RNA–Protein interactions for RNA: ENSMUST00000052708.6

Ckap2l-201, Transcript of Cytoskeleton-associated protein 2-like, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap2l, Length 3,137 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2l-201ENSMUST00000052708 Gm35339A0A140LHH9 1649 aa19.71■□□□□ 0.75
Ckap2l-201ENSMUST00000052708 NischQ80TM9 1593 aa19.47■□□□□ 0.71
Ckap2l-201ENSMUST00000052708 Abcc9P70170 1546 aa18.96■□□□□ 0.63
Ckap2l-201ENSMUST00000052708 Abcc8B2RUS7 1588 aa18.73■□□□□ 0.59
Ckap2l-201ENSMUST00000052708 ScribQ80U72 1612 aa17.88■□□□□ 0.45
Ckap2l-201ENSMUST00000052708 Dcaf1Q80TR8 1506 aa17.37■□□□□ 0.37
Ckap2l-201ENSMUST00000052708 Kdm5dQ62240 1548 aa17.31■□□□□ 0.36
Ckap2l-201ENSMUST00000052708 NacadQ5SWP3 1504 aa17.2■□□□□ 0.34
Ckap2l-201ENSMUST00000052708 Rb1cc1Q9ESK9 1588 aa17.03■□□□□ 0.32
Ckap2l-201ENSMUST00000052708 Ccdc180J3QNE4 1664 aa16.99■□□□□ 0.31
Ckap2l-201ENSMUST00000052708 Rhox8Q6VSS7 320 aa16.97■□□□□ 0.31
Ckap2l-201ENSMUST00000052708 Sycp2Q9CUU3 1500 aa16.88■□□□□ 0.29
Ckap2l-201ENSMUST00000052708 Baz1aO88379 1555 aa16.82■□□□□ 0.28
Ckap2l-201ENSMUST00000052708 BicraF8VPZ9 1578 aa16.67■□□□□ 0.26
Ckap2l-201ENSMUST00000052708 Crybg2B7ZCC2 1516 aa16.65■□□□□ 0.26
Ckap2l-201ENSMUST00000052708 Rtl1Q7M732 1744 aa16.63■□□□□ 0.25
Ckap2l-201ENSMUST00000052708 Smarca2Q6DIC0 1577 aa16.43■□□□□ 0.22
Ckap2l-201ENSMUST00000052708 Zcchc6Q5BLK4 1491 aaKnown RBP16.35■□□□□ 0.21
Ckap2l-201ENSMUST00000052708 Cecr2E9Q2Z1 1453 aa16.13■□□□□ 0.17
Ckap2l-201ENSMUST00000052708 Smarca4Q3TKT4 1613 aaKnown RBP16.01■□□□□ 0.15
Ckap2l-201ENSMUST00000052708 Synj1Q8CHC4 1574 aa15.9■□□□□ 0.14
Ckap2l-201ENSMUST00000052708 Ccdc136Q3TVA9 1136 aa15.87■□□□□ 0.13
Ckap2l-201ENSMUST00000052708 Pds5bQ4VA53 1446 aaKnown RBP15.87■□□□□ 0.13
Ckap2l-201ENSMUST00000052708 Atad2bE9Q166 1460 aaKnown RBP15.87■□□□□ 0.13
Ckap2l-201ENSMUST00000052708 Iqgap2Q3UQ44 1575 aa15.86■□□□□ 0.13
Ckap2l-201ENSMUST00000052708 Cttnbp2B9EJA2 1648 aa15.84■□□□□ 0.13
Ckap2l-201ENSMUST00000052708 CftrP26361 1476 aa15.81■□□□□ 0.12
Ckap2l-201ENSMUST00000052708 Brd4Q9ESU6 1400 aaKnown RBP15.8■□□□□ 0.12
Ckap2l-201ENSMUST00000052708 Thoc2B1AZI6 1594 aaKnown RBP15.76■□□□□ 0.11
Ckap2l-201ENSMUST00000052708 Wdr62Q3U3T8 1523 aa15.66■□□□□ 0.1
Ckap2l-201ENSMUST00000052708 Unc13aQ4KUS2 1712 aa15.63■□□□□ 0.09
Ckap2l-201ENSMUST00000052708 Frmpd1A2AKB4 1549 aa15.62■□□□□ 0.09
Ckap2l-201ENSMUST00000052708 Trim41Q5NCC3 630 aa15.6■□□□□ 0.09
Ckap2l-201ENSMUST00000052708 Top2bQ64511 1612 aa15.57■□□□□ 0.08
Ckap2l-201ENSMUST00000052708 Ercc6F8VPZ5 1481 aa15.54■□□□□ 0.08
Ckap2l-201ENSMUST00000052708 Golga3P55937 1487 aa15.48■□□□□ 0.07
Ckap2l-201ENSMUST00000052708 Cc2d2aQ8CFW7 1633 aa15.46■□□□□ 0.07
Ckap2l-201ENSMUST00000052708 Fam135aQ6NS59 1506 aa15.45■□□□□ 0.06
Ckap2l-201ENSMUST00000052708 TnnQ80Z71 1560 aa15.34■□□□□ 0.05
Ckap2l-201ENSMUST00000052708 Dnajc5bQ9CQ94 199 aa15.33■□□□□ 0.05
Ckap2l-201ENSMUST00000052708 Lamc3Q9R0B6 1581 aa15.29■□□□□ 0.04
Ckap2l-201ENSMUST00000052708 Phldb1Q6PDH0 1371 aaKnown RBP15.28■□□□□ 0.04
Ckap2l-201ENSMUST00000052708 Rsf1E9PWW9 1441 aaKnown RBP15.27■□□□□ 0.03
Ckap2l-201ENSMUST00000052708 Esf1Q3V1V3 845 aaKnown RBP15.26■□□□□ 0.03
Ckap2l-201ENSMUST00000052708 Ccdc88bQ4QRL3 1481 aa15.25■□□□□ 0.03
Ckap2l-201ENSMUST00000052708 HrcG5E8J6 738 aa15.23■□□□□ 0.03
Ckap2l-201ENSMUST00000052708 Cngb1E1AZ71 1325 aa15.21■□□□□ 0.03
Ckap2l-201ENSMUST00000052708 Fmn1Q05860 1466 aa15.21■□□□□ 0.03
Ckap2l-201ENSMUST00000052708 Baz1bQ9Z277 1479 aa15.17■□□□□ 0.02
Ckap2l-201ENSMUST00000052708 Top2aQ01320 1528 aaKnown RBP15.11■□□□□ 0.01
Ckap2l-201ENSMUST00000052708 Cep164Q5DU05 1446 aa15.11■□□□□ 0.01
Ckap2l-201ENSMUST00000052708 Chic1Q8CBW7 227 aa15.1■□□□□ 0.01
Ckap2l-201ENSMUST00000052708 Camsap1A2AHC3 1581 aa15.07■□□□□ 0
Ckap2l-201ENSMUST00000052708 Kif15Q6P9L6 1387 aa15.07■□□□□ 0
Ckap2l-201ENSMUST00000052708 Ubl4bQ9CQ84 188 aa15.01□□□□□ -0.01
Ckap2l-201ENSMUST00000052708 Cux2P70298 1426 aa14.99□□□□□ -0.01
Ckap2l-201ENSMUST00000052708 Mrc2Q64449 1479 aa14.99□□□□□ -0.01
Ckap2l-201ENSMUST00000052708 Kif21aQ9QXL2 1672 aa14.94□□□□□ -0.02
Ckap2l-201ENSMUST00000052708 Ccdc18Q640L5 1455 aa14.88□□□□□ -0.03
Ckap2l-201ENSMUST00000052708 Grin2bQ01097 1482 aa14.86□□□□□ -0.03
Ckap2l-201ENSMUST00000052708 Eif4g1Q6NZJ6 1600 aaKnown RBP14.84□□□□□ -0.03
Ckap2l-201ENSMUST00000052708 Rapgef2Q8CHG7 1496 aa14.82□□□□□ -0.04
Ckap2l-201ENSMUST00000052708 Rpgrip1Q9EPQ2 1331 aa14.81□□□□□ -0.04
Ckap2l-201ENSMUST00000052708 PtprkP35822 1457 aa14.8□□□□□ -0.04
Ckap2l-201ENSMUST00000052708 NrkQ9R0G8 1455 aa14.8□□□□□ -0.04
Ckap2l-201ENSMUST00000052708 PogzQ8BZH4 1409 aaKnown RBP14.77□□□□□ -0.05
Ckap2l-201ENSMUST00000052708 Shroom4Q1W617 1475 aa14.76□□□□□ -0.05
Ckap2l-201ENSMUST00000052708 Lrriq1Q0P5X1 1673 aa14.76□□□□□ -0.05
Ckap2l-201ENSMUST00000052708 LrpprcQ6PB66 1392 aaKnown RBP14.75□□□□□ -0.05
Ckap2l-201ENSMUST00000052708 Crocc2F6XLV1 1638 aa14.74□□□□□ -0.05
Ckap2l-201ENSMUST00000052708 Samd9lQ69Z37 1561 aa14.72□□□□□ -0.05
Ckap2l-201ENSMUST00000052708 Duox2A2AQ99 1517 aa14.71□□□□□ -0.05
Ckap2l-201ENSMUST00000052708 Il27Q8K3I6 234 aa14.7□□□□□ -0.06
Ckap2l-201ENSMUST00000052708 Dhx29Q6PGC1 1365 aaKnown RBP14.7□□□□□ -0.06
Ckap2l-201ENSMUST00000052708 Npm1Q61937 292 aaKnown RBP14.69□□□□□ -0.06
Ckap2l-201ENSMUST00000052708 Gab3Q8BSM5 595 aa14.67□□□□□ -0.06
Ckap2l-201ENSMUST00000052708 Efcab5A0JP43 1406 aa14.65□□□□□ -0.06
Ckap2l-201ENSMUST00000052708 Urb2E9Q7L1 1524 aaKnown RBP14.65□□□□□ -0.06
Ckap2l-201ENSMUST00000052708 Arhgap35Q91YM2 1499 aa14.64□□□□□ -0.07
Ckap2l-201ENSMUST00000052708 Cep162Q6ZQ06 1403 aa14.64□□□□□ -0.07
Ckap2l-201ENSMUST00000052708 Setd1bQ8CFT2 1985 aa14.64□□□□□ -0.07
Ckap2l-201ENSMUST00000052708 Plb1Q3TTY0 1478 aa14.6□□□□□ -0.07
Ckap2l-201ENSMUST00000052708 Gpatch8A2A6A1 1505 aa14.59□□□□□ -0.07
Ckap2l-201ENSMUST00000052708 Mroh2bQ7M6Y6 1581 aa14.59□□□□□ -0.07
Ckap2l-201ENSMUST00000052708 Map3k1P53349 1493 aa14.59□□□□□ -0.07
Ckap2l-201ENSMUST00000052708 SynmQ70IV5 1561 aa14.57□□□□□ -0.08
Ckap2l-201ENSMUST00000052708 Eif4g3Q80XI3 1579 aaKnown RBP14.53□□□□□ -0.08
Ckap2l-201ENSMUST00000052708 Pbrm1Q8BSQ9 1634 aaKnown RBP14.53□□□□□ -0.08
Ckap2l-201ENSMUST00000052708 Magi3Q9EQJ9 1476 aa14.53□□□□□ -0.08
Ckap2l-201ENSMUST00000052708 AqrQ8CFQ3 1481 aaKnown RBP14.53□□□□□ -0.08
Ckap2l-201ENSMUST00000052708 Disp1Q3TDN0 1521 aa14.52□□□□□ -0.09
Ckap2l-201ENSMUST00000052708 Rad54l2Q99NG0 1466 aa14.5□□□□□ -0.09
Ckap2l-201ENSMUST00000052708 Pla2r1Q62028 1487 aa14.49□□□□□ -0.09
Ckap2l-201ENSMUST00000052708 Ift140E9PY46 1464 aa14.47□□□□□ -0.09
Ckap2l-201ENSMUST00000052708 Grin2aP35436 1464 aa14.45□□□□□ -0.1
Ckap2l-201ENSMUST00000052708 Nup160Q9Z0W3 1402 aaKnown RBP14.45□□□□□ -0.1
Ckap2l-201ENSMUST00000052708 Erich3F6QRE9 1637 aa14.43□□□□□ -0.1
Ckap2l-201ENSMUST00000052708 Npm2Q80W85 207 aa14.43□□□□□ -0.1
Ckap2l-201ENSMUST00000052708 Rusc2Q80U22 1514 aa14.42□□□□□ -0.1
Ckap2l-201ENSMUST00000052708 Ankrd26Q811D2 1581 aa14.42□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms