Protein–RNA interactions for Protein: P38287

CSH1, Mannosyl phosphorylinositol ceramide synthase CSH1, yeastyeast

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CSH1P38287 NSR1YGR159C 1245 nt16.24■□□□□ 0.19
CSH1P38287 YML009W-BYML009W-B 477 nt16.1■□□□□ 0.17
CSH1P38287 NOP1YDL014W 984 nt15.56■□□□□ 0.08
CSH1P38287 MDJ1YFL016C 1536 nt14.66□□□□□ -0.06
CSH1P38287 YKL036CYKL036C 393 nt14.08□□□□□ -0.16
CSH1P38287 SRX1YKL086W 384 nt13.57□□□□□ -0.24
CSH1P38287 YJL027CYJL027C 417 nt13.54□□□□□ -0.24
CSH1P38287 Q0297Q0297 156 nt13.49□□□□□ -0.25
CSH1P38287 YCR051WYCR051W 669 nt12.89□□□□□ -0.35
CSH1P38287 DBP2YNL112W 1641 nt12.84□□□□□ -0.35
CSH1P38287 SCS3YGL126W 1143 nt12.63□□□□□ -0.39
CSH1P38287 YBR190WYBR190W 312 nt12.59□□□□□ -0.39
CSH1P38287 TRN1tP(UGG)A 72 nt12.4□□□□□ -0.42
CSH1P38287 SUF9tP(UGG)F 72 nt12.4□□□□□ -0.42
CSH1P38287 SUF8tP(UGG)H 72 nt12.4□□□□□ -0.42
CSH1P38287 tP(UGG)LtP(UGG)L 72 nt12.4□□□□□ -0.42
CSH1P38287 SUF7tP(UGG)M 72 nt12.4□□□□□ -0.42
CSH1P38287 tP(UGG)N1tP(UGG)N1 72 nt12.4□□□□□ -0.42
CSH1P38287 tP(UGG)N2tP(UGG)N2 72 nt12.4□□□□□ -0.42
CSH1P38287 tP(UGG)O1tP(UGG)O1 72 nt12.4□□□□□ -0.42
CSH1P38287 SUF11tP(UGG)O2 72 nt12.4□□□□□ -0.42
CSH1P38287 CCC1YLR220W 969 nt12.35□□□□□ -0.43
CSH1P38287 RTC3YHR087W 336 nt12.34□□□□□ -0.43
CSH1P38287 YOL085CYOL085C 342 nt12.19□□□□□ -0.46
CSH1P38287 RPP1BYDL130W 321 nt12.11□□□□□ -0.47
CSH1P38287 RVS167YDR388W 1449 nt12.07□□□□□ -0.48
CSH1P38287 PKP1YIL042C 1185 nt12.06□□□□□ -0.48
CSH1P38287 SCJ1YMR214W 1134 nt11.87□□□□□ -0.51
CSH1P38287 SSA3YBL075C 1950 nt11.81□□□□□ -0.52
CSH1P38287 tP(UGG)O3tP(UGG)O3 72 nt11.68□□□□□ -0.54
CSH1P38287 PUT4YOR348C 1884 nt11.62□□□□□ -0.55
CSH1P38287 PET122YER153C 765 nt11.59□□□□□ -0.55
CSH1P38287 SHR5YOL110W 714 nt11.55□□□□□ -0.56
CSH1P38287 SCR1SCR1 522 nt11.45□□□□□ -0.58
CSH1P38287 URN1YPR152C 1398 nt11.42□□□□□ -0.58
CSH1P38287 DEP1YAL013W 1218 nt11.35□□□□□ -0.59
CSH1P38287 ARE1YCR048W 1833 nt11.33□□□□□ -0.6
CSH1P38287 SAH1YER043C 1350 nt11.31□□□□□ -0.6
CSH1P38287 OPI9YLR338W 858 nt11.29□□□□□ -0.6
CSH1P38287 YDJ1YNL064C 1230 nt11.28□□□□□ -0.6
CSH1P38287 POA1YBR022W 534 nt11.28□□□□□ -0.6
CSH1P38287 RRN5YLR141W 1092 nt11.26□□□□□ -0.61
CSH1P38287 ATS1YAL020C 1002 nt11.24□□□□□ -0.61
CSH1P38287 YHR049C-AYHR049C-A 297 nt11.19□□□□□ -0.62
CSH1P38287 RPN10YHR200W 807 nt11.19□□□□□ -0.62
CSH1P38287 YNL208WYNL208W 600 nt11.13□□□□□ -0.63
CSH1P38287 GAR1YHR089C 618 nt11.11□□□□□ -0.63
CSH1P38287 BSC6YOL137W 1494 nt11.05□□□□□ -0.64
CSH1P38287 YER088W-BYER088W-B 147 nt11.02□□□□□ -0.65
CSH1P38287 PUN1YLR414C 792 nt10.97□□□□□ -0.65
CSH1P38287 BUD23YCR047C 828 nt10.96□□□□□ -0.65
CSH1P38287 RSB1YOR049C 1065 nt10.95□□□□□ -0.66
CSH1P38287 PTC2YER089C 1395 nt10.9□□□□□ -0.67
CSH1P38287 YJR018WYJR018W 363 nt10.88□□□□□ -0.67
CSH1P38287 NAB2YGL122C 1578 nt10.8□□□□□ -0.68
CSH1P38287 TIR1YER011W 765 nt10.73□□□□□ -0.69
CSH1P38287 SPT5YML010W 3192 nt10.69□□□□□ -0.7
CSH1P38287 SSA1YAL005C 1929 nt10.65□□□□□ -0.7
CSH1P38287 RPP2BYDR382W 333 nt10.61□□□□□ -0.71
CSH1P38287 FPR4YLR449W 1179 nt10.6□□□□□ -0.71
CSH1P38287 DAL1YIR027C 1383 nt10.59□□□□□ -0.71
CSH1P38287 YJR120WYJR120W 351 nt10.57□□□□□ -0.72
CSH1P38287 INM2YDR287W 879 nt10.54□□□□□ -0.72
CSH1P38287 FIS1YIL065C 468 nt10.54□□□□□ -0.72
CSH1P38287 SSA4YER103W 1929 nt10.47□□□□□ -0.73
CSH1P38287 PHO4YFR034C 939 nt10.47□□□□□ -0.73
CSH1P38287 PST2YDR032C 597 nt10.45□□□□□ -0.74
CSH1P38287 MEP2YNL142W 1500 nt10.4□□□□□ -0.74
CSH1P38287 YBL100CYBL100C 315 nt10.38□□□□□ -0.75
CSH1P38287 YPS1YLR120C 1710 nt10.38□□□□□ -0.75
CSH1P38287 SRB2YHR041C 633 nt10.37□□□□□ -0.75
CSH1P38287 BDH2YAL061W 1254 nt10.32□□□□□ -0.76
CSH1P38287 YHR165W-AYHR165W-A 312 nt10.31□□□□□ -0.76
CSH1P38287 FUN26YAL022C 1554 nt10.24□□□□□ -0.77
CSH1P38287 YDR095CYDR095C 411 nt10.24□□□□□ -0.77
CSH1P38287 DCW1YKL046C 1350 nt10.23□□□□□ -0.77
CSH1P38287 TRM9YML014W 840 nt10.22□□□□□ -0.77
CSH1P38287 WWM1YFL010C 636 nt10.21□□□□□ -0.77
CSH1P38287 ALF1YNL148C 765 nt10.18□□□□□ -0.78
CSH1P38287 LSM3YLR438C-A 270 nt10.15□□□□□ -0.78
CSH1P38287 YMR090WYMR090W 684 nt10.11□□□□□ -0.79
CSH1P38287 EMI2YDR516C 1503 nt10.11□□□□□ -0.79
CSH1P38287 SHU1YHL006C 453 nt10.09□□□□□ -0.79
CSH1P38287 BDF1YLR399C 2061 nt10.08□□□□□ -0.8
CSH1P38287 RPP2AYOL039W 321 nt10.08□□□□□ -0.8
CSH1P38287 CCT6YDR188W 1641 nt10.07□□□□□ -0.8
CSH1P38287 YGR021WYGR021W 873 nt10.06□□□□□ -0.8
CSH1P38287 YAL037C-BYAL037C-B 975 nt10.06□□□□□ -0.8
CSH1P38287 YFL021C-AYFL021C-A 855 nt10.04□□□□□ -0.8
CSH1P38287 SUF2tP(AGG)C 72 nt10.04□□□□□ -0.8
CSH1P38287 SUF10tP(AGG)N 72 nt10.04□□□□□ -0.8
CSH1P38287 PTP1YDL230W 1008 nt10.03□□□□□ -0.8
CSH1P38287 CAC2YML102W 1407 nt10.02□□□□□ -0.81
CSH1P38287 SIS1YNL007C 1059 nt10□□□□□ -0.81
CSH1P38287 YDL221WYDL221W 552 nt9.99□□□□□ -0.81
CSH1P38287 HOM6YJR139C 1080 nt9.99□□□□□ -0.81
CSH1P38287 YBR220CYBR220C 1683 nt9.99□□□□□ -0.81
CSH1P38287 TAT1YBR069C 1860 nt9.96□□□□□ -0.82
CSH1P38287 RDN37-1RDN37-1 5354 nt9.95□□□□□ -0.82
CSH1P38287 RDN37-2RDN37-2 5354 nt9.95□□□□□ -0.82
Retrieved 100 of 7,029 protein–RNA pairs in 67.5 ms