RNA–Protein interactions for RNA: ENSMUST00000029838.10

Rpf1-201, Transcript of Ribosome production factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rpf1, Length 1,661 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-201ENSMUST00000029838 GphnQ8BUV3 769 aaKnown RBP22.84■■□□□ 1.25
Rpf1-201ENSMUST00000029838 Zscan21Q07231 555 aa22.84■■□□□ 1.25
Rpf1-201ENSMUST00000029838 Rpgrip1lQ8CG73 1264 aa22.84■■□□□ 1.25
Rpf1-201ENSMUST00000029838 Atp2b2Q9R0K7 1198 aa22.84■■□□□ 1.25
Rpf1-201ENSMUST00000029838 Gsto1O09131 240 aa22.83■■□□□ 1.24
Rpf1-201ENSMUST00000029838 Gprasp1Q5U4C1 1347 aa22.82■■□□□ 1.24
Rpf1-201ENSMUST00000029838 Mink1Q9JM52 1308 aa22.82■■□□□ 1.24
Rpf1-201ENSMUST00000029838 Cnga1P29974 684 aa22.82■■□□□ 1.24
Rpf1-201ENSMUST00000029838 Znf710Q3U288 666 aa22.82■■□□□ 1.24
Rpf1-201ENSMUST00000029838 Dcaf11Q91VU6 549 aa22.82■■□□□ 1.24
Rpf1-201ENSMUST00000029838 Cep170bQ80U49 1574 aa22.82■■□□□ 1.24
Rpf1-201ENSMUST00000029838 Rab3gap2Q8BMG7 1366 aa22.81■■□□□ 1.24
Rpf1-201ENSMUST00000029838 Kif7B7ZNG0 1348 aa22.81■■□□□ 1.24
Rpf1-201ENSMUST00000029838 Slit3Q9WVB4 1523 aa22.8■■□□□ 1.24
Rpf1-201ENSMUST00000029838 PzpQ61838 1495 aa22.8■■□□□ 1.24
Rpf1-201ENSMUST00000029838 Pik3r4Q8VD65 1358 aa22.79■■□□□ 1.24
Rpf1-201ENSMUST00000029838 Ppp2r1aQ76MZ3 589 aa22.79■■□□□ 1.24
Rpf1-201ENSMUST00000029838 FanciQ8K368 1330 aa22.78■■□□□ 1.24
Rpf1-201ENSMUST00000029838 Tex14Q7M6U3 1450 aa22.78■■□□□ 1.24
Rpf1-201ENSMUST00000029838 4930407I10RikD3Z5T8 1512 aa22.77■■□□□ 1.24
Rpf1-201ENSMUST00000029838 Lmtk3Q5XJV6 1424 aa22.77■■□□□ 1.24
Rpf1-201ENSMUST00000029838 Cdk19Q8BWD8 501 aa22.77■■□□□ 1.24
Rpf1-201ENSMUST00000029838 Asxl2Q8BZ32 1370 aa22.76■■□□□ 1.23
Rpf1-201ENSMUST00000029838 MlecQ6ZQI3 291 aaKnown RBP22.74■■□□□ 1.23
Rpf1-201ENSMUST00000029838 Abca14E9Q8F8 1683 aa22.74■■□□□ 1.23
Rpf1-201ENSMUST00000029838 KdrP35918 1367 aa22.73■■□□□ 1.23
Rpf1-201ENSMUST00000029838 Q7TT23 1179 aa22.72■■□□□ 1.23
Rpf1-201ENSMUST00000029838 Nlrp6Q91WS2 869 aa22.72■■□□□ 1.23
Rpf1-201ENSMUST00000029838 Alpk3Q924C5 1678 aa22.71■■□□□ 1.23
Rpf1-201ENSMUST00000029838 Atf7ipQ7TT18 1306 aa22.71■■□□□ 1.23
Rpf1-201ENSMUST00000029838 Cps1Q8C196 1500 aa22.7■■□□□ 1.22
Rpf1-201ENSMUST00000029838 Nwd1A6H603 1563 aa22.69■■□□□ 1.22
Rpf1-201ENSMUST00000029838 Mak16Q8BGS0 296 aaKnown RBP22.68■■□□□ 1.22
Rpf1-201ENSMUST00000029838 Arap3Q8R5G7 1538 aa22.67■■□□□ 1.22
Rpf1-201ENSMUST00000029838 Nrxn1Q9CS84 1514 aa22.67■■□□□ 1.22
Rpf1-201ENSMUST00000029838 HnrnpmQ9D0E1 729 aaKnown RBP22.66■■□□□ 1.22
Rpf1-201ENSMUST00000029838 NktrP30415 1453 aa22.65■■□□□ 1.22
Rpf1-201ENSMUST00000029838 IghaA0A0A6YXW6 389 aa22.65■■□□□ 1.22
Rpf1-201ENSMUST00000029838 Adgrl1Q80TR1 1466 aa22.65■■□□□ 1.22
Rpf1-201ENSMUST00000029838 Ofd1Q80Z25 1017 aa22.65■■□□□ 1.22
Rpf1-201ENSMUST00000029838 Prdm10Q3UTQ7 1184 aa22.64■■□□□ 1.21
Rpf1-201ENSMUST00000029838 Sirt1Q923E4 737 aa22.62■■□□□ 1.21
Rpf1-201ENSMUST00000029838 Topaz1E5FYH1 1653 aa22.61■■□□□ 1.21
Rpf1-201ENSMUST00000029838 Idi2Q8BFZ6 227 aa22.59■■□□□ 1.21
Rpf1-201ENSMUST00000029838 Cald1E9QA15 768 aaKnown RBP22.58■■□□□ 1.21
Rpf1-201ENSMUST00000029838 Q3UJC8 639 aa22.57■■□□□ 1.2
Rpf1-201ENSMUST00000029838 Zranb1Q7M760 708 aa22.57■■□□□ 1.2
Rpf1-201ENSMUST00000029838 Scaf11E9PZM7 1456 aaKnown RBP22.57■■□□□ 1.2
Rpf1-201ENSMUST00000029838 Rreb1Q3UH06 1700 aaKnown RBP22.56■■□□□ 1.2
Rpf1-201ENSMUST00000029838 Map3k19E9Q3S4 1311 aa22.56■■□□□ 1.2
Rpf1-201ENSMUST00000029838 IbtkQ6ZPR6 1352 aaKnown RBP22.55■■□□□ 1.2
Rpf1-201ENSMUST00000029838 NinlQ6ZQ12 1394 aa22.53■■□□□ 1.2
Rpf1-201ENSMUST00000029838 PtpruB1AUH1 1446 aa22.53■■□□□ 1.2
Rpf1-201ENSMUST00000029838 Usp32F8VPZ3 1604 aa22.53■■□□□ 1.2
Rpf1-201ENSMUST00000029838 Tnrc6bQ8BKI2 1810 aaKnown RBP22.52■■□□□ 1.2
Rpf1-201ENSMUST00000029838 Esx1O88933 382 aa22.52■■□□□ 1.2
Rpf1-201ENSMUST00000029838 Eif5bQ05D44 1216 aaKnown RBP22.52■■□□□ 1.2
Rpf1-201ENSMUST00000029838 Pik3c2bE9QAN8 1632 aa22.5■■□□□ 1.19
Rpf1-201ENSMUST00000029838 CatipB9EKE5 520 aa22.5■■□□□ 1.19
Rpf1-201ENSMUST00000029838 Rimbp3Q3V0F0 1606 aa22.5■■□□□ 1.19
Rpf1-201ENSMUST00000029838 GsdmaQ9EST1 446 aa22.48■■□□□ 1.19
Rpf1-201ENSMUST00000029838 Kif20bQ80WE4 1774 aaKnown RBP22.47■■□□□ 1.19
Rpf1-201ENSMUST00000029838 Upf2A2AT37 1269 aaKnown RBP22.47■■□□□ 1.19
Rpf1-201ENSMUST00000029838 Rims2Q9EQZ7 1530 aa22.46■■□□□ 1.19
Rpf1-201ENSMUST00000029838 Znf335A2A5K6 1337 aa22.46■■□□□ 1.19
Rpf1-201ENSMUST00000029838 Znf316Q6PGE4 1016 aa22.46■■□□□ 1.19
Rpf1-201ENSMUST00000029838 Golga2Q921M4 999 aa22.46■■□□□ 1.19
Rpf1-201ENSMUST00000029838 D430041D05RikF6ZGR6 1678 aa22.44■■□□□ 1.18
Rpf1-201ENSMUST00000029838 Map4k4P97820 1233 aaKnown RBP22.42■■□□□ 1.18
Rpf1-201ENSMUST00000029838 Zfp444Q3TDV8 331 aaKnown RBP22.42■■□□□ 1.18
Rpf1-201ENSMUST00000029838 Med1Q925J9 1575 aa22.41■■□□□ 1.18
Rpf1-201ENSMUST00000029838 Kiaa1107Q80TK0 1369 aa22.4■■□□□ 1.18
Rpf1-201ENSMUST00000029838 Rad21Q61550 635 aaKnown RBP22.4■■□□□ 1.18
Rpf1-201ENSMUST00000029838 N4bp2F8VQG7 1678 aaKnown RBP22.39■■□□□ 1.18
Rpf1-201ENSMUST00000029838 Kif16bB1AVY7 1312 aa22.39■■□□□ 1.18
Rpf1-201ENSMUST00000029838 Gm10563F6WIE4 79 aa22.39■■□□□ 1.17
Rpf1-201ENSMUST00000029838 Hoxb7P09024 217 aa22.39■■□□□ 1.17
Rpf1-201ENSMUST00000029838 Tsen2Q6P7W5 460 aa22.37■■□□□ 1.17
Rpf1-201ENSMUST00000029838 C5P06684 1680 aa22.37■■□□□ 1.17
Rpf1-201ENSMUST00000029838 Kif1aP33173 1695 aa22.37■■□□□ 1.17
Rpf1-201ENSMUST00000029838 Ap3b2Q9JME5 1082 aa22.36■■□□□ 1.17
Rpf1-201ENSMUST00000029838 Csrnp3P59055 597 aa22.36■■□□□ 1.17
Rpf1-201ENSMUST00000029838 Tns3Q5SSZ5 1440 aa22.35■■□□□ 1.17
Rpf1-201ENSMUST00000029838 Calr4Q3TQS0 420 aa22.35■■□□□ 1.17
Rpf1-201ENSMUST00000029838 CrbnQ8C7D2 445 aa22.35■■□□□ 1.17
Rpf1-201ENSMUST00000029838 U2af1Q9D883 239 aaKnown RBP22.35■■□□□ 1.17
Rpf1-201ENSMUST00000029838 P2rx7Q9Z1M0 595 aa22.35■■□□□ 1.17
Rpf1-201ENSMUST00000029838 Phlpp1Q8CHE4 1687 aa22.35■■□□□ 1.17
Rpf1-201ENSMUST00000029838 Als2Q920R0 1651 aa22.35■■□□□ 1.17
Rpf1-201ENSMUST00000029838 Tmem94Q7TSH8 1360 aa22.35■■□□□ 1.17
Rpf1-201ENSMUST00000029838 Astn2Q80Z10 1352 aa22.35■■□□□ 1.17
Rpf1-201ENSMUST00000029838 Nrxn3Q6P9K9 1571 aa22.34■■□□□ 1.17
Rpf1-201ENSMUST00000029838 Iqsec2Q5DU25 1478 aa22.34■■□□□ 1.17
Rpf1-201ENSMUST00000029838 Uspl1Q3ULM6 1089 aa22.33■■□□□ 1.17
Rpf1-201ENSMUST00000029838 Ralbp1Q62172 648 aa22.33■■□□□ 1.17
Rpf1-201ENSMUST00000029838 NgefQ8CHT1 710 aa22.33■■□□□ 1.17
Rpf1-201ENSMUST00000029838 Abcc10Q8R4P9 1501 aa22.33■■□□□ 1.16
Rpf1-201ENSMUST00000029838 Mon2Q80TL7 1715 aa22.32■■□□□ 1.16
Rpf1-201ENSMUST00000029838 Kank1E9Q238 1360 aa22.32■■□□□ 1.16
Rpf1-201ENSMUST00000029838 Speer4f1Q9D5Q6 258 aa22.32■■□□□ 1.16
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms