RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C ADH3P07246 375 aaKnown RBP7.87□□□□□ -1.15
SSN3YPL042C INO4P13902 151 aa7.87□□□□□ -1.15
SSN3YPL042C NOP1P15646 327 aaKnown RBP7.87□□□□□ -1.15
SSN3YPL042C CCS1P40202 249 aaKnown RBP7.87□□□□□ -1.15
SSN3YPL042C YMR082CQ04276 118 aa7.87□□□□□ -1.15
SSN3YPL042C ARR3Q06598 404 aa7.87□□□□□ -1.15
SSN3YPL042C CSI2Q08054 341 aa7.87□□□□□ -1.15
SSN3YPL042C MPD1Q12404 318 aaKnown RBP7.87□□□□□ -1.15
SSN3YPL042C MIG1P27705 504 aa7.86□□□□□ -1.15
SSN3YPL042C SPT4P32914 102 aaPredicted RBP7.86□□□□□ -1.15
SSN3YPL042C SWM2P40342 146 aa7.86□□□□□ -1.15
SSN3YPL042C LOA1Q06508 300 aa7.86□□□□□ -1.15
SSN3YPL042C YOL160WQ08321 113 aa7.86□□□□□ -1.15
SSN3YPL042C YOR097CQ12274 175 aaPredicted RBP7.86□□□□□ -1.15
SSN3YPL042C YPS5P53057 165 aa7.86□□□□□ -1.15
SSN3YPL042C GEP7P53171 287 aa7.86□□□□□ -1.15
SSN3YPL042C AQY1P0CD91 305 aa7.85□□□□□ -1.15
SSN3YPL042C MRS3P10566 314 aa7.85□□□□□ -1.15
SSN3YPL042C RPB3P16370 318 aaKnown RBP7.85□□□□□ -1.15
SSN3YPL042C RPL16BP26785 198 aaKnown RBP7.85□□□□□ -1.15
SSN3YPL042C IMP1P28627 190 aa7.85□□□□□ -1.15
SSN3YPL042C GEP4P38812 185 aa7.85□□□□□ -1.15
SSN3YPL042C NCE103P53615 221 aa7.85□□□□□ -1.15
SSN3YPL042C YMR254CQ04838 102 aa7.85□□□□□ -1.15
SSN3YPL042C RFM1Q12192 310 aa7.85□□□□□ -1.15
SSN3YPL042C YIL134C-AQ45U18 67 aa7.85□□□□□ -1.15
SSN3YPL042C YLR365WQ7LIF2 110 aa7.85□□□□□ -1.15
SSN3YPL042C RPS23AP0CX29 145 aaKnown RBP7.84□□□□□ -1.15
SSN3YPL042C RPS23BP0CX30 145 aa7.84□□□□□ -1.15
SSN3YPL042C YFL065CP43539 102 aa7.84□□□□□ -1.15
SSN3YPL042C GAT3Q07928 141 aa7.84□□□□□ -1.15
SSN3YPL042C YPR203WQ08994 102 aa7.84□□□□□ -1.15
SSN3YPL042C SPO13P23624 291 aa7.83□□□□□ -1.16
SSN3YPL042C RPB7P34087 171 aa7.83□□□□□ -1.16
SSN3YPL042C ATG40Q99325 256 aa7.83□□□□□ -1.16
SSN3YPL042C ALK2P32789 676 aaPredicted RBP7.83□□□□□ -1.16
SSN3YPL042C RPL14AP36105 138 aaKnown RBP7.83□□□□□ -1.16
SSN3YPL042C SWD3P38123 315 aa7.83□□□□□ -1.16
SSN3YPL042C GPI2P46961 280 aa7.83□□□□□ -1.16
SSN3YPL042C YGR164WP53291 111 aa7.83□□□□□ -1.16
SSN3YPL042C SMM1P53720 384 aaKnown RBP7.83□□□□□ -1.16
SSN3YPL042C YDR215CQ12240 137 aa7.82□□□□□ -1.16
SSN3YPL042C YPR108W-AQ3E7B3 70 aa7.82□□□□□ -1.16
SSN3YPL042C YER175W-AQ8TGU4 54 aa7.82□□□□□ -1.16
SSN3YPL042C CUP1-1P0CX80 61 aa7.81□□□□□ -1.16
SSN3YPL042C CUP1-2P0CX81 61 aa7.81□□□□□ -1.16
SSN3YPL042C VMA11P32842 164 aa7.81□□□□□ -1.16
SSN3YPL042C APS1P35181 156 aa7.81□□□□□ -1.16
SSN3YPL042C FIP1P45976 327 aa7.81□□□□□ -1.16
SSN3YPL042C PRM3Q08931 133 aa7.81□□□□□ -1.16
SSN3YPL042C YPL162CQ12042 273 aa7.81□□□□□ -1.16
SSN3YPL042C YDR029WQ12111 104 aa7.81□□□□□ -1.16
SSN3YPL042C YNR034W-AQ3E841 98 aa7.81□□□□□ -1.16
SSN3YPL042C YAR029WP39549 74 aa7.8□□□□□ -1.16
SSN3YPL042C KEG1P43614 200 aa7.8□□□□□ -1.16
SSN3YPL042C YOR192C-CQ3E736 78 aa7.8□□□□□ -1.16
SSN3YPL042C YGR045CP53229 120 aa7.79□□□□□ -1.16
SSN3YPL042C SED1Q01589 338 aa7.79□□□□□ -1.16
SSN3YPL042C FIT1Q04433 528 aa7.79□□□□□ -1.16
SSN3YPL042C YPL264CQ08980 353 aa7.79□□□□□ -1.16
SSN3YPL042C SPG4Q04438 115 aa7.79□□□□□ -1.16
SSN3YPL042C YDR114CQ04597 100 aa7.79□□□□□ -1.16
SSN3YPL042C YOL118CQ08259 102 aa7.79□□□□□ -1.16
SSN3YPL042C YPR145C-AQ2V2P0 78 aa7.79□□□□□ -1.16
SSN3YPL042C PAM17P36147 197 aa7.78□□□□□ -1.16
SSN3YPL042C THG1P53215 237 aaKnown RBP7.78□□□□□ -1.16
SSN3YPL042C CYT2Q00873 224 aa7.78□□□□□ -1.16
SSN3YPL042C ANT1Q06497 328 aa7.78□□□□□ -1.16
SSN3YPL042C YPL229WQ99395 206 aa7.78□□□□□ -1.16
SSN3YPL042C MBF1O14467 151 aaKnown RBP7.77□□□□□ -1.17
SSN3YPL042C SPS100P13130 326 aa7.77□□□□□ -1.17
SSN3YPL042C CDC43P18898 376 aa7.77□□□□□ -1.17
SSN3YPL042C MTR2P34232 184 aaKnown RBP7.77□□□□□ -1.17
SSN3YPL042C TSC3Q3E790 80 aa7.77□□□□□ -1.17
SSN3YPL042C HUG1Q6Q5K6 68 aa7.77□□□□□ -1.17
SSN3YPL042C RPL39P04650 51 aa7.76□□□□□ -1.17
SSN3YPL042C ERG2P32352 222 aa7.76□□□□□ -1.17
SSN3YPL042C ATG8P38182 117 aaRIP-Chip data7.76□□□□□ -1.17not detected
SSN3YPL042C YJL213WP40896 331 aa7.76□□□□□ -1.17
SSN3YPL042C RRT7Q07829 113 aa7.76□□□□□ -1.17
SSN3YPL042C YOR292CQ08743 309 aa7.76□□□□□ -1.17
SSN3YPL042C SMD3P43321 101 aaKnown RBP7.76□□□□□ -1.17
SSN3YPL042C WWM1P43582 211 aaKnown RBP7.76□□□□□ -1.17
SSN3YPL042C YNL046WP53956 172 aa7.76□□□□□ -1.17
SSN3YPL042C RIM9Q04734 239 aa7.76□□□□□ -1.17
SSN3YPL042C YOL029CQ08187 201 aa7.76□□□□□ -1.17
SSN3YPL042C ECM12O13529 151 aa7.75□□□□□ -1.17
SSN3YPL042C UTR5P32630 166 aa7.75□□□□□ -1.17
SSN3YPL042C GAT4P40569 121 aa7.75□□□□□ -1.17
SSN3YPL042C PAU23Q07987 124 aa7.75□□□□□ -1.17
SSN3YPL042C PAU17Q12370 124 aa7.75□□□□□ -1.17
SSN3YPL042C YLR146W-AQ2V2P1 62 aa7.75□□□□□ -1.17
SSN3YPL042C YER134CP40081 178 aa7.74□□□□□ -1.17
SSN3YPL042C CWP2P43497 92 aa7.74□□□□□ -1.17
SSN3YPL042C GCV3P39726 170 aaPredicted RBP7.73□□□□□ -1.17
SSN3YPL042C NAT5Q08689 176 aa7.73□□□□□ -1.17
SSN3YPL042C SFT2P38166 215 aa7.73□□□□□ -1.17
SSN3YPL042C ASP1P38986 381 aaPredicted RBP7.73□□□□□ -1.17
SSN3YPL042C YER181CP40097 107 aa7.73□□□□□ -1.17
SSN3YPL042C KSH1Q8TGJ3 72 aa7.73□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms