RNA–Protein interactions for RNA: ENSMUST00000052708.6

Ckap2l-201, Transcript of Cytoskeleton-associated protein 2-like, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap2l, Length 3,137 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2l-201ENSMUST00000052708 Pik3c2bE9QAN8 1632 aa12.49□□□□□ -0.41
Ckap2l-201ENSMUST00000052708 Smg6P61406 1418 aaKnown RBP12.49□□□□□ -0.41
Ckap2l-201ENSMUST00000052708 PzpQ61838 1495 aa12.49□□□□□ -0.41
Ckap2l-201ENSMUST00000052708 Os9Q8K2C7 672 aa12.48□□□□□ -0.41
Ckap2l-201ENSMUST00000052708 PrxO55103 1391 aa12.48□□□□□ -0.41
Ckap2l-201ENSMUST00000052708 Txndc2Q6P902 515 aa12.48□□□□□ -0.41
Ckap2l-201ENSMUST00000052708 MyclP10166 368 aa12.47□□□□□ -0.41
Ckap2l-201ENSMUST00000052708 Fam71e1A1L3C1 212 aa12.47□□□□□ -0.41
Ckap2l-201ENSMUST00000052708 Pik3r4Q8VD65 1358 aa12.47□□□□□ -0.41
Ckap2l-201ENSMUST00000052708 P3h3Q8CG70 732 aa12.46□□□□□ -0.41
Ckap2l-201ENSMUST00000052708 C5P06684 1680 aa12.46□□□□□ -0.41
Ckap2l-201ENSMUST00000052708 Als2Q920R0 1651 aa12.46□□□□□ -0.41
Ckap2l-201ENSMUST00000052708 InsrP15208 1372 aa12.46□□□□□ -0.42
Ckap2l-201ENSMUST00000052708 Psme1P97371 249 aa12.46□□□□□ -0.42
Ckap2l-201ENSMUST00000052708 Rreb1Q3UH06 1700 aaKnown RBP12.45□□□□□ -0.42
Ckap2l-201ENSMUST00000052708 N4bp2F8VQG7 1678 aaKnown RBP12.45□□□□□ -0.42
Ckap2l-201ENSMUST00000052708 Tnrc6bQ8BKI2 1810 aaKnown RBP12.45□□□□□ -0.42
Ckap2l-201ENSMUST00000052708 Ltbp4Q8K4G1 1666 aa12.44□□□□□ -0.42
Ckap2l-201ENSMUST00000052708 Nrxn1Q9CS84 1514 aa12.44□□□□□ -0.42
Ckap2l-201ENSMUST00000052708 NalcnQ8BXR5 1738 aa12.44□□□□□ -0.42
Ckap2l-201ENSMUST00000052708 Unc13bQ9Z1N9 1602 aa12.44□□□□□ -0.42
Ckap2l-201ENSMUST00000052708 GphnQ8BUV3 769 aaKnown RBP12.44□□□□□ -0.42
Ckap2l-201ENSMUST00000052708 Stk26Q99JT2 416 aa12.44□□□□□ -0.42
Ckap2l-201ENSMUST00000052708 Nrxn3Q6P9K9 1571 aa12.43□□□□□ -0.42
Ckap2l-201ENSMUST00000052708 Tnnt3Q9QZ47 272 aa12.43□□□□□ -0.42
Ckap2l-201ENSMUST00000052708 Stag3O70576 1240 aa12.43□□□□□ -0.42
Ckap2l-201ENSMUST00000052708 Atp1b4Q99ME6 356 aa12.43□□□□□ -0.42
Ckap2l-201ENSMUST00000052708 IqubQ8CDK3 788 aa12.4□□□□□ -0.42
Ckap2l-201ENSMUST00000052708 Pank3Q8R2W9 370 aa12.4□□□□□ -0.42
Ckap2l-201ENSMUST00000052708 Utp14aQ640M1 767 aaKnown RBP12.4□□□□□ -0.42
Ckap2l-201ENSMUST00000052708 Adgrl1Q80TR1 1466 aa12.39□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 Slc4a1apE9PX68 744 aa12.39□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 CenpjQ569L8 1344 aa12.39□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 Mon2Q80TL7 1715 aa12.39□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 Gm13695A2AK44 830 aa12.38□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 C3P01027 1663 aa12.38□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 Col14a1Q80X19 1797 aa12.38□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 Arid4bA2CG63 1314 aaKnown RBP12.38□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 Inpp5dQ9ES52 1191 aa12.37□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 Mink1Q9JM52 1308 aa12.37□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 Col18a1P39061 1774 aa12.37□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 Fam184bQ0KK56 942 aa12.37□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 Zranb1Q7M760 708 aa12.37□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 Tmf1B9EKI3 1091 aa12.36□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 Atp2b2Q9R0K7 1198 aa12.36□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 Gprasp1Q5U4C1 1347 aa12.36□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 Zscan10Q3URR7 782 aa12.35□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 Sipa1l2Q80TE4 1722 aa12.35□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 Slc24a1Q91WD8 1130 aa12.35□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 HnrnpmQ9D0E1 729 aaKnown RBP12.34□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 Abcc10Q8R4P9 1501 aa12.34□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 Kif1aP33173 1695 aa12.34□□□□□ -0.43
Ckap2l-201ENSMUST00000052708 KdrP35918 1367 aa12.33□□□□□ -0.44
Ckap2l-201ENSMUST00000052708 Tex14Q7M6U3 1450 aa12.33□□□□□ -0.44
Ckap2l-201ENSMUST00000052708 Cdk19Q8BWD8 501 aa12.33□□□□□ -0.44
Ckap2l-201ENSMUST00000052708 SafbD3YXK2 937 aaKnown RBP12.33□□□□□ -0.44
Ckap2l-201ENSMUST00000052708 Mdc1Q5PSV9 1707 aa12.33□□□□□ -0.44
Ckap2l-201ENSMUST00000052708 Tns3Q5SSZ5 1440 aa12.32□□□□□ -0.44
Ckap2l-201ENSMUST00000052708 PtpruB1AUH1 1446 aa12.32□□□□□ -0.44
Ckap2l-201ENSMUST00000052708 Exoc6Q8R313 802 aa12.31□□□□□ -0.44
Ckap2l-201ENSMUST00000052708 Iqsec2Q5DU25 1478 aa12.3□□□□□ -0.44
Ckap2l-201ENSMUST00000052708 Cnga1P29974 684 aa12.3□□□□□ -0.44
Ckap2l-201ENSMUST00000052708 Wnk3Q80XP9 1757 aa12.3□□□□□ -0.44
Ckap2l-201ENSMUST00000052708 Pik3c2aQ61194 1686 aa12.3□□□□□ -0.44
Ckap2l-201ENSMUST00000052708 Gli3Q61602 1583 aa12.29□□□□□ -0.44
Ckap2l-201ENSMUST00000052708 Wwc2Q6NXJ0 1187 aa12.29□□□□□ -0.44
Ckap2l-201ENSMUST00000052708 Map3k19E9Q3S4 1311 aa12.29□□□□□ -0.44
Ckap2l-201ENSMUST00000052708 PnisrA2AJT4 805 aaKnown RBP12.29□□□□□ -0.44
Ckap2l-201ENSMUST00000052708 Gsto1O09131 240 aa12.29□□□□□ -0.44
Ckap2l-201ENSMUST00000052708 Chd4Q6PDQ2 1915 aaKnown RBP12.28□□□□□ -0.44
Ckap2l-201ENSMUST00000052708 Slc4a2P13808 1237 aaKnown RBP12.27□□□□□ -0.44
Ckap2l-201ENSMUST00000052708 Q3UJC8 639 aa12.27□□□□□ -0.44
Ckap2l-201ENSMUST00000052708 Ubr1O70481 1757 aa12.27□□□□□ -0.45
Ckap2l-201ENSMUST00000052708 Camta1A2A891 1682 aa12.27□□□□□ -0.45
Ckap2l-201ENSMUST00000052708 Scn7aB1AYL1 1681 aa12.27□□□□□ -0.45
Ckap2l-201ENSMUST00000052708 Rtl5Q5DTT4 599 aa12.26□□□□□ -0.45
Ckap2l-201ENSMUST00000052708 Sirt1Q923E4 737 aa12.26□□□□□ -0.45
Ckap2l-201ENSMUST00000052708 NinlQ6ZQ12 1394 aa12.26□□□□□ -0.45
Ckap2l-201ENSMUST00000052708 Anp32aO35381 247 aa12.26□□□□□ -0.45
Ckap2l-201ENSMUST00000052708 FanciQ8K368 1330 aa12.25□□□□□ -0.45
Ckap2l-201ENSMUST00000052708 Tmem94Q7TSH8 1360 aa12.25□□□□□ -0.45
Ckap2l-201ENSMUST00000052708 Kif7B7ZNG0 1348 aa12.25□□□□□ -0.45
Ckap2l-201ENSMUST00000052708 Rpgrip1lQ8CG73 1264 aa12.24□□□□□ -0.45
Ckap2l-201ENSMUST00000052708 Exosc9Q9JHI7 438 aaKnown RBP12.24□□□□□ -0.45
Ckap2l-201ENSMUST00000052708 Rab3gap2Q8BMG7 1366 aa12.24□□□□□ -0.45
Ckap2l-201ENSMUST00000052708 Ppp2r1aQ76MZ3 589 aa12.23□□□□□ -0.45
Ckap2l-201ENSMUST00000052708 Map2P20357 1828 aa12.23□□□□□ -0.45
Ckap2l-201ENSMUST00000052708 Col16a1Q8BLX7 1580 aa12.23□□□□□ -0.45
Ckap2l-201ENSMUST00000052708 Dcaf11Q91VU6 549 aa12.22□□□□□ -0.45
Ckap2l-201ENSMUST00000052708 PrkcshO08795 521 aa12.22□□□□□ -0.45
Ckap2l-201ENSMUST00000052708 Idi2Q8BFZ6 227 aa12.22□□□□□ -0.45
Ckap2l-201ENSMUST00000052708 Mrs2Q5NCE8 434 aa12.21□□□□□ -0.45
Ckap2l-201ENSMUST00000052708 Q7TT23 1179 aa12.21□□□□□ -0.45
Ckap2l-201ENSMUST00000052708 Idi1P58044 227 aa12.2□□□□□ -0.46
Ckap2l-201ENSMUST00000052708 Rapgef3Q8VCC8 918 aa12.2□□□□□ -0.46
Ckap2l-201ENSMUST00000052708 Gm10563F6WIE4 79 aa12.2□□□□□ -0.46
Ckap2l-201ENSMUST00000052708 Amigo3Q8C2S7 508 aa12.2□□□□□ -0.46
Ckap2l-201ENSMUST00000052708 P2rx7Q9Z1M0 595 aa12.2□□□□□ -0.46
Ckap2l-201ENSMUST00000052708 PtprvP70289 1705 aa12.2□□□□□ -0.46
Ckap2l-201ENSMUST00000052708 Robo1O89026 1612 aa12.18□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms