RNA–Protein interactions for RNA: ENSMUST00000025262.5

Ltb-201, Transcript of Lymphotoxin-beta, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ltb, Length 1,160 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ltb-201ENSMUST00000025262 Gm35339A0A140LHH9 1649 aa46,03■■■■■ 4,96
Ltb-201ENSMUST00000025262 NischQ80TM9 1593 aa45,03■■■■■ 4,8
Ltb-201ENSMUST00000025262 Abcc9P70170 1546 aa44,19■■■■■ 4,66
Ltb-201ENSMUST00000025262 Abcc8B2RUS7 1588 aa43,9■■■■■ 4,62
Ltb-201ENSMUST00000025262 ScribQ80U72 1612 aa43,01■■■■■ 4,48
Ltb-201ENSMUST00000025262 NacadQ5SWP3 1504 aa41,42■■■■■ 4,22
Ltb-201ENSMUST00000025262 Kdm5dQ62240 1548 aa41,32■■■■■ 4,2
Ltb-201ENSMUST00000025262 Dnajc5bQ9CQ94 199 aa41,05■■■■■ 4,16
Ltb-201ENSMUST00000025262 Sycp2Q9CUU3 1500 aa40,72■■■■■ 4,11
Ltb-201ENSMUST00000025262 BicraF8VPZ9 1578 aa40,38■■■■■ 4,05
Ltb-201ENSMUST00000025262 Dcaf1Q80TR8 1506 aa40,12■■■■■ 4,01
Ltb-201ENSMUST00000025262 Thoc2B1AZI6 1594 aaKnown RBP39,51■■■■□ 3,92
Ltb-201ENSMUST00000025262 Pds5bQ4VA53 1446 aaKnown RBP39,37■■■■□ 3,89
Ltb-201ENSMUST00000025262 Rb1cc1Q9ESK9 1588 aa39,15■■■■□ 3,86
Ltb-201ENSMUST00000025262 Cc2d2aQ8CFW7 1633 aa38,81■■■■□ 3,8
Ltb-201ENSMUST00000025262 Atad2bE9Q166 1460 aaKnown RBP38,8■■■■□ 3,8
Ltb-201ENSMUST00000025262 Baz1aO88379 1555 aa38,49■■■■□ 3,75
Ltb-201ENSMUST00000025262 Ercc6F8VPZ5 1481 aa38,49■■■■□ 3,75
Ltb-201ENSMUST00000025262 Crybg2B7ZCC2 1516 aa38,44■■■■□ 3,74
Ltb-201ENSMUST00000025262 Fam135aQ6NS59 1506 aa38,38■■■■□ 3,74
Ltb-201ENSMUST00000025262 Smarca2Q6DIC0 1577 aa38,23■■■■□ 3,71
Ltb-201ENSMUST00000025262 Zcchc6Q5BLK4 1491 aaKnown RBP38,2■■■■□ 3,71
Ltb-201ENSMUST00000025262 Ccdc180J3QNE4 1664 aa38,11■■■■□ 3,69
Ltb-201ENSMUST00000025262 Dnajc5P60904 198 aa38,09■■■■□ 3,69
Ltb-201ENSMUST00000025262 Smarca4Q3TKT4 1613 aaKnown RBP38,03■■■■□ 3,68
Ltb-201ENSMUST00000025262 Iqgap2Q3UQ44 1575 aa38,01■■■■□ 3,67
Ltb-201ENSMUST00000025262 Wdr62Q3U3T8 1523 aa37,87■■■■□ 3,65
Ltb-201ENSMUST00000025262 Frmpd1A2AKB4 1549 aa37,86■■■■□ 3,65
Ltb-201ENSMUST00000025262 Phldb1Q6PDH0 1371 aaKnown RBP37,85■■■■□ 3,65
Ltb-201ENSMUST00000025262 Rhox8Q6VSS7 320 aa37,85■■■■□ 3,65
Ltb-201ENSMUST00000025262 Cecr2E9Q2Z1 1453 aa37,76■■■■□ 3,63
Ltb-201ENSMUST00000025262 Baz1bQ9Z277 1479 aa37,73■■■■□ 3,63
Ltb-201ENSMUST00000025262 Ubl4bQ9CQ84 188 aa37,57■■■■□ 3,6
Ltb-201ENSMUST00000025262 Trim41Q5NCC3 630 aa37,55■■■■□ 3,6
Ltb-201ENSMUST00000025262 Mrc2Q64449 1479 aa37,47■■■■□ 3,59
Ltb-201ENSMUST00000025262 Unc13aQ4KUS2 1712 aa37,17■■■■□ 3,54
Ltb-201ENSMUST00000025262 Lrriq1Q0P5X1 1673 aa36,7■■■■□ 3,47
Ltb-201ENSMUST00000025262 CftrP26361 1476 aa36,62■■■■□ 3,45
Ltb-201ENSMUST00000025262 Rsf1E9PWW9 1441 aaKnown RBP36,59■■■■□ 3,45
Ltb-201ENSMUST00000025262 Cttnbp2B9EJA2 1648 aa36,48■■■■□ 3,43
Ltb-201ENSMUST00000025262 Synj1Q8CHC4 1574 aa36,43■■■■□ 3,42
Ltb-201ENSMUST00000025262 Shroom2A2ALU4 1481 aa36,39■■■■□ 3,42
Ltb-201ENSMUST00000025262 Cux2P70298 1426 aa36,36■■■■□ 3,41
Ltb-201ENSMUST00000025262 Kif21aQ9QXL2 1672 aa36,28■■■■□ 3,4
Ltb-201ENSMUST00000025262 Eif4g3Q80XI3 1579 aaKnown RBP36,16■■■■□ 3,38
Ltb-201ENSMUST00000025262 Col17a1Q07563 1470 aa36,16■■■■□ 3,38
Ltb-201ENSMUST00000025262 Kif15Q6P9L6 1387 aa36,15■■■■□ 3,38
Ltb-201ENSMUST00000025262 Brd4Q9ESU6 1400 aaKnown RBP36,11■■■■□ 3,37
Ltb-201ENSMUST00000025262 Npm1Q61937 292 aaKnown RBP35,82■■■■□ 3,32
Ltb-201ENSMUST00000025262 Esf1Q3V1V3 845 aaKnown RBP35,81■■■■□ 3,32
Ltb-201ENSMUST00000025262 Pabpn1Q8CCS6 302 aaKnown RBP35,8■■■■□ 3,32
Ltb-201ENSMUST00000025262 Urb2E9Q7L1 1524 aaKnown RBP35,74■■■■□ 3,31
Ltb-201ENSMUST00000025262 Lamc3Q9R0B6 1581 aa35,73■■■■□ 3,31
Ltb-201ENSMUST00000025262 Top2bQ64511 1612 aa35,69■■■■□ 3,3
Ltb-201ENSMUST00000025262 Ccdc136Q3TVA9 1136 aa35,68■■■■□ 3,3
Ltb-201ENSMUST00000025262 Plb1Q3TTY0 1478 aa35,64■■■■□ 3,3
Ltb-201ENSMUST00000025262 Cep164Q5DU05 1446 aa35,63■■■■□ 3,29
Ltb-201ENSMUST00000025262 Dhx29Q6PGC1 1365 aaKnown RBP35,53■■■■□ 3,28
Ltb-201ENSMUST00000025262 Pelp1Q9DBD5 1123 aaKnown RBP35,5■■■■□ 3,27
Ltb-201ENSMUST00000025262 Rtl1Q7M732 1744 aa35,44■■■■□ 3,26
Ltb-201ENSMUST00000025262 Zcchc11B2RX14 1644 aaKnown RBP35,36■■■■□ 3,25
Ltb-201ENSMUST00000025262 Rusc2Q80U22 1514 aa35,31■■■■□ 3,24
Ltb-201ENSMUST00000025262 Pcdh10E9PXQ7 1057 aa35,29■■■■□ 3,24
Ltb-201ENSMUST00000025262 Il27Q8K3I6 234 aa35,27■■■■□ 3,24
Ltb-201ENSMUST00000025262 LrpprcQ6PB66 1392 aaKnown RBP35,25■■■■□ 3,23
Ltb-201ENSMUST00000025262 Crocc2F6XLV1 1638 aa35,24■■■■□ 3,23
Ltb-201ENSMUST00000025262 Ift140E9PY46 1464 aa35,16■■■■□ 3,22
Ltb-201ENSMUST00000025262 Ccdc18Q640L5 1455 aa35,16■■■■□ 3,22
Ltb-201ENSMUST00000025262 TnnQ80Z71 1560 aa35,01■■■■□ 3,2
Ltb-201ENSMUST00000025262 Camsap1A2AHC3 1581 aa34,99■■■■□ 3,19
Ltb-201ENSMUST00000025262 PogzQ8BZH4 1409 aaKnown RBP34,97■■■■□ 3,19
Ltb-201ENSMUST00000025262 Arhgef5E9Q7D5 1581 aa34,96■■■■□ 3,19
Ltb-201ENSMUST00000025262 Adgrl3Q80TS3 1537 aa34,92■■■■□ 3,18
Ltb-201ENSMUST00000025262 Disp1Q3TDN0 1521 aa34,84■■■■□ 3,17
Ltb-201ENSMUST00000025262 Ttbk1Q6PCN3 1308 aa34,8■■■■□ 3,16
Ltb-201ENSMUST00000025262 Duox2A2AQ99 1517 aa34,76■■■■□ 3,16
Ltb-201ENSMUST00000025262 PtprkP35822 1457 aa34,72■■■■□ 3,15
Ltb-201ENSMUST00000025262 Nup160Q9Z0W3 1402 aaKnown RBP34,69■■■■□ 3,14
Ltb-201ENSMUST00000025262 Gm156Q58A37 223 aa34,68■■■■□ 3,14
Ltb-201ENSMUST00000025262 Cep170Q6A065 1588 aa34,66■■■■□ 3,14
Ltb-201ENSMUST00000025262 Golga3P55937 1487 aa34,66■■■■□ 3,14
Ltb-201ENSMUST00000025262 PtprtQ99M80 1454 aa34,66■■■■□ 3,14
Ltb-201ENSMUST00000025262 Cc2d2bA0A286YDU8 1405 aa34,64■■■■□ 3,14
Ltb-201ENSMUST00000025262 Gapvd1Q6PAR5 1458 aa34,61■■■■□ 3,13
Ltb-201ENSMUST00000025262 Samd9lQ69Z37 1561 aa34,5■■■■□ 3,11
Ltb-201ENSMUST00000025262 Setd1bQ8CFT2 1985 aa34,49■■■■□ 3,11
Ltb-201ENSMUST00000025262 Fgd6Q69ZL1 1399 aa34,49■■■■□ 3,11
Ltb-201ENSMUST00000025262 Pbrm1Q8BSQ9 1634 aaKnown RBP34,45■■■■□ 3,11
Ltb-201ENSMUST00000025262 Grin2bQ01097 1482 aa34,43■■■■□ 3,1
Ltb-201ENSMUST00000025262 Cngb1E1AZ71 1325 aa34,4■■■■□ 3,1
Ltb-201ENSMUST00000025262 AqrQ8CFQ3 1481 aaKnown RBP34,36■■■■□ 3,09
Ltb-201ENSMUST00000025262 Pprc1Q6NZN1 1644 aa34,36■■■■□ 3,09
Ltb-201ENSMUST00000025262 Rad54l2Q99NG0 1466 aa34,33■■■■□ 3,09
Ltb-201ENSMUST00000025262 Fmn1Q05860 1466 aa34,3■■■■□ 3,08
Ltb-201ENSMUST00000025262 Grin2aP35436 1464 aa34,27■■■■□ 3,08
Ltb-201ENSMUST00000025262 Magi3Q9EQJ9 1476 aa34,25■■■■□ 3,07
Ltb-201ENSMUST00000025262 Abcc1O35379 1528 aa34,23■■■■□ 3,07
Ltb-201ENSMUST00000025262 Ythdc2B2RR83 1445 aaKnown RBP34,22■■■■□ 3,07
Ltb-201ENSMUST00000025262 Efcab5A0JP43 1406 aa34,21■■■■□ 3,07
Ltb-201ENSMUST00000025262 AknaQ80VW7 1404 aa34,21■■■■□ 3,07
Retrieved 100 of 22,080 RNA–protein pairs in 12,2 ms