RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C NOP1P15646 327 aaKnown RBP2.79□□□□□ -1.96
VPS53YJL029C MRPL38P35996 138 aaPredicted RBP2.79□□□□□ -1.96
VPS53YJL029C DOG2P38773 246 aa2.79□□□□□ -1.96
VPS53YJL029C DOG1P38774 246 aa2.79□□□□□ -1.96
VPS53YJL029C TOS8P53147 276 aa2.79□□□□□ -1.96
VPS53YJL029C CWC25P53854 179 aaKnown RBP2.79□□□□□ -1.96
VPS53YJL029C PEX10Q05568 337 aa2.79□□□□□ -1.96
VPS53YJL029C IES3Q12345 250 aa2.79□□□□□ -1.96
VPS53YJL029C ERV1P27882 189 aa2.79□□□□□ -1.96
VPS53YJL029C YPI1P43587 155 aa2.79□□□□□ -1.96
VPS53YJL029C EST3Q03096 181 aa2.79□□□□□ -1.96
VPS53YJL029C AEP3Q12089 606 aa2.79□□□□□ -1.96
VPS53YJL029C RDI1Q12434 202 aa2.79□□□□□ -1.96
VPS53YJL029C YCP4P25349 247 aaKnown RBP2.78□□□□□ -1.96
VPS53YJL029C ALK2P32789 676 aaPredicted RBP2.78□□□□□ -1.96
VPS53YJL029C RPS0AP32905 252 aaKnown RBP2.78□□□□□ -1.96
VPS53YJL029C COS8P38723 381 aa2.78□□□□□ -1.96
VPS53YJL029C DUO1P53168 247 aaKnown RBP2.78□□□□□ -1.96
VPS53YJL029C YGR050CP53231 118 aa2.78□□□□□ -1.96
VPS53YJL029C NRG1Q03125 231 aa2.78□□□□□ -1.96
VPS53YJL029C YLR281CQ05863 155 aa2.78□□□□□ -1.96
VPS53YJL029C PBP4Q07362 185 aaKnown RBP2.78□□□□□ -1.96
VPS53YJL029C YPL264CQ08980 353 aa2.78□□□□□ -1.96
VPS53YJL029C YDR157WA0A023PZE8 133 aa2.78□□□□□ -1.96
VPS53YJL029C ACP1P32463 125 aa2.78□□□□□ -1.96
VPS53YJL029C YIL077CP40508 320 aa2.78□□□□□ -1.96
VPS53YJL029C MSO1P53604 210 aaKnown RBP2.78□□□□□ -1.96
VPS53YJL029C YIF1P53845 314 aaKnown RBP2.78□□□□□ -1.96
VPS53YJL029C TFB5Q3E7C1 72 aaPredicted RBP2.78□□□□□ -1.96
VPS53YJL029C SOD1P00445 154 aaKnown RBP2.77□□□□□ -1.97
VPS53YJL029C YKL162CP36052 402 aa2.77□□□□□ -1.97
VPS53YJL029C HXT14P42833 540 aa2.77□□□□□ -1.97
VPS53YJL029C YLR224WQ05947 369 aa2.77□□□□□ -1.97
VPS53YJL029C DCS1Q06151 350 aa2.77□□□□□ -1.97
VPS53YJL029C YBR255C-AQ3E776 120 aa2.77□□□□□ -1.97
VPS53YJL029C PET494P07390 489 aaPredicted RBP2.77□□□□□ -1.97
VPS53YJL029C YBL071CP38185 102 aa2.77□□□□□ -1.97
VPS53YJL029C RRT1P38192 103 aa2.77□□□□□ -1.97
VPS53YJL029C SLM6P38343 150 aa2.77□□□□□ -1.97
VPS53YJL029C YPT31P38555 223 aaKnown RBP2.77□□□□□ -1.97
VPS53YJL029C NSA2P40078 261 aaKnown RBP2.77□□□□□ -1.97
VPS53YJL029C YKE4P40544 346 aa2.77□□□□□ -1.97
VPS53YJL029C SWT21P53873 357 aaPredicted RBP2.77□□□□□ -1.97
VPS53YJL029C GPI15P53961 229 aa2.77□□□□□ -1.97
VPS53YJL029C YDR274CP87283 123 aa2.77□□□□□ -1.97
VPS53YJL029C VPS28Q02767 242 aa2.77□□□□□ -1.97
VPS53YJL029C FRQ1Q06389 190 aa2.77□□□□□ -1.97
VPS53YJL029C IZH3Q07959 543 aa2.77□□□□□ -1.97
VPS53YJL029C YOR352WQ08816 343 aa2.77□□□□□ -1.97
VPS53YJL029C CYC3P06182 269 aa2.76□□□□□ -1.97
VPS53YJL029C POP5P28005 173 aa2.76□□□□□ -1.97
VPS53YJL029C FLO5P38894 1075 aa2.76□□□□□ -1.97
VPS53YJL029C SWM2P40342 146 aa2.76□□□□□ -1.97
VPS53YJL029C POR2P40478 281 aa2.76□□□□□ -1.97
VPS53YJL029C DFG10P40526 253 aa2.76□□□□□ -1.97
VPS53YJL029C WWM1P43582 211 aaKnown RBP2.76□□□□□ -1.97
VPS53YJL029C CPD1P53314 239 aa2.76□□□□□ -1.97
VPS53YJL029C TIM18Q08749 192 aa2.76□□□□□ -1.97
VPS53YJL029C YJR112W-AQ3E743 109 aa2.76□□□□□ -1.97
VPS53YJL029C YPT10P38146 199 aa2.76□□□□□ -1.97
VPS53YJL029C YAR068WP39564 161 aa2.76□□□□□ -1.97
VPS53YJL029C SDH7Q04401 133 aa2.76□□□□□ -1.97
VPS53YJL029C YLR179CQ06252 201 aaKnown RBP2.76□□□□□ -1.97
VPS53YJL029C RXT3Q07458 294 aa2.76□□□□□ -1.97
VPS53YJL029C LDS2Q08218 356 aa2.76□□□□□ -1.97
VPS53YJL029C FEX1Q08913 375 aa2.76□□□□□ -1.97
VPS53YJL029C FEX2Q08991 375 aa2.76□□□□□ -1.97
VPS53YJL029C ATG5Q12380 294 aa2.76□□□□□ -1.97
VPS53YJL029C AGC1Q12482 902 aa2.76□□□□□ -1.97
VPS53YJL029C TPI1P00942 248 aaKnown RBP2.75□□□□□ -1.97
VPS53YJL029C YPS1P32329 569 aa2.75□□□□□ -1.97
VPS53YJL029C CSH1P38287 376 aa2.75□□□□□ -1.97
VPS53YJL029C BDH1P39714 382 aa2.75□□□□□ -1.97
VPS53YJL029C RTS2P40962 232 aa2.75□□□□□ -1.97
VPS53YJL029C UBC11P52492 156 aa2.75□□□□□ -1.97
VPS53YJL029C HCH1P53834 153 aa2.75□□□□□ -1.97
VPS53YJL029C YMR090WQ04304 227 aaKnown RBP2.75□□□□□ -1.97
VPS53YJL029C GRH1Q04410 372 aaKnown RBP2.75□□□□□ -1.97
VPS53YJL029C ATG39Q06159 398 aa2.75□□□□□ -1.97
VPS53YJL029C YHR213W-AQ8TGT4 77 aa2.75□□□□□ -1.97
VPS53YJL029C SNF11P38956 169 aa2.75□□□□□ -1.97
VPS53YJL029C SYG1P40528 902 aa2.75□□□□□ -1.97
VPS53YJL029C AGX1P43567 385 aa2.75□□□□□ -1.97
VPS53YJL029C PDR17P53844 350 aa2.75□□□□□ -1.97
VPS53YJL029C FYV6P53913 173 aa2.75□□□□□ -1.97
VPS53YJL029C ACT1P60010 375 aaKnown RBP2.75□□□□□ -1.97
VPS53YJL029C AIM45Q12480 344 aaKnown RBP2.75□□□□□ -1.97
VPS53YJL029C SAS2P40963 338 aa2.74□□□□□ -1.97
VPS53YJL029C TDA4P47153 279 aa2.74□□□□□ -1.97
VPS53YJL029C YGR018CP53211 109 aa2.74□□□□□ -1.97
VPS53YJL029C TIM44Q01852 431 aa2.74□□□□□ -1.97
VPS53YJL029C RRG8Q06109 277 aa2.74□□□□□ -1.97
VPS53YJL029C BER1Q06688 274 aaKnown RBP2.74□□□□□ -1.97
VPS53YJL029C YPL162CQ12042 273 aa2.74□□□□□ -1.97
VPS53YJL029C RPP2AP05319 106 aaKnown RBP2.74□□□□□ -1.97
VPS53YJL029C MDM10P18409 493 aa2.74□□□□□ -1.97
VPS53YJL029C SEC22P22214 214 aa2.74□□□□□ -1.97
VPS53YJL029C QDR3P38227 689 aa2.74□□□□□ -1.97
VPS53YJL029C RRF1P38771 230 aa2.74□□□□□ -1.97
VPS53YJL029C WSS1P38838 269 aa2.74□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms