RNA–Protein interactions for RNA: ENSMUST00000105994.3

Snrnp40-201, Transcript of U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrnp40, Length 1,584 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40-201ENSMUST00000105994 Srcin1Q9QWI6 1250 aa29.56■■■□□ 2.32
Snrnp40-201ENSMUST00000105994 Supt5hO55201 1082 aaKnown RBP29.55■■■□□ 2.32
Snrnp40-201ENSMUST00000105994 Usp40Q8BWR4 1235 aa29.54■■■□□ 2.32
Snrnp40-201ENSMUST00000105994 Cps1Q8C196 1500 aa29.54■■■□□ 2.32
Snrnp40-201ENSMUST00000105994 Itsn2Q9Z0R6 1659 aa29.52■■■□□ 2.32
Snrnp40-201ENSMUST00000105994 Tmem94Q7TSH8 1360 aa29.51■■■□□ 2.31
Snrnp40-201ENSMUST00000105994 Gtf2e1Q9D0D5 440 aa29.51■■■□□ 2.31
Snrnp40-201ENSMUST00000105994 Col14a1Q80X19 1797 aa29.5■■■□□ 2.31
Snrnp40-201ENSMUST00000105994 Nwd1A6H603 1563 aa29.46■■■□□ 2.31
Snrnp40-201ENSMUST00000105994 IqubQ8CDK3 788 aa29.45■■■□□ 2.31
Snrnp40-201ENSMUST00000105994 Plekhg1F6S200 1446 aa29.44■■■□□ 2.3
Snrnp40-201ENSMUST00000105994 Plekhg5Q66T02 1073 aa29.44■■■□□ 2.3
Snrnp40-201ENSMUST00000105994 Stk26Q99JT2 416 aa29.44■■■□□ 2.3
Snrnp40-201ENSMUST00000105994 Utp14aQ640M1 767 aaKnown RBP29.43■■■□□ 2.3
Snrnp40-201ENSMUST00000105994 NalcnQ8BXR5 1738 aa29.43■■■□□ 2.3
Snrnp40-201ENSMUST00000105994 Tom1O88746 492 aa29.43■■■□□ 2.3
Snrnp40-201ENSMUST00000105994 Kif20bQ80WE4 1774 aaKnown RBP29.41■■■□□ 2.3
Snrnp40-201ENSMUST00000105994 Gimap5Q8BWF2 308 aa29.4■■■□□ 2.3
Snrnp40-201ENSMUST00000105994 Pik3c2aQ61194 1686 aa29.4■■■□□ 2.3
Snrnp40-201ENSMUST00000105994 Stag3O70576 1240 aa29.38■■■□□ 2.29
Snrnp40-201ENSMUST00000105994 Atf3Q60765 181 aa29.37■■■□□ 2.29
Snrnp40-201ENSMUST00000105994 Cep170bQ80U49 1574 aa29.37■■■□□ 2.29
Snrnp40-201ENSMUST00000105994 C3P01027 1663 aa29.35■■■□□ 2.29
Snrnp40-201ENSMUST00000105994 Gm16486A0A1D5RMD1 1434 aa29.35■■■□□ 2.29
Snrnp40-201ENSMUST00000105994 Zbtb4Q5F293 982 aa29.35■■■□□ 2.29
Snrnp40-201ENSMUST00000105994 Rreb1Q3UH06 1700 aaKnown RBP29.34■■■□□ 2.29
Snrnp40-201ENSMUST00000105994 Usp32F8VPZ3 1604 aa29.32■■■□□ 2.28
Snrnp40-201ENSMUST00000105994 Sbno1Q689Z5 1390 aa29.31■■■□□ 2.28
Snrnp40-201ENSMUST00000105994 D430041D05RikF6ZGR6 1678 aa29.3■■■□□ 2.28
Snrnp40-201ENSMUST00000105994 Ttll13A4Q9F6 804 aa29.29■■■□□ 2.28
Snrnp40-201ENSMUST00000105994 Pik3c2bE9QAN8 1632 aa29.29■■■□□ 2.28
Snrnp40-201ENSMUST00000105994 CenpjQ569L8 1344 aa29.28■■■□□ 2.28
Snrnp40-201ENSMUST00000105994 Q3UJC8 639 aa29.28■■■□□ 2.28
Snrnp40-201ENSMUST00000105994 Pcgf6Q99NA9 353 aa29.28■■■□□ 2.28
Snrnp40-201ENSMUST00000105994 Abca14E9Q8F8 1683 aa29.28■■■□□ 2.28
Snrnp40-201ENSMUST00000105994 Gm10563F6WIE4 79 aa29.26■■■□□ 2.28
Snrnp40-201ENSMUST00000105994 InsrP15208 1372 aa29.24■■■□□ 2.27
Snrnp40-201ENSMUST00000105994 Sipa1l2Q80TE4 1722 aa29.22■■■□□ 2.27
Snrnp40-201ENSMUST00000105994 Mapk8ip2Q9ERE9 830 aa29.2■■■□□ 2.26
Snrnp40-201ENSMUST00000105994 C5P06684 1680 aa29.18■■■□□ 2.26
Snrnp40-201ENSMUST00000105994 KdrP35918 1367 aa29.17■■■□□ 2.26
Snrnp40-201ENSMUST00000105994 Atp2b2Q9R0K7 1198 aa29.17■■■□□ 2.26
Snrnp40-201ENSMUST00000105994 Als2Q920R0 1651 aa29.17■■■□□ 2.26
Snrnp40-201ENSMUST00000105994 Wnk3Q80XP9 1757 aa29.15■■■□□ 2.26
Snrnp40-201ENSMUST00000105994 Slc24a1Q91WD8 1130 aa29.14■■■□□ 2.26
Snrnp40-201ENSMUST00000105994 Slc5a4bQ91ZP4 660 aa29.13■■■□□ 2.25
Snrnp40-201ENSMUST00000105994 Mink1Q9JM52 1308 aa29.13■■■□□ 2.25
Snrnp40-201ENSMUST00000105994 PrxO55103 1391 aa29.13■■■□□ 2.25
Snrnp40-201ENSMUST00000105994 Qtrt2B8ZXI1 415 aa29.13■■■□□ 2.25
Snrnp40-201ENSMUST00000105994 NktrP30415 1453 aa29.12■■■□□ 2.25
Snrnp40-201ENSMUST00000105994 Nyap1Q6PFX7 833 aa29.1■■■□□ 2.25
Snrnp40-201ENSMUST00000105994 Tmf1B9EKI3 1091 aa29.09■■■□□ 2.25
Snrnp40-201ENSMUST00000105994 GapdhsQ64467 440 aa29.09■■■□□ 2.25
Snrnp40-201ENSMUST00000105994 Zfp142G5E869 1843 aa29.09■■■□□ 2.25
Snrnp40-201ENSMUST00000105994 DccP70211 1447 aa29.09■■■□□ 2.25
Snrnp40-201ENSMUST00000105994 Kif24Q6NWW5 1356 aa29.07■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Slc4a1apE9PX68 744 aa29.07■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Kcna6Q61923 529 aa29.06■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Fam184bQ0KK56 942 aa29.05■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Pank3Q8R2W9 370 aa29.05■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 GnpatP98192 678 aa29.05■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Smg6P61406 1418 aaKnown RBP29.04■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Farp2Q91VS8 1065 aa29.04■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Gsto1O09131 240 aa29.03■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Cdk19Q8BWD8 501 aa29.03■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Idi1P58044 227 aa29.01■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Ddx17Q501J6 650 aaKnown RBP29.01■■■□□ 2.24
Snrnp40-201ENSMUST00000105994 Camta1A2A891 1682 aa29■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Tmem2Q5FWI3 1383 aa29■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Exosc9Q9JHI7 438 aaKnown RBP28.99■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Ybx3Q9JKB3 361 aaKnown RBP28.99■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 FanciQ8K368 1330 aa28.99■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Sox12Q04890 314 aa28.97■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Inpp5dQ9ES52 1191 aa28.97■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Tnrc6bQ8BKI2 1810 aaKnown RBP28.97■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Zscan10Q3URR7 782 aa28.96■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Znf526Q8BI66 675 aa28.96■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Sirt1Q923E4 737 aa28.96■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 N4bp2F8VQG7 1678 aaKnown RBP28.96■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Kif1aP33173 1695 aa28.96■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Abcc10Q8R4P9 1501 aa28.95■■■□□ 2.23
Snrnp40-201ENSMUST00000105994 Cypt2Q6P924 180 aa28.94■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Nhsl1Q8CAF4 1587 aa28.93■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Fbln2P37889 1221 aa28.92■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Adgrl1Q80TR1 1466 aa28.91■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Sema6bO54951 886 aa28.91■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Cnga1P29974 684 aa28.91■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Bcl2l12Q9D3J3 255 aa28.91■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Nrxn1Q9CS84 1514 aa28.91■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Slit2Q9R1B9 1521 aa28.91■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Marf1Q8BJ34 1730 aaKnown RBP28.91■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Cntnap1O54991 1385 aa28.89■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 PtprvP70289 1705 aa28.89■■■□□ 2.22
Snrnp40-201ENSMUST00000105994 Fnbp4Q6ZQ03 1031 aa28.88■■■□□ 2.21
Snrnp40-201ENSMUST00000105994 NgefQ8CHT1 710 aa28.88■■■□□ 2.21
Snrnp40-201ENSMUST00000105994 Ap3b2Q9JME5 1082 aa28.88■■■□□ 2.21
Snrnp40-201ENSMUST00000105994 PtpruB1AUH1 1446 aa28.87■■■□□ 2.21
Snrnp40-201ENSMUST00000105994 Gprasp1Q5U4C1 1347 aa28.85■■■□□ 2.21
Snrnp40-201ENSMUST00000105994 Znf316Q6PGE4 1016 aa28.84■■■□□ 2.21
Snrnp40-201ENSMUST00000105994 Zranb1Q7M760 708 aa28.84■■■□□ 2.21
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms