RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C RPL23BP0CX42 137 aaKnown RBP2.83□□□□□ -1.96
OTU1YFL044C RPL16AP26784 199 aaKnown RBP2.83□□□□□ -1.96
OTU1YFL044C MRPL38P35996 138 aaPredicted RBP2.83□□□□□ -1.96
OTU1YFL044C FMP23P38231 175 aa2.83□□□□□ -1.96
OTU1YFL044C ECM33P38248 429 aaKnown RBP2.83□□□□□ -1.96
OTU1YFL044C VMA22P38784 181 aa2.83□□□□□ -1.96
OTU1YFL044C HAC1P41546 238 aa2.83□□□□□ -1.96
OTU1YFL044C HAM1P47119 197 aaKnown RBP2.83□□□□□ -1.96
OTU1YFL044C HCH1P53834 153 aa2.83□□□□□ -1.96
OTU1YFL044C CWC25P53854 179 aaKnown RBP2.83□□□□□ -1.96
OTU1YFL044C MAK3Q03503 176 aa2.83□□□□□ -1.96
OTU1YFL044C TSA2Q04120 196 aa2.83□□□□□ -1.96
OTU1YFL044C VBA1Q04301 562 aa2.83□□□□□ -1.96
OTU1YFL044C COA4Q05809 96 aa2.83□□□□□ -1.96
OTU1YFL044C BER1Q06688 274 aaKnown RBP2.83□□□□□ -1.96
OTU1YFL044C RAD28Q12021 506 aa2.83□□□□□ -1.96
OTU1YFL044C MED4Q12343 284 aa2.83□□□□□ -1.96
OTU1YFL044C YER078W-AQ3E7A2 54 aa2.83□□□□□ -1.96
OTU1YFL044C RPS18AP0CX55 146 aaKnown RBP2.82□□□□□ -1.96
OTU1YFL044C RPS18BP0CX56 146 aaPredicted RBP2.82□□□□□ -1.96
OTU1YFL044C SEN2P16658 377 aa2.82□□□□□ -1.96
OTU1YFL044C OTU1P43558 301 aa2.82□□□□□ -1.96
OTU1YFL044C YPI1P43587 155 aa2.82□□□□□ -1.96
OTU1YFL044C ATG18P43601 500 aa2.82□□□□□ -1.96
OTU1YFL044C YGR042WP53227 271 aa2.82□□□□□ -1.96
OTU1YFL044C CPD1P53314 239 aa2.82□□□□□ -1.96
OTU1YFL044C FSH2Q05015 223 aa2.82□□□□□ -1.96
OTU1YFL044C PEX10Q05568 337 aa2.82□□□□□ -1.96
OTU1YFL044C KEI1Q06346 221 aa2.82□□□□□ -1.96
OTU1YFL044C HUG1Q6Q5K6 68 aa2.82□□□□□ -1.96
OTU1YFL044C ARG80P07249 177 aa2.81□□□□□ -1.96
OTU1YFL044C NOP1P15646 327 aaKnown RBP2.81□□□□□ -1.96
OTU1YFL044C MRS4P23500 304 aa2.81□□□□□ -1.96
OTU1YFL044C MIR1P23641 311 aaKnown RBP2.81□□□□□ -1.96
OTU1YFL044C FMT1P32785 401 aa2.81□□□□□ -1.96
OTU1YFL044C MRPL27P36526 146 aaPredicted RBP2.81□□□□□ -1.96
OTU1YFL044C YBR242WP38331 238 aa2.81□□□□□ -1.96
OTU1YFL044C KRE9P39005 276 aa2.81□□□□□ -1.96
OTU1YFL044C GVP36P40531 326 aaKnown RBP2.81□□□□□ -1.96
OTU1YFL044C LST8P41318 303 aa2.81□□□□□ -1.96
OTU1YFL044C YAR1P46683 200 aa2.81□□□□□ -1.96
OTU1YFL044C MST27P53176 234 aa2.81□□□□□ -1.96
OTU1YFL044C SSU72P53538 206 aaPredicted RBP2.81□□□□□ -1.96
OTU1YFL044C TAR1Q8TGM6 124 aa2.81□□□□□ -1.96
OTU1YFL044C SOD1P00445 154 aaKnown RBP2.8□□□□□ -1.96
OTU1YFL044C RPL31AP0C2H8 113 aaKnown RBP2.8□□□□□ -1.96
OTU1YFL044C TRR1P29509 319 aaKnown RBP2.8□□□□□ -1.96
OTU1YFL044C NRG2P38082 220 aa2.8□□□□□ -1.96
OTU1YFL044C YPC1P38298 316 aa2.8□□□□□ -1.96
OTU1YFL044C YPT31P38555 223 aaKnown RBP2.8□□□□□ -1.96
OTU1YFL044C DOG2P38773 246 aa2.8□□□□□ -1.96
OTU1YFL044C DOG1P38774 246 aa2.8□□□□□ -1.96
OTU1YFL044C PDS1P40316 373 aaPredicted RBP2.8□□□□□ -1.96
OTU1YFL044C ALG13P53178 202 aa2.8□□□□□ -1.96
OTU1YFL044C CAX4P53223 239 aa2.8□□□□□ -1.96
OTU1YFL044C GIM3P53900 129 aa2.8□□□□□ -1.96
OTU1YFL044C YML018CQ03730 393 aa2.8□□□□□ -1.96
OTU1YFL044C RDS3Q06835 107 aaPredicted RBP2.8□□□□□ -1.96
OTU1YFL044C IRC23Q08416 157 aa2.8□□□□□ -1.96
OTU1YFL044C POM33Q12164 279 aa2.8□□□□□ -1.96
OTU1YFL044C ATG31Q12421 196 aa2.8□□□□□ -1.96
OTU1YFL044C LSO2Q3E772 92 aaKnown RBP2.8□□□□□ -1.96
OTU1YFL044C PET20Q99373 253 aa2.8□□□□□ -1.96
OTU1YFL044C YCR016WP25617 290 aaKnown RBP2.79□□□□□ -1.96
OTU1YFL044C HOM6P31116 359 aaKnown RBP2.79□□□□□ -1.96
OTU1YFL044C SUA5P32579 426 aa2.79□□□□□ -1.96
OTU1YFL044C UTP11P34247 250 aaPredicted RBP2.79□□□□□ -1.96
OTU1YFL044C HTD2P38790 280 aaKnown RBP2.79□□□□□ -1.96
OTU1YFL044C PEX22P39718 180 aa2.79□□□□□ -1.96
OTU1YFL044C YER085CP40058 173 aa2.79□□□□□ -1.96
OTU1YFL044C YER137CP40083 148 aaKnown RBP2.79□□□□□ -1.96
OTU1YFL044C LSM1P47017 172 aaKnown RBP2.79□□□□□ -1.96
OTU1YFL044C BNS1P50084 137 aa2.79□□□□□ -1.96
OTU1YFL044C ARO8P53090 500 aaKnown RBP2.79□□□□□ -1.96
OTU1YFL044C ERV29P53337 310 aa2.79□□□□□ -1.96
OTU1YFL044C COX12Q01519 83 aa2.79□□□□□ -1.96
OTU1YFL044C PBA1Q05778 276 aa2.79□□□□□ -1.96
OTU1YFL044C ATG39Q06159 398 aa2.79□□□□□ -1.96
OTU1YFL044C SYM1Q06563 197 aa2.79□□□□□ -1.96
OTU1YFL044C ATP16Q12165 160 aa2.79□□□□□ -1.96
OTU1YFL044C UTP23Q12339 254 aaKnown RBP2.79□□□□□ -1.96
OTU1YFL044C YGL258W-AQ3E740 77 aa2.79□□□□□ -1.96
OTU1YFL044C YAR068WP39564 161 aa2.78□□□□□ -1.96
OTU1YFL044C POR2P40478 281 aa2.78□□□□□ -1.96
OTU1YFL044C YFR057WP43625 151 aa2.78□□□□□ -1.96
OTU1YFL044C ARP3P47117 449 aaKnown RBP2.78□□□□□ -1.96
OTU1YFL044C TDA4P47153 279 aa2.78□□□□□ -1.96
OTU1YFL044C GIS2P53849 153 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
OTU1YFL044C SWT21P53873 357 aaPredicted RBP2.78□□□□□ -1.96
OTU1YFL044C FYV6P53913 173 aa2.78□□□□□ -1.96
OTU1YFL044C SDO1Q07953 250 aaKnown RBP2.78□□□□□ -1.96
OTU1YFL044C YLR031WQ07978 186 aa2.78□□□□□ -1.96
OTU1YFL044C SCP1Q08873 200 aa2.78□□□□□ -1.96
OTU1YFL044C YOR385WQ08909 290 aa2.78□□□□□ -1.96
OTU1YFL044C YPR013CQ12145 317 aa2.78□□□□□ -1.96
OTU1YFL044C MSH5Q12175 901 aa2.78□□□□□ -1.96
OTU1YFL044C ERV2Q12284 196 aa2.78□□□□□ -1.96
OTU1YFL044C SUS1Q6WNK7 96 aa2.78□□□□□ -1.96
OTU1YFL044C HHF1P02309 103 aaKnown RBP2.77□□□□□ -1.97
OTU1YFL044C RPL24BP24000 155 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 100.2 ms