RNA–Protein interactions for RNA: ENSMUST00000025262.5

Ltb-201, Transcript of Lymphotoxin-beta, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ltb, Length 1,160 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ltb-201ENSMUST00000025262 Farp2Q91VS8 1065 aa28.78■■■□□ 2.2
Ltb-201ENSMUST00000025262 Kcna6Q61923 529 aa28.77■■■□□ 2.2
Ltb-201ENSMUST00000025262 Sipa1l2Q80TE4 1722 aa28.76■■■□□ 2.19
Ltb-201ENSMUST00000025262 N4bp2F8VQG7 1678 aaKnown RBP28.73■■■□□ 2.19
Ltb-201ENSMUST00000025262 Arhgef1Q61210 920 aaKnown RBP28.72■■■□□ 2.19
Ltb-201ENSMUST00000025262 Ddx54Q8K4L0 874 aaKnown RBP28.71■■■□□ 2.19
Ltb-201ENSMUST00000025262 MaddQ80U28 1577 aa28.69■■■□□ 2.18
Ltb-201ENSMUST00000025262 Plxnc1Q9QZC2 1574 aa28.69■■■□□ 2.18
Ltb-201ENSMUST00000025262 Ccdc6D3YZP9 469 aa28.68■■■□□ 2.18
Ltb-201ENSMUST00000025262 Acsbg1Q99PU5 721 aa28.68■■■□□ 2.18
Ltb-201ENSMUST00000025262 Q3UJC8 639 aa28.67■■■□□ 2.18
Ltb-201ENSMUST00000025262 Wnk3Q80XP9 1757 aa28.67■■■□□ 2.18
Ltb-201ENSMUST00000025262 Fam135bQ9DAI6 1403 aa28.67■■■□□ 2.18
Ltb-201ENSMUST00000025262 InhbeO08717 350 aa28.66■■■□□ 2.18
Ltb-201ENSMUST00000025262 UbtfP25976 765 aaKnown RBP28.65■■■□□ 2.18
Ltb-201ENSMUST00000025262 Robo1O89026 1612 aa28.64■■■□□ 2.18
Ltb-201ENSMUST00000025262 Kif20bQ80WE4 1774 aaKnown RBP28.63■■■□□ 2.17
Ltb-201ENSMUST00000025262 Lrrc59Q922Q8 307 aaKnown RBP28.62■■■□□ 2.17
Ltb-201ENSMUST00000025262 Mia2Q91ZV0 1396 aa28.61■■■□□ 2.17
Ltb-201ENSMUST00000025262 Sgsm1Q8BPQ7 1093 aa28.59■■■□□ 2.17
Ltb-201ENSMUST00000025262 Stk26Q99JT2 416 aa28.59■■■□□ 2.17
Ltb-201ENSMUST00000025262 Utp14aQ640M1 767 aaKnown RBP28.58■■■□□ 2.17
Ltb-201ENSMUST00000025262 Psrc1Q9D0P7 329 aa28.56■■■□□ 2.16
Ltb-201ENSMUST00000025262 Atp7bQ64446 1462 aa28.55■■■□□ 2.16
Ltb-201ENSMUST00000025262 D430041D05RikF6ZGR6 1678 aa28.54■■■□□ 2.16
Ltb-201ENSMUST00000025262 Usp32F8VPZ3 1604 aa28.54■■■□□ 2.16
Ltb-201ENSMUST00000025262 Tmem2Q5FWI3 1383 aa28.51■■■□□ 2.16
Ltb-201ENSMUST00000025262 Mroh3A0A1D5RM54 893 aa28.5■■■□□ 2.15
Ltb-201ENSMUST00000025262 Camta1A2A891 1682 aa28.5■■■□□ 2.15
Ltb-201ENSMUST00000025262 Atp10bB1AWN4 1474 aa28.48■■■□□ 2.15
Ltb-201ENSMUST00000025262 Sox12Q04890 314 aa28.47■■■□□ 2.15
Ltb-201ENSMUST00000025262 Rims1Q99NE5 1463 aa28.46■■■□□ 2.15
Ltb-201ENSMUST00000025262 C5P06684 1680 aa28.46■■■□□ 2.15
Ltb-201ENSMUST00000025262 Idi1P58044 227 aa28.46■■■□□ 2.15
Ltb-201ENSMUST00000025262 Kif1aP33173 1695 aa28.45■■■□□ 2.15
Ltb-201ENSMUST00000025262 Mphosph9A6H5Y1 991 aa28.45■■■□□ 2.14
Ltb-201ENSMUST00000025262 Cep170bQ80U49 1574 aa28.44■■■□□ 2.14
Ltb-201ENSMUST00000025262 Grwd1Q810D6 446 aaKnown RBP28.43■■■□□ 2.14
Ltb-201ENSMUST00000025262 Sugp2Q8CH09 1067 aa28.43■■■□□ 2.14
Ltb-201ENSMUST00000025262 Tnks1bp1P58871 1720 aa28.43■■■□□ 2.14
Ltb-201ENSMUST00000025262 PtpruB1AUH1 1446 aa28.43■■■□□ 2.14
Ltb-201ENSMUST00000025262 Als2Q920R0 1651 aa28.42■■■□□ 2.14
Ltb-201ENSMUST00000025262 Cadps2Q8BYR5 1297 aa28.42■■■□□ 2.14
Ltb-201ENSMUST00000025262 Dot1lQ6XZL8 1540 aa28.42■■■□□ 2.14
Ltb-201ENSMUST00000025262 Slc52a2Q9D8F3 450 aa28.41■■■□□ 2.14
Ltb-201ENSMUST00000025262 Hdac5Q9Z2V6 1113 aa28.4■■■□□ 2.14
Ltb-201ENSMUST00000025262 Tnrc6cQ3UHC0 1690 aaKnown RBP28.38■■■□□ 2.13
Ltb-201ENSMUST00000025262 Ltbp1Q8CG19 1712 aa28.37■■■□□ 2.13
Ltb-201ENSMUST00000025262 Washc2Q6PGL7 1334 aa28.37■■■□□ 2.13
Ltb-201ENSMUST00000025262 Sirt1Q923E4 737 aa28.36■■■□□ 2.13
Ltb-201ENSMUST00000025262 Shank2Q80Z38 1476 aa28.35■■■□□ 2.13
Ltb-201ENSMUST00000025262 OscarQ8VBT3 265 aa28.34■■■□□ 2.13
Ltb-201ENSMUST00000025262 Sf3b2Q3UJB0 878 aaKnown RBP28.33■■■□□ 2.13
Ltb-201ENSMUST00000025262 Adamtsl1Q8BLI0 1745 aa28.32■■■□□ 2.12
Ltb-201ENSMUST00000025262 Kiaa0319Q5SZV5 1081 aa28.32■■■□□ 2.12
Ltb-201ENSMUST00000025262 Slc34a2Q9DBP0 697 aa28.32■■■□□ 2.12
Ltb-201ENSMUST00000025262 Wdr17E9Q271 1322 aa28.32■■■□□ 2.12
Ltb-201ENSMUST00000025262 Acin1Q9JIX8 1338 aaKnown RBP28.31■■■□□ 2.12
Ltb-201ENSMUST00000025262 VirmaA2AIV2 1811 aaKnown RBP28.29■■■□□ 2.12
Ltb-201ENSMUST00000025262 Fan1Q69ZT1 1020 aa28.28■■■□□ 2.12
Ltb-201ENSMUST00000025262 Tulp4Q9JIL5 1547 aa28.28■■■□□ 2.12
Ltb-201ENSMUST00000025262 Abca15E9PWH4 1668 aa28.27■■■□□ 2.12
Ltb-201ENSMUST00000025262 Ubap1lG3UW59 384 aa28.27■■■□□ 2.12
Ltb-201ENSMUST00000025262 Pkd2O35245 966 aa28.27■■■□□ 2.12
Ltb-201ENSMUST00000025262 Cdhr2E9Q7P9 1308 aa28.26■■■□□ 2.11
Ltb-201ENSMUST00000025262 NgefQ8CHT1 710 aa28.26■■■□□ 2.11
Ltb-201ENSMUST00000025262 Kdm2aP59997 1161 aa28.25■■■□□ 2.11
Ltb-201ENSMUST00000025262 Lrrc7Q80TE7 1490 aa28.25■■■□□ 2.11
Ltb-201ENSMUST00000025262 Dixdc1Q80Y83 711 aa28.24■■■□□ 2.11
Ltb-201ENSMUST00000025262 Puf60Q3UEB3 564 aaKnown RBP28.23■■■□□ 2.11
Ltb-201ENSMUST00000025262 Txnrd1Q9JMH6 613 aa28.23■■■□□ 2.11
Ltb-201ENSMUST00000025262 Pola1P33609 1465 aa28.22■■■□□ 2.11
Ltb-201ENSMUST00000025262 Plekhg1F6S200 1446 aa28.22■■■□□ 2.11
Ltb-201ENSMUST00000025262 Nfat5Q9WV30 1534 aa28.2■■■□□ 2.1
Ltb-201ENSMUST00000025262 Srpk2O54781 681 aaKnown RBP28.2■■■□□ 2.1
Ltb-201ENSMUST00000025262 Slc35g1Q8BY79 368 aa28.19■■■□□ 2.1
Ltb-201ENSMUST00000025262 Adamts13Q769J6 1426 aa28.18■■■□□ 2.1
Ltb-201ENSMUST00000025262 Ccdc129Q14B48 1034 aa28.18■■■□□ 2.1
Ltb-201ENSMUST00000025262 Ap3b2Q9JME5 1082 aa28.18■■■□□ 2.1
Ltb-201ENSMUST00000025262 Os9Q8K2C7 672 aa28.17■■■□□ 2.1
Ltb-201ENSMUST00000025262 Nrxn1Q9CS84 1514 aa28.17■■■□□ 2.1
Ltb-201ENSMUST00000025262 Col16a1Q8BLX7 1580 aa28.16■■■□□ 2.1
Ltb-201ENSMUST00000025262 Zmym3Q9JLM4 1370 aa28.14■■■□□ 2.1
Ltb-201ENSMUST00000025262 Rtl5Q5DTT4 599 aa28.14■■■□□ 2.1
Ltb-201ENSMUST00000025262 Atp2b2Q9R0K7 1198 aa28.14■■■□□ 2.1
Ltb-201ENSMUST00000025262 Nup153E9Q3G8 1462 aaKnown RBP28.13■■■□□ 2.09
Ltb-201ENSMUST00000025262 Polr3aB2RXC6 1390 aa28.12■■■□□ 2.09
Ltb-201ENSMUST00000025262 Ifit1bl1D3Z6F0 470 aa28.11■■■□□ 2.09
Ltb-201ENSMUST00000025262 Abca14E9Q8F8 1683 aa28.1■■■□□ 2.09
Ltb-201ENSMUST00000025262 Mink1Q9JM52 1308 aa28.1■■■□□ 2.09
Ltb-201ENSMUST00000025262 Ly75Q60767 1723 aa28.09■■■□□ 2.09
Ltb-201ENSMUST00000025262 Fyb1O35601 819 aa28.08■■■□□ 2.09
Ltb-201ENSMUST00000025262 Rock1P70335 1354 aa28.08■■■□□ 2.09
Ltb-201ENSMUST00000025262 Znf316Q6PGE4 1016 aa28.06■■■□□ 2.08
Ltb-201ENSMUST00000025262 PaskQ8CEE6 1383 aa28.06■■■□□ 2.08
Ltb-201ENSMUST00000025262 Cacna1sQ02789 1880 aa28.04■■■□□ 2.08
Ltb-201ENSMUST00000025262 Gm20521D3Z5F7 333 aa28.03■■■□□ 2.08
Ltb-201ENSMUST00000025262 ZgpatQ8VDM1 511 aa28.02■■■□□ 2.08
Ltb-201ENSMUST00000025262 Taok3Q8BYC6 898 aa28.01■■■□□ 2.07
Ltb-201ENSMUST00000025262 Cdk5rap2Q8K389 1822 aa28.01■■■□□ 2.07
Retrieved 100 of 22,080 RNA–protein pairs in 38.6 ms