aa24.27■■□□□ 1.48
Ccdc171-204ENSMUST00000126429 Il27Q8K3I6 234 aa24.26■■□□□ 1.47
Ccdc171-204ENSMUST00000126429 Fmn1Q05860 1466 aa24.24■■□□□ 1.47
Ccdc171-204ENSMUST00000126429 Ccdc18Q640L5 1455 aa24.23■■□□□ 1.47
Ccdc171-204ENSMUST00000126429 Urb2E9Q7L1 1524 aaKnown RBP24.22■■□□□ 1.47
Ccdc171-204ENSMUST00000126429 Pelp1Q9DBD5 1123 aaKnown RBP24.19■■□□□ 1.46
Ccdc171-204ENSMUST00000126429 Camsap1A2AHC3 1581 aa24.18■■□□□ 1.46
Ccdc171-204ENSMUST00000126429 Dhx29Q6PGC1 1365 aaKnown RBP24.17■■□□□ 1.46
Ccdc171-204ENSMUST00000126429 LrpprcQ6PB66 1392 aaKnown RBP24.16■■□□□ 1.46
Ccdc171-204ENSMUST00000126429 Plb1Q3TTY0 1478 aa24.14■■□□□ 1.46
Ccdc171-204ENSMUST00000126429 Zcchc11B2RX14 1644 aaKnown RBP24.03■■□□□ 1.44
Ccdc171-204ENSMUST00000126429 PogzQ8BZH4 1409 aaKnown RBP24.02■■□□□ 1.44
Ccdc171-204ENSMUST00000126429 Ccdc88bQ4QRL3 1481 aa24.01■■□□□ 1.43
Ccdc171-204ENSMUST00000126429 Pcdh10E9PXQ7 1057 aa23.98■■□□□ 1.43
Ccdc171-204ENSMUST00000126429 Crocc2F6XLV1 1638 aa23.95■■□□□ 1.42
Ccdc171-204ENSMUST00000126429 Rusc2Q80U22 1514 aa23.93■■□□□ 1.42
Ccdc171-204ENSMUST00000126429 Grin2bQ01097 1482 aa23.92■■□□□ 1.42
Ccdc171-204ENSMUST00000126429 Duox2A2AQ99 1517 aa23.91■■□□□ 1.42
Ccdc171-204ENSMUST00000126429 Ift140E9PY46 1464 aa23.84■■□□□ 1.41
Ccdc171-204ENSMUST00000126429 Top2aQ01320 1528 aaKnown RBP23.8■■□□□ 1.4
Ccdc171-204ENSMUST00000126429 Arhgef5E9Q7D5 1581 aa23.8■■□□□ 1.4
Ccdc171-204ENSMUST00000126429 Efcab5A0JP43 1406 aa23.77■■□□□ 1.4
Ccdc171-204ENSMUST00000126429 Ttbk1Q6PCN3 1308 aa23.75■■□□□ 1.39
Ccdc171-204ENSMUST00000126429 Disp1Q3TDN0 1521 aa23.74■■□□□ 1.39
Ccdc171-204ENSMUST00000126429 Adgrl3Q80TS3 1537 aa23.72■■□□□ 1.39
Ccdc171-204ENSMUST00000126429 NrkQ9R0G8 1455 aa23.69■■□□□ 1.38
Ccdc171-204ENSMUST00000126429 Samd9lQ69Z37 1561 aa23.68■■□□□ 1.38
Ccdc171-204ENSMUST00000126429 PtprkP35822 1457 aa23.65■■□□□ 1.38
Ccdc171-204ENSMUST00000126429 Nup160Q9Z0W3 1402 aaKnown RBP23.6■■□□□ 1.37
Ccdc171-204ENSMUST00000126429 Rad54l2Q99NG0 1466 aa23.59■■□□□ 1.37
Ccdc171-204ENSMUST00000126429 Shroom4Q1W617 1475 aa23.58■■□□□ 1.37
Ccdc171-204ENSMUST00000126429 Gm156Q58A37 223 aa23.54■■□□□ 1.36
Ccdc171-204ENSMUST00000126429 HrcG5E8J6 738 aa23.53■■□□□ 1.36
Ccdc171-204ENSMUST00000126429 Cep170Q6A065 1588 aa23.53■■□□□ 1.36
Ccdc171-204ENSMUST00000126429 PtprtQ99M80 1454 aa23.53■■□□□ 1.36
Ccdc171-204ENSMUST00000126429 Cc2d2bA0A286YDU8 1405 aa23.52■■□□□ 1.36
Ccdc171-204ENSMUST00000126429 Magi3Q9EQJ9 1476 aa23.49■■□□□ 1.35
Ccdc171-204ENSMUST00000126429 Gapvd1Q6PAR5 1458 aa23.49■■□□□ 1.35
Ccdc171-204ENSMUST00000126429 Pbrm1Q8BSQ9 1634 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms