RNA–Protein interactions for RNA: YDR170C

SEC7, Transcript of Guanine nucleotide exchange factor (GEF) for ADP ribosylation factors, yeastyeast

Gene SEC7, Length 6,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC7YDR170C SFT2P38166 215 aa2.38□□□□□ -2.03
SEC7YDR170C PTH1P38876 190 aaKnown RBP2.38□□□□□ -2.03
SEC7YDR170C FCF1Q05498 189 aaPredicted RBP2.38□□□□□ -2.03
SEC7YDR170C YPR071WQ12346 211 aa2.38□□□□□ -2.03
SEC7YDR170C RPL39P04650 51 aa2.37□□□□□ -2.03
SEC7YDR170C YBL059WP34224 193 aa2.37□□□□□ -2.03
SEC7YDR170C YER188WP40103 239 aa2.37□□□□□ -2.03
SEC7YDR170C RPL34BP40525 121 aaKnown RBP2.37□□□□□ -2.03
SEC7YDR170C LCL3P53153 274 aa2.37□□□□□ -2.03
SEC7YDR170C YPL014WQ02606 381 aa2.37□□□□□ -2.03
SEC7YDR170C HNT3Q08702 217 aa2.37□□□□□ -2.03
SEC7YDR170C YPR063CQ12160 140 aa2.37□□□□□ -2.03
SEC7YDR170C RPL18AP0CX49 186 aaKnown RBP2.37□□□□□ -2.03
SEC7YDR170C RPL18BP0CX50 186 aaKnown RBP2.37□□□□□ -2.03
SEC7YDR170C INO2P26798 304 aa2.37□□□□□ -2.03
SEC7YDR170C YBL071CP38185 102 aa2.37□□□□□ -2.03
SEC7YDR170C ECM33P38248 429 aaKnown RBP2.37□□□□□ -2.03
SEC7YDR170C YHL044WP38727 235 aa2.37□□□□□ -2.03
SEC7YDR170C POP2P39008 433 aa2.37□□□□□ -2.03
SEC7YDR170C GZF3P42944 551 aaKnown RBP2.37□□□□□ -2.03
SEC7YDR170C ATO3Q12359 275 aa2.37□□□□□ -2.03
SEC7YDR170C RPS22BQ3E7Y3 130 aaKnown RBP2.37□□□□□ -2.03
SEC7YDR170C CHO1P08456 276 aa2.37□□□□□ -2.03
SEC7YDR170C PCL2P25693 308 aa2.37□□□□□ -2.03
SEC7YDR170C RPB7P34087 171 aa2.37□□□□□ -2.03
SEC7YDR170C SYM1Q06563 197 aa2.37□□□□□ -2.03
SEC7YDR170C YRA1Q12159 226 aaKnown RBP2.37□□□□□ -2.03
SEC7YDR170C RPL28P02406 149 aaKnown RBP2.37□□□□□ -2.03
SEC7YDR170C MRP49P32388 137 aa2.37□□□□□ -2.03
SEC7YDR170C PRE3P38624 215 aa2.37□□□□□ -2.03
SEC7YDR170C YFL065CP43539 102 aa2.37□□□□□ -2.03
SEC7YDR170C YFR057WP43625 151 aa2.37□□□□□ -2.03
SEC7YDR170C RPL38P49167 78 aaKnown RBP2.37□□□□□ -2.03
SEC7YDR170C YOR385WQ08909 290 aa2.37□□□□□ -2.03
SEC7YDR170C YPR203WQ08994 102 aa2.37□□□□□ -2.03
SEC7YDR170C YPL162CQ12042 273 aa2.37□□□□□ -2.03
SEC7YDR170C YDR029WQ12111 104 aa2.37□□□□□ -2.03
SEC7YDR170C YPT10P38146 199 aa2.37□□□□□ -2.03
SEC7YDR170C CPD1P53314 239 aa2.37□□□□□ -2.03
SEC7YDR170C IZH3Q07959 543 aa2.37□□□□□ -2.03
SEC7YDR170C PAU23Q07987 124 aa2.37□□□□□ -2.03
SEC7YDR170C RFU1Q08003 200 aa2.37□□□□□ -2.03
SEC7YDR170C PAU17Q12370 124 aa2.37□□□□□ -2.03
SEC7YDR170C HEM4P06174 275 aa2.36□□□□□ -2.03
SEC7YDR170C YKL097CP34245 136 aa2.36□□□□□ -2.03
SEC7YDR170C GPP2P40106 250 aaKnown RBP2.36□□□□□ -2.03
SEC7YDR170C YDL218WQ07629 317 aa2.36□□□□□ -2.03
SEC7YDR170C POL2P21951 2222 aaKnown RBP2.36□□□□□ -2.03
SEC7YDR170C CPT1P17898 393 aa2.36□□□□□ -2.03
SEC7YDR170C YCR007CP25354 239 aa2.36□□□□□ -2.03
SEC7YDR170C PAU16P35994 123 aa2.36□□□□□ -2.03
SEC7YDR170C CCS1P40202 249 aaKnown RBP2.36□□□□□ -2.03
SEC7YDR170C YGR050CP53231 118 aa2.36□□□□□ -2.03
SEC7YDR170C MAP1Q01662 387 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
SEC7YDR170C UPS1Q05776 175 aa2.36□□□□□ -2.03
SEC7YDR170C YOP1Q12402 180 aa2.36□□□□□ -2.03
SEC7YDR170C RPL15AP05748 204 aaKnown RBP2.36□□□□□ -2.03
SEC7YDR170C PHO85P17157 305 aa2.36□□□□□ -2.03
SEC7YDR170C MDM10P18409 493 aa2.36□□□□□ -2.03
SEC7YDR170C RTG1P32607 177 aa2.36□□□□□ -2.03
SEC7YDR170C OST2P46964 130 aa2.36□□□□□ -2.03
SEC7YDR170C SUN4P53616 420 aa2.36□□□□□ -2.03
SEC7YDR170C YDR042CQ03205 200 aa2.36□□□□□ -2.03
SEC7YDR170C STP3Q05937 343 aa2.36□□□□□ -2.03
SEC7YDR170C YOR011W-AQ3E807 68 aa2.36□□□□□ -2.03
SEC7YDR170C MBB1P39534 108 aa2.36□□□□□ -2.03
SEC7YDR170C YNL200CP40165 246 aaKnown RBP2.36□□□□□ -2.03
SEC7YDR170C LST8P41318 303 aa2.36□□□□□ -2.03
SEC7YDR170C IGO1P53897 168 aa2.36□□□□□ -2.03
SEC7YDR170C AIM11P87275 137 aa2.36□□□□□ -2.03
SEC7YDR170C PIS1P06197 220 aaKnown RBP2.36□□□□□ -2.03
SEC7YDR170C NCA3P46955 337 aa2.36□□□□□ -2.03
SEC7YDR170C PIR5P46999 287 aa2.36□□□□□ -2.03
SEC7YDR170C TIM18Q08749 192 aa2.36□□□□□ -2.03
SEC7YDR170C YLR365WQ7LIF2 110 aa2.36□□□□□ -2.03
SEC7YDR170C OXA1P39952 402 aa2.35□□□□□ -2.03
SEC7YDR170C PRM5P40476 318 aa2.35□□□□□ -2.03
SEC7YDR170C PHS1P40857 217 aa2.35□□□□□ -2.03
SEC7YDR170C YDL157CQ12082 118 aa2.35□□□□□ -2.03
SEC7YDR170C YHR140WP38842 239 aa2.35□□□□□ -2.03
SEC7YDR170C MIG1P27705 504 aa2.35□□□□□ -2.03
SEC7YDR170C MRPL38P35996 138 aaPredicted RBP2.35□□□□□ -2.03
SEC7YDR170C SIP18P50263 79 aa2.35□□□□□ -2.03
SEC7YDR170C YGR035CP53222 116 aa2.35□□□□□ -2.03
SEC7YDR170C FCY1Q12178 158 aa2.35□□□□□ -2.03
SEC7YDR170C PBI2P0CT04 75 aaKnown RBP2.35□□□□□ -2.03
SEC7YDR170C ISF1P32488 338 aa2.35□□□□□ -2.03
SEC7YDR170C VPS55P47111 140 aa2.35□□□□□ -2.03
SEC7YDR170C YGL230CP53074 147 aa2.35□□□□□ -2.03
SEC7YDR170C TRS23Q03784 219 aa2.35□□□□□ -2.03
SEC7YDR170C NIP7Q08962 181 aaKnown RBP2.35□□□□□ -2.03
SEC7YDR170C YPR108W-AQ3E7B3 70 aa2.35□□□□□ -2.03
SEC7YDR170C TAO3P40468 2376 aa2.35□□□□□ -2.03
SEC7YDR170C CYC3P06182 269 aa2.34□□□□□ -2.03
SEC7YDR170C SRP21P32342 167 aa2.34□□□□□ -2.03
SEC7YDR170C IRC23Q08416 157 aa2.34□□□□□ -2.03
SEC7YDR170C MRPL23Q12487 163 aaPredicted RBP2.34□□□□□ -2.03
SEC7YDR170C YHR173CP38864 112 aa2.34□□□□□ -2.03
SEC7YDR170C YMR141CP40211 102 aa2.34□□□□□ -2.03
SEC7YDR170C DAP1Q12091 152 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 79.7 ms