RNA–Protein interactions for RNA: ENSMUST00000105994.3

Snrnp40-201, Transcript of U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrnp40, Length 1,584 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40-201ENSMUST00000105994 Gm35339A0A140LHH9 1649 aa46.56■■■■■ 5.04
Snrnp40-201ENSMUST00000105994 NischQ80TM9 1593 aa45.91■■■■■ 4.94
Snrnp40-201ENSMUST00000105994 Abcc9P70170 1546 aa44.43■■■■■ 4.7
Snrnp40-201ENSMUST00000105994 Abcc8B2RUS7 1588 aa44.39■■■■■ 4.7
Snrnp40-201ENSMUST00000105994 ScribQ80U72 1612 aa42.84■■■■■ 4.45
Snrnp40-201ENSMUST00000105994 NacadQ5SWP3 1504 aa41.44■■■■■ 4.22
Snrnp40-201ENSMUST00000105994 Kdm5dQ62240 1548 aa41.4■■■■■ 4.22
Snrnp40-201ENSMUST00000105994 Dcaf1Q80TR8 1506 aa40.83■■■■■ 4.13
Snrnp40-201ENSMUST00000105994 Sycp2Q9CUU3 1500 aa40.64■■■■■ 4.1
Snrnp40-201ENSMUST00000105994 BicraF8VPZ9 1578 aa40.11■■■■■ 4.01
Snrnp40-201ENSMUST00000105994 Rhox8Q6VSS7 320 aa40.04■■■■■ 4
Snrnp40-201ENSMUST00000105994 Rb1cc1Q9ESK9 1588 aa40.03■■■■■ 4
Snrnp40-201ENSMUST00000105994 Ccdc180J3QNE4 1664 aa39.47■■■■□ 3.91
Snrnp40-201ENSMUST00000105994 Baz1aO88379 1555 aa39.45■■■■□ 3.91
Snrnp40-201ENSMUST00000105994 Crybg2B7ZCC2 1516 aa39.28■■■■□ 3.88
Snrnp40-201ENSMUST00000105994 Dnajc5bQ9CQ94 199 aa38.96■■■■□ 3.83
Snrnp40-201ENSMUST00000105994 Pds5bQ4VA53 1446 aaKnown RBP38.92■■■■□ 3.82
Snrnp40-201ENSMUST00000105994 Zcchc6Q5BLK4 1491 aaKnown RBP38.85■■■■□ 3.81
Snrnp40-201ENSMUST00000105994 Thoc2B1AZI6 1594 aaKnown RBP38.65■■■■□ 3.78
Snrnp40-201ENSMUST00000105994 Atad2bE9Q166 1460 aaKnown RBP38.57■■■■□ 3.77
Snrnp40-201ENSMUST00000105994 Rtl1Q7M732 1744 aa38.5■■■■□ 3.75
Snrnp40-201ENSMUST00000105994 Smarca2Q6DIC0 1577 aa38.3■■■■□ 3.72
Snrnp40-201ENSMUST00000105994 Smarca4Q3TKT4 1613 aaKnown RBP38.28■■■■□ 3.72
Snrnp40-201ENSMUST00000105994 Cecr2E9Q2Z1 1453 aa38.18■■■■□ 3.7
Snrnp40-201ENSMUST00000105994 Ercc6F8VPZ5 1481 aa38.12■■■■□ 3.69
Snrnp40-201ENSMUST00000105994 Iqgap2Q3UQ44 1575 aa38.08■■■■□ 3.69
Snrnp40-201ENSMUST00000105994 Cc2d2aQ8CFW7 1633 aa38.03■■■■□ 3.68
Snrnp40-201ENSMUST00000105994 Fam135aQ6NS59 1506 aa37.76■■■■□ 3.64
Snrnp40-201ENSMUST00000105994 Wdr62Q3U3T8 1523 aa37.75■■■■□ 3.63
Snrnp40-201ENSMUST00000105994 Frmpd1A2AKB4 1549 aa37.7■■■■□ 3.63
Snrnp40-201ENSMUST00000105994 Phldb1Q6PDH0 1371 aaKnown RBP37.46■■■■□ 3.59
Snrnp40-201ENSMUST00000105994 CftrP26361 1476 aa37.3■■■■□ 3.56
Snrnp40-201ENSMUST00000105994 Baz1bQ9Z277 1479 aa37.29■■■■□ 3.56
Snrnp40-201ENSMUST00000105994 Cttnbp2B9EJA2 1648 aa37.28■■■■□ 3.56
Snrnp40-201ENSMUST00000105994 Ccdc136Q3TVA9 1136 aa37.28■■■■□ 3.56
Snrnp40-201ENSMUST00000105994 Unc13aQ4KUS2 1712 aa37.25■■■■□ 3.55
Snrnp40-201ENSMUST00000105994 Synj1Q8CHC4 1574 aa37.25■■■■□ 3.55
Snrnp40-201ENSMUST00000105994 Brd4Q9ESU6 1400 aaKnown RBP37.19■■■■□ 3.54
Snrnp40-201ENSMUST00000105994 Ubl4bQ9CQ84 188 aa37.1■■■■□ 3.53
Snrnp40-201ENSMUST00000105994 Trim41Q5NCC3 630 aa36.89■■■■□ 3.5
Snrnp40-201ENSMUST00000105994 Mrc2Q64449 1479 aa36.86■■■■□ 3.49
Snrnp40-201ENSMUST00000105994 Esf1Q3V1V3 845 aaKnown RBP36.6■■■■□ 3.45
Snrnp40-201ENSMUST00000105994 Rsf1E9PWW9 1441 aaKnown RBP36.39■■■■□ 3.42
Snrnp40-201ENSMUST00000105994 Kif15Q6P9L6 1387 aa36.32■■■■□ 3.41
Snrnp40-201ENSMUST00000105994 Cux2P70298 1426 aa36.31■■■■□ 3.4
Snrnp40-201ENSMUST00000105994 Lamc3Q9R0B6 1581 aa36.23■■■■□ 3.39
Snrnp40-201ENSMUST00000105994 Golga3P55937 1487 aa36.17■■■■□ 3.38
Snrnp40-201ENSMUST00000105994 Lrriq1Q0P5X1 1673 aa36.1■■■■□ 3.37
Snrnp40-201ENSMUST00000105994 Kif21aQ9QXL2 1672 aa36.08■■■■□ 3.37
Snrnp40-201ENSMUST00000105994 Top2bQ64511 1612 aa36.06■■■■□ 3.36
Snrnp40-201ENSMUST00000105994 Npm1Q61937 292 aaKnown RBP35.89■■■■□ 3.34
Snrnp40-201ENSMUST00000105994 Cngb1E1AZ71 1325 aa35.85■■■■□ 3.33
Snrnp40-201ENSMUST00000105994 TnnQ80Z71 1560 aa35.84■■■■□ 3.33
Snrnp40-201ENSMUST00000105994 Cep164Q5DU05 1446 aa35.8■■■■□ 3.32
Snrnp40-201ENSMUST00000105994 HrcG5E8J6 738 aa35.68■■■■□ 3.3
Snrnp40-201ENSMUST00000105994 Ccdc18Q640L5 1455 aa35.67■■■■□ 3.3
Snrnp40-201ENSMUST00000105994 Camsap1A2AHC3 1581 aa35.58■■■■□ 3.29
Snrnp40-201ENSMUST00000105994 Fmn1Q05860 1466 aa35.58■■■■□ 3.29
Snrnp40-201ENSMUST00000105994 Eif4g3Q80XI3 1579 aaKnown RBP35.57■■■■□ 3.28
Snrnp40-201ENSMUST00000105994 Il27Q8K3I6 234 aa35.57■■■■□ 3.28
Snrnp40-201ENSMUST00000105994 Dhx29Q6PGC1 1365 aaKnown RBP35.54■■■■□ 3.28
Snrnp40-201ENSMUST00000105994 Urb2E9Q7L1 1524 aaKnown RBP35.49■■■■□ 3.27
Snrnp40-201ENSMUST00000105994 LrpprcQ6PB66 1392 aaKnown RBP35.48■■■■□ 3.27
Snrnp40-201ENSMUST00000105994 Plb1Q3TTY0 1478 aa35.44■■■■□ 3.26
Snrnp40-201ENSMUST00000105994 Crocc2F6XLV1 1638 aa35.41■■■■□ 3.26
Snrnp40-201ENSMUST00000105994 Ccdc88bQ4QRL3 1481 aa35.39■■■■□ 3.26
Snrnp40-201ENSMUST00000105994 PogzQ8BZH4 1409 aaKnown RBP35.28■■■■□ 3.24
Snrnp40-201ENSMUST00000105994 Dnajc5P60904 198 aa35.21■■■■□ 3.23
Snrnp40-201ENSMUST00000105994 Chic1Q8CBW7 227 aa35.19■■■■□ 3.22
Snrnp40-201ENSMUST00000105994 Duox2A2AQ99 1517 aa35.12■■■■□ 3.21
Snrnp40-201ENSMUST00000105994 Ift140E9PY46 1464 aa35.11■■■■□ 3.21
Snrnp40-201ENSMUST00000105994 Top2aQ01320 1528 aaKnown RBP35.11■■■■□ 3.21
Snrnp40-201ENSMUST00000105994 Shroom2A2ALU4 1481 aa35.11■■■■□ 3.21
Snrnp40-201ENSMUST00000105994 Grin2bQ01097 1482 aa35.09■■■■□ 3.21
Snrnp40-201ENSMUST00000105994 Rusc2Q80U22 1514 aa35.01■■■■□ 3.2
Snrnp40-201ENSMUST00000105994 Disp1Q3TDN0 1521 aa34.88■■■■□ 3.17
Snrnp40-201ENSMUST00000105994 Samd9lQ69Z37 1561 aa34.88■■■■□ 3.17
Snrnp40-201ENSMUST00000105994 Efcab5A0JP43 1406 aa34.85■■■■□ 3.17
Snrnp40-201ENSMUST00000105994 Setd1bQ8CFT2 1985 aa34.8■■■■□ 3.16
Snrnp40-201ENSMUST00000105994 Pbrm1Q8BSQ9 1634 aaKnown RBP34.76■■■■□ 3.16
Snrnp40-201ENSMUST00000105994 Nup160Q9Z0W3 1402 aaKnown RBP34.73■■■■□ 3.15
Snrnp40-201ENSMUST00000105994 Pabpn1Q8CCS6 302 aaKnown RBP34.72■■■■□ 3.15
Snrnp40-201ENSMUST00000105994 NrkQ9R0G8 1455 aa34.69■■■■□ 3.14
Snrnp40-201ENSMUST00000105994 Cc2d2bA0A286YDU8 1405 aa34.65■■■■□ 3.14
Snrnp40-201ENSMUST00000105994 Rad54l2Q99NG0 1466 aa34.62■■■■□ 3.13
Snrnp40-201ENSMUST00000105994 Col17a1Q07563 1470 aa34.61■■■■□ 3.13
Snrnp40-201ENSMUST00000105994 Grin2aP35436 1464 aa34.54■■■■□ 3.12
Snrnp40-201ENSMUST00000105994 Magi3Q9EQJ9 1476 aa34.54■■■■□ 3.12
Snrnp40-201ENSMUST00000105994 Shroom4Q1W617 1475 aa34.53■■■■□ 3.12
Snrnp40-201ENSMUST00000105994 PtprkP35822 1457 aa34.52■■■■□ 3.12
Snrnp40-201ENSMUST00000105994 Pelp1Q9DBD5 1123 aaKnown RBP34.52■■■■□ 3.12
Snrnp40-201ENSMUST00000105994 Gab3Q8BSM5 595 aa34.45■■■■□ 3.1
Snrnp40-201ENSMUST00000105994 Rapgef2Q8CHG7 1496 aa34.44■■■■□ 3.1
Snrnp40-201ENSMUST00000105994 AqrQ8CFQ3 1481 aaKnown RBP34.44■■■■□ 3.1
Snrnp40-201ENSMUST00000105994 SynmQ70IV5 1561 aa34.37■■■■□ 3.09
Snrnp40-201ENSMUST00000105994 Pla2r1Q62028 1487 aa34.34■■■■□ 3.09
Snrnp40-201ENSMUST00000105994 Gpatch8A2A6A1 1505 aa34.33■■■■□ 3.09
Snrnp40-201ENSMUST00000105994 Zcchc11B2RX14 1644 aaKnown RBP34.31■■■■□ 3.08
Snrnp40-201ENSMUST00000105994 Fgd6Q69ZL1 1399 aa34.27■■■■□ 3.08
Snrnp40-201ENSMUST00000105994 Eif4g1Q6NZJ6 1600 aaKnown RBP34.2■■■■□ 3.06
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms