RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 FNDC3AQ9Y2H6 1198 aaKnown RBP11.07□□□□□ -0.64
CDHR3-209ENST00000472116 CREBBPQ92793 2442 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 COL12A1Q99715 3063 aa11.06□□□□□ -0.64
CDHR3-209ENST00000472116 A0A087WWV3 80 aa11.06□□□□□ -0.64
CDHR3-209ENST00000472116 ANTXRLA6NF34 631 aa11.06□□□□□ -0.64
CDHR3-209ENST00000472116 ENO4A6NNW6 628 aa11.06□□□□□ -0.64
CDHR3-209ENST00000472116 SLC9A3R1O14745 358 aaPredicted RBP11.06□□□□□ -0.64
CDHR3-209ENST00000472116 ADAM23O75077 832 aa11.06□□□□□ -0.64
CDHR3-209ENST00000472116 ADH1CP00326 375 aa11.06□□□□□ -0.64
CDHR3-209ENST00000472116 PAX3P23760 479 aa11.06□□□□□ -0.64
CDHR3-209ENST00000472116 KIR2DL1P43626 348 aaPredicted RBP11.06□□□□□ -0.64
CDHR3-209ENST00000472116 AARSP49588 968 aaKnown RBP eCLIP11.06□□□□□ -0.64
CDHR3-209ENST00000472116 VASPP50552 380 aaPredicted RBP11.06□□□□□ -0.64
CDHR3-209ENST00000472116 KDSRQ06136 332 aa11.06□□□□□ -0.64
CDHR3-209ENST00000472116 SSRP1Q08945 709 aaKnown RBP11.06□□□□□ -0.64
CDHR3-209ENST00000472116 PKDCCQ504Y2 493 aa11.06□□□□□ -0.64
CDHR3-209ENST00000472116 PADI6Q6TGC4 694 aa11.06□□□□□ -0.64
CDHR3-209ENST00000472116 MPZL3Q6UWV2 235 aa11.06□□□□□ -0.64
CDHR3-209ENST00000472116 ZNF513Q8N8E2 541 aaPredicted RBP11.06□□□□□ -0.64
CDHR3-209ENST00000472116 KCNV2Q8TDN2 545 aa11.06□□□□□ -0.64
CDHR3-209ENST00000472116 ACO2Q99798 780 aaKnown RBP11.06□□□□□ -0.64
CDHR3-209ENST00000472116 SEMA4CQ9C0C4 833 aa11.06□□□□□ -0.64
CDHR3-209ENST00000472116 DSEQ9UL01 958 aa11.06□□□□□ -0.64
CDHR3-209ENST00000472116 UBQLN1Q9UMX0 589 aaKnown RBP11.06□□□□□ -0.64
CDHR3-209ENST00000472116 SCN1AP35498 2009 aa11.06□□□□□ -0.64
CDHR3-209ENST00000472116 TBC1D3BA6NDS4 549 aa11.05□□□□□ -0.64
CDHR3-209ENST00000472116 CCDC169A6NNP5 214 aa11.05□□□□□ -0.64
CDHR3-209ENST00000472116 M0R2N6 131 aa11.05□□□□□ -0.64
CDHR3-209ENST00000472116 BCAT2O15382 392 aaPredicted RBP11.05□□□□□ -0.64
CDHR3-209ENST00000472116 DEXIO95424 95 aa11.05□□□□□ -0.64
CDHR3-209ENST00000472116 HMGA1P17096 107 aaKnown RBP11.05□□□□□ -0.64
CDHR3-209ENST00000472116 CYP11B2P19099 503 aa11.05□□□□□ -0.64
CDHR3-209ENST00000472116 HDCP19113 662 aa11.05□□□□□ -0.64
CDHR3-209ENST00000472116 ADSSP30520 456 aa11.05□□□□□ -0.64
CDHR3-209ENST00000472116 LRPAP1P30533 357 aa11.05□□□□□ -0.64
CDHR3-209ENST00000472116 CDR1P51861 262 aa11.05□□□□□ -0.64
CDHR3-209ENST00000472116 RTP5Q14D33 572 aa11.05□□□□□ -0.64
CDHR3-209ENST00000472116 SF3A1Q15459 793 aaKnown RBP11.05□□□□□ -0.64
CDHR3-209ENST00000472116 PTPRNQ16849 979 aa11.05□□□□□ -0.64
CDHR3-209ENST00000472116 ARHGAP40Q5TG30 622 aa11.05□□□□□ -0.64
CDHR3-209ENST00000472116 ZNF574Q6ZN55 896 aaPredicted RBP11.05□□□□□ -0.64
CDHR3-209ENST00000472116 DBX2Q6ZNG2 339 aa11.05□□□□□ -0.64
CDHR3-209ENST00000472116 Q6ZUG5 572 aa11.05□□□□□ -0.64
CDHR3-209ENST00000472116 DCP1BQ8IZD4 617 aaKnown RBP11.05□□□□□ -0.64
CDHR3-209ENST00000472116 ARL14EPQ8N8R7 260 aaPredicted RBP11.05□□□□□ -0.64
CDHR3-209ENST00000472116 OR10T2Q8NGX3 314 aa11.05□□□□□ -0.64
CDHR3-209ENST00000472116 KIFAP3Q92845 792 aa11.05□□□□□ -0.64
CDHR3-209ENST00000472116 BRF1Q92994 677 aa11.05□□□□□ -0.64
CDHR3-209ENST00000472116 CYP2S1Q96SQ9 504 aa11.05□□□□□ -0.64
CDHR3-209ENST00000472116 ZCWPW1Q9H0M4 648 aa11.05□□□□□ -0.64
CDHR3-209ENST00000472116 NFE2L3Q9Y4A8 694 aa11.05□□□□□ -0.64
CDHR3-209ENST00000472116 PCDHB5Q9Y5E4 795 aa11.05□□□□□ -0.64
CDHR3-209ENST00000472116 CPLX1O14810 134 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 PRPF40AO75400 957 aaKnown RBP11.04□□□□□ -0.64
CDHR3-209ENST00000472116 CYP17A1P05093 508 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 NFICP08651 508 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 TCF3P15923 654 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 CYP3A5P20815 502 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 CD6P30203 668 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 NTSR1P30989 418 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 MATR3P43243 847 aaKnown RBP eCLIP11.04□□□□□ -0.645e-6■■□□□ 13.3
CDHR3-209ENST00000472116 SLC6A11P48066 632 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 RPL10AP62906 217 aaKnown RBP11.04□□□□□ -0.64
CDHR3-209ENST00000472116 PPP2R3AQ06190 1150 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 DHCR24Q15392 516 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 NTRK3Q16288 839 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 CALCRLQ16602 461 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 BTBD8Q5XKL5 378 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 KIAA1324Q6UXG2 1013 aaKnown RBP11.04□□□□□ -0.64
CDHR3-209ENST00000472116 PIK3AP1Q6ZUJ8 805 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 ZNF248Q8NDW4 579 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 DNASE2BQ8WZ79 361 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 SENP8Q96LD8 212 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 MTMR9Q96QG7 549 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 TRIM4Q9C037 500 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 RPF1Q9H9Y2 349 aaKnown RBP11.04□□□□□ -0.64
CDHR3-209ENST00000472116 ANKMY1Q9P2S6 941 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 ARHGAP26Q9UNA1 814 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 BTBD3Q9Y2F9 522 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 PCDHGA1Q9Y5H4 931 aa11.04□□□□□ -0.64
CDHR3-209ENST00000472116 BRINP1O60477 761 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 RFPL3O75679 317 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 ADH5P11766 374 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 GP1BBP13224 206 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 NCAM1P13591 858 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 XBP1P17861 261 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 NDUFV2P19404 249 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 TXKP42681 527 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 WASP42768 502 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 CCT8P50990 548 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 TSPY1Q01534 308 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 SPAG1Q07617 926 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 MYO1EQ12965 1108 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 TARDBPQ13148 414 aaKnown RBP eCLIP11.03□□□□□ -0.64
CDHR3-209ENST00000472116 NOLC1Q14978 699 aaKnown RBP eCLIP11.03□□□□□ -0.64
CDHR3-209ENST00000472116 TEAD4Q15561 434 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 SLC10A6Q3KNW5 377 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 C6orf132Q5T0Z8 1188 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 FILIP1Q7Z7B0 1213 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 SFTPA1Q8IWL2 248 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms